KEGG   Amycolatopsis mediterranei U32: AMED_0763
Entry
AMED_0763         CDS       T01269                                 
Symbol
groE
Name
(GenBank) chaperonin GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
amd  Amycolatopsis mediterranei U32
Pathway
amd03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:amd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AMED_0763 (groE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:amd03019]
    AMED_0763 (groE)
   03110 Chaperones and folding catalysts [BR:amd03110]
    AMED_0763 (groE)
   03029 Mitochondrial biogenesis [BR:amd03029]
    AMED_0763 (groE)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:amd04147]
    AMED_0763 (groE)
Enzymes [BR:amd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     AMED_0763 (groE)
Messenger RNA biogenesis [BR:amd03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     AMED_0763 (groE)
Chaperones and folding catalysts [BR:amd03110]
 Heat shock proteins
  HSP60 / Chaperonin
   AMED_0763 (groE)
Mitochondrial biogenesis [BR:amd03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    AMED_0763 (groE)
Exosome [BR:amd04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   AMED_0763 (groE)
  Exosomal proteins of other body fluids (saliva and urine)
   AMED_0763 (groE)
  Exosomal proteins of breast cancer cells
   AMED_0763 (groE)
  Exosomal proteins of colorectal cancer cells
   AMED_0763 (groE)
  Exosomal proteins of bladder cancer cells
   AMED_0763 (groE)
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: ADJ42583
UniProt: A0A0H3CW97
Position
819549..821162
AA seq 537 aa
MPKQIKFDEDARRALERGVNKLADAVKVTLGPRGRHVVLDKKFGGPTITLDGVTVAREIE
LDDPFENLGAQLAKSVATKTNDVAGDGTTTATVLAQSLVKVGLRNVAAGANPSAIGRGIE
AAAEKVIEILKAKATPVKGRENIAQVGTVTSRDANIGALLGEAVEKVGEDGVITIEESST
LATELVITEGVQFDKGFLSAHFATNPEEQKAILEDAYILLVREKISSLAELLPVLEKVVE
AKKPLLIIAEDVDGEALSTLVVNSLRKTITAVAVKAPFFGDRRKAFLDDLAVVTGGEVIS
AEIGRKLSDVDLGALGKARRIVVTKDDTTIVDGDGTKDAISGRIAQIRKEIETTDSDWDR
EKLQERLAKLGGGVAVIKVGAATETELNERKHRIEDAVAATKAAVEEGILPGGGSALVHA
VKELEGGLGLSGDEATGVRIVKDALTAPLFWIATNAGHEGAVIVNKVQEQGWGQGFNAAT
GELTDLLAAGIVDPVKVTRSAVANAASIARLVLTTESSVVEKPADEEPAGAGHGHSH
NT seq 1614 nt   +upstreamnt  +downstreamnt
atgcccaagcagatcaaattcgacgaggacgctcgtcgcgcactcgagcgcggggtgaac
aagctcgccgacgcggtcaaggtcactctcggcccgcgcggtcgccacgtcgtgctcgac
aagaagttcggcgggccgaccatcaccctcgacggcgtgaccgtcgcccgtgagatcgag
ctcgacgacccgttcgagaacctcggcgcccagctcgccaagagcgtcgccaccaagacc
aacgacgtcgcgggtgacggcaccacgaccgcgaccgtgctcgcgcagtcgctggtgaag
gtcggcctgcgcaacgtcgccgccggcgccaacccctcggcgatcggccgcggcatcgaa
gccgccgcggagaaggtcatcgagatcctcaaggccaaggccacgccggtcaagggccgc
gagaacatcgcccaggtcggcaccgtgacctcgcgtgacgccaacatcggcgccctgctc
ggcgaagccgtcgagaaggtcggcgaagacggcgtcatcaccatcgaggagtcgtcgacc
ctggcgaccgagctggtgatcaccgagggcgtccagttcgacaagggcttcctctcggcg
cacttcgcgaccaacccggaggagcagaaggcgatcctcgaggacgcctacatcctgctc
gtccgcgagaagatctcgtcgctggccgagctgctgccggtgctcgagaaggtcgtcgag
gccaagaagccgctgctgatcatcgccgaggacgtcgacggcgaggcgctgtccaccctc
gtggtgaactcgctgcgcaagacgatcaccgcggtcgccgtcaaggcgccgttcttcggt
gaccgccgcaaggcgttcctggacgacctcgcggtcgtcaccggcggcgaggtgatctcc
gcggagatcggccgcaagctgtccgacgtcgacctcggcgcgctgggcaaggcccgccgc
atcgtcgtcaccaaggacgacaccacgatcgtcgacggcgacggcaccaaggacgccatc
tccgggcggatcgcgcagatccgcaaggagatcgagacgaccgactccgactgggaccgc
gagaagctgcaggagcggctcgcgaagctcggcggcggtgtcgcggtgatcaaggtcggc
gcggccaccgagaccgagctgaacgagcgcaagcaccgcatcgaggacgccgtggccgcg
accaaggcggccgtcgaagagggcatcctgcccggcggcggttcggcgctggtgcacgcg
gtcaaggagctcgagggcggcctcggcctctccggcgacgaagcgaccggtgtccggatc
gtcaaggacgcgctgacggcgccgctgttctggatcgcgaccaacgcgggccacgagggc
gcggtcatcgtcaacaaggtgcaggagcagggctgggggcagggcttcaacgccgccacc
ggcgagctgaccgacctgctggccgccggcatcgtcgacccggtcaaggtgacccggtcc
gcggtggcgaacgccgcctccatcgcccggctggtgctgaccacggagtcgtccgtggtc
gagaagccggccgacgaggagcccgcaggcgcgggccacggccactcgcactga

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (16)   

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