KEGG   Apis mellifera (honey bee): 552752
Entry
552752            CDS       T01057                                 
Name
(RefSeq) symplekin isoform X1
  KO
K06100  symplekin
Organism
ame  Apis mellifera (honey bee)
Pathway
ame03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ame00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    552752
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ame03021]
    552752
   03019 Messenger RNA biogenesis [BR:ame03019]
    552752
Transcription machinery [BR:ame03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     552752
Messenger RNA biogenesis [BR:ame03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     552752
    U7-dependent histone pre-mRNA processing factors
     552752
SSDB
Motif
Pfam: Symplekin_C SYMPK_PTA1_N Atrophin-1
Other DBs
NCBI-GeneID: 552752
NCBI-ProteinID: XP_026299444
BEEBASE: GB43186
UniProt: A0A7M7MQD3
Position
LG11:15657388..15663388
AA seq 1113 aa
MDPRIHRRSEPEKGPGDLIVEWLNEASLNPGEDIKVTNLCKVQEILINKEPQLLPLYLDE
ALQFSLDRYAEVRKTITGFIEEAGVKQPEVIPRVVQILLRLVSDESSAVAKRALRASGRI
LRAALKWISSATTVTAEMEVAWNQLSALKIQIINMIDSDNDGIRTQAVKFLEGVVLIQTY
PDPDIPKKADDFSLEDIPLTLKIARRRKLEEEANDVMDLLIKFHGSPHVSSVNLMTCMGS
LALIAKTRPQFMPGVIQALQRLQHDLPPTLSDSQVTSVQKQLKLTLLGLMKHPASIEFVS
IIAKQLTQLGAKEQEILKAYPKPEDIRRMKKRQQVKEAAASSAAKRVKIETSLVSDESEI
VPSLIPTSKLSELIELSESFIAERLSVEIATDLVMDSMAWVPDTMTAIFQREYQPTSTTD
INIQRQTIAKLLATQIKQAKTKKKKDAKDEDAVMEDLVKNPTISVAEAKRERKREKDREK
EKEARASLEAHEKSLAKTRTRLKALKLSEVTKPLSKEVKEKMLLMAVNRILLSEKTAVFG
GVAAIRSKILTTLAATFNPYIKEAVLHYITDDMRNRLDLALGWLYEEYALLQGFQRRTTL
CTKPQEAPHQAYNFLLCTLVSAIDLVQGKDRDTLLYRLYLEAPLITEDAVEALKMVSSDE
TRGLVPLQLLKEMVIRRPTKQLVFLNVLLCHTGHENNTIREAAIQLVCQLYSRPELSKLI
EEYAVLYLGFLRLHIPPEIVFGQDRGRPQVESQWTESTTRACLGLYLALLSEHQDLIHEL
ARVYTSMSADVKRIVLRLVEGPVRSLGMGSPQLLALVENCPKGAETLVTRIIHILTEKSA
PSVELVSRVRELYQTRVSDVRFLIPVLNGLTKKEVIAALPKLIKLNPIVVKEVFNRLLGT
HNNESGVPHTSPITPAELLIALHNIDPSKAELKTIIKATSLCFAEKQIYTQETVAVVMQH
LMEMTPLPTLLMRTVIQSLALYPRLSGFVMNILQRLILKQVWKQPKVWEGFVKCCERTQP
QSFAVILQLPPTQLAEALKMASNLRTPLLAHVEAFAENQKAHIPQSIMDVIQGKSPCDMH
DEFDIAPPGDYPIEQKPDTIETDVSEPAPPGLD
NT seq 3342 nt   +upstreamnt  +downstreamnt
atggatcctcgaatacatagaagatcagaaccagaaaaaggaccaggcgatttgatagtt
gaatggttaaatgaagcttctttaaatccaggagaagatataaaagttacaaatttatgt
aaagttcaagaaatcttaattaataaggaaccacaattacttccattatatttggatgaa
gcattacagttttctttagatagatatgcagaagttagaaaaacaattacaggttttata
gaagaagccggagtaaaacaacctgaagtaattccacgtgttgttcaaatacttttaaga
ttagtttctgatgaatcatcagctgttgctaaaagagctcttagagctagtggtagaata
ttaagagctgctttaaaatggatatctagtgctactacagttacagcagaaatggaagta
gcatggaatcaacttagtgctcttaaaattcaaataataaatatgattgatagtgataat
gatggtatcagaacacaagctgtgaaatttcttgaaggtgttgttttaatacaaacatat
cctgatccagatattcctaaaaaagctgatgatttttctttagaagatattccattaaca
ttaaaaatagcacgtagacgaaaattagaagaagaagctaatgatgtaatggatttatta
ataaaatttcatggatctccacatgttagtagtgttaatttgatgacatgcatgggatct
ttagcattaattgctaaaacaagacctcaatttatgccaggtgtaatacaagcattacag
agattacaacatgatttaccacctacattgtccgattctcaagtaactagtgtacaaaag
caattaaaattaactctattaggattaatgaaacatccagctagcatagaatttgtatct
ataatagctaaacaattaacacaattaggagcaaaagaacaagaaattctaaaagcttat
ccgaaaccagaagatattcggcgtatgaagaaacgtcaacaagtaaaagaagcagctgca
tcttctgcagcaaaacgtgtgaaaattgaaacttctttagtatcagatgaatcggaaatt
gtacccagtttaattcctacttcaaaattatcagaattaattgaactttcagaaagtttt
attgctgaaagattaagcgtagaaattgctacagatttagtaatggatagtatggcatgg
gttccagacacaatgacagctatttttcaaagagaatatcaacctacttcaacgaccgat
ataaatattcagcggcagacaattgctaaattattagcgacgcaaataaagcaagctaaa
acgaagaaaaaaaaggatgctaaagatgaagatgctgtgatggaagatttagtaaaaaat
ccaactattagcgtagcagaagctaaacgagaacgaaaacgtgaaaaagatagagaaaaa
gagaaagaagcaagggcatctctagaagcgcatgaaaaatcattggcgaaaacaagaact
cgtttaaaagccttaaaattgtctgaagttacaaaaccattgtcaaaagaagtaaaagaa
aaaatgttattgatggctgtgaatcgaattttactttctgagaaaacagctgtatttggt
ggtgtggcagccataagatcaaaaattttaactactctagctgcaacatttaatccatac
attaaagaggcagtattacattatattactgatgatatgagaaatcgtttagatttagca
ttaggttggttatatgaagaatatgcattgcttcaaggttttcaaagacgaactacatta
tgtacaaaacctcaagaagctccacatcaggcttataactttttattatgtactttagta
tctgcaatagatttagttcaaggcaaagatcgtgatacattattatataggctatacttg
gaagcacctttaattaccgaagatgctgttgaagctttaaaaatggtatcttctgatgaa
acaagaggattggtaccattgcaattattaaaagagatggttattcgtagaccaacaaaa
caattagtttttctaaatgtattattatgtcatactggtcacgaaaataatacgataaga
gaagctgctatacaattagtttgtcaactgtatagtcgtcctgaattaagtaaactcata
gaagagtacgcggttctttatttaggtttcttacggcttcatatacctcctgaaattgtt
tttggacaagatagaggtaggccacaagtagaatctcaatggactgaatcaactacaaga
gcttgtcttggattatatcttgctctgttgagtgaacatcaagacttaattcatgaattg
gcaagagtttatacatcaatgagtgcagatgtcaaacgtattgttcttcgattagtagaa
ggacctgtaagatctttaggaatgggtagtccacaattgttggcattagttgaaaattgt
cctaaaggcgctgaaacactagttacaagaattattcatattcttacagaaaaatctgca
ccaagcgtggaattagtatcaagggtacgagaactctatcaaactagagtttcagacgtt
cgattcttaataccagtcttaaatggtttaacaaaaaaagaagtaatagccgctcttcca
aaactcataaagttaaatcctattgttgttaaagaagtattcaatagattgttaggcact
cacaataatgaaagtggtgtacctcatacatctcctattacacctgctgaattattaata
gcattgcataatatagatccaagtaaagcagaattaaaaacaattataaaagctacgtct
ttatgttttgcggaaaaacaaatatatacgcaagaaactgtagctgttgtaatgcaacat
cttatggagatgacaccgcttccaacattactcatgcgtacagtgatacaaagtttagca
ttatatcctagattaagtggatttgttatgaatatacttcagcggttaattctcaagcaa
gtttggaaacagccaaaagtttgggaaggtttcgtaaaatgttgtgaacgcacgcagcca
caaagttttgcagttattttacagcttcctccaacacaattagccgaagcgttaaaaatg
gcaagcaatttacgaacacctttactagcacatgtcgaagcctttgctgaaaatcagaaa
gcgcacattccgcaatcaataatggatgttattcagggtaaatcaccttgtgacatgcat
gatgaatttgatattgcaccacccggtgattatccgattgaacaaaaaccagatacaata
gaaactgatgtttcagaaccagctcctcctggtttagattag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (36)   
   KEGG ORTHOLOGY (1)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   BEEBASE (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (54)   

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