KEGG   Astyanax mexicanus (Mexican tetra): 103022855
Entry
103022855         CDS       T05042                                 
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1 isoform X1
  KO
K04954  hyperpolarization activated cyclic nucleotide-gated potassium channel 1
Organism
amex  Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:amex00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:amex04040]
    103022855
Ion channels [BR:amex04040]
 Voltage-gated cation channels
  Cyclic nucleotide-gated channel (HCN)
   103022855
SSDB
Motif
Pfam: Ion_trans Ion_trans_N cNMP_binding Ion_trans_2 LPD1
Other DBs
NCBI-GeneID: 103022855
NCBI-ProteinID: XP_022532269
Position
14:34090090..34283001
AA seq 944 aa
MEEGMMKSNSFSSNREEKAEADGRNSVFQRQDSALLKKNSTGGGGGGGGGGGGGSSGSNA
ANAAASAGKEHANSVAVKTDREETMLGLEDADPAGRSHGFMQRQIGAMLQPGVNKFSLRM
FGSQKAVEKEQERVQTAGYWIIHPYSDFRFYWDLIMLIMMMGNLIIIPVGITFFSEQTTT
TWLVFNVASDTIFLVDLVMNFRTGIVNEESSEIILDPKVIKMNYLKSWFVVDFLSSIPVD
YIFLIVEKGFDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLAS
AVVRIFNLIGMMLLLCHWDGCLQFLVPLLQDFPPDCWVSLNGMVNDSWGKQYSYALFKAM
SHMLCIGYGARAPVSMSDLWITMLSMIVGATCYAMFVGHATALIQSLDSSRRQYQEKYKQ
VEQYMSFHKLPADMRQKIHDYYEHRYQGKIFDEDNILNELNDPLKEEIVNFNCRKLVATM
PLFANADPNFVTGMLSKLKFEVFQPNDYIIREGTVGKKMYFIQHGVASVITKHNKEMKLT
DGSYFGEICLLTKGRRTASVRADTYCRLFSLSVDHFNEVLEEYPMMRRAFETVAIDRLDR
IGKKNSLLLQKFQKDLNAGVFNTQENELLKQIIRQDREMVMMVERKQSVTGANSTPMSGN
SIINSPAQPPFINFANSQFQQAAPMTYSTAASITPAARIAQGVLFSASGISPGNLGTSSP
NPQTPLQQPSGIKSPCSFTAAVCSPPVQTPLSSRTFQYGSPTASQLSLVQPTIPQQSLAA
QQQQQQQQQQLPSSQQPQPQQASPQRSEIHKSTQALQSGSLSRDIRHLSASQPSLPHETS
LAVRPHPSSGESLAAIQPPAATAQVQAQIQAQVPVVQAVPQSGIRTTVPQRVALFRQMSS
GSLPPVRAAPSSLQHRDSTASRRESAVLSSTETDQDKMRFASNL
NT seq 2835 nt   +upstreamnt  +downstreamnt
atggaggagggcatgatgaagtccaactcgttctccagcaacagggaggagaaggcggag
gcggacggccggaacagcgtgtttcagcggcaggactcggcgctgctgaagaagaacagc
accggaggaggaggcggtggaggaggcggaggaggcggtggcagcagtggcagtaacgcc
gccaacgccgccgcctccgccggcaaggagcacgccaactccgtggcggtgaagacggac
cgcgaggagaccatgctggggctggaggacgccgaccccgcgggccggtcgcacggcttc
atgcagcggcagatcggggccatgctgcagcccggagtcaacaagttctccctgcgcatg
ttcggcagccagaaggcggtggagaaggagcaggagcgcgtgcagaccgcgggctactgg
atcatccacccctacagcgacttcaggttctactgggacttgataatgctcatcatgatg
atggggaatctaatcatcattcctgttggaataaccttcttttctgagcaaaccaccacc
acctggctggtgtttaacgtggcctcggacaccatcttcctggtggacctggtcatgaac
tttcgcacgggcattgtgaacgaggagagctccgagatcatcctggaccctaaggtcatt
aagatgaactacctgaagagctggtttgtggtggatttcctctcctccatccccgtggat
tatatctttctgattgtcgagaaaggctttgactcggaggtgtacaaaacggcccgagcg
ctgcgaatcgtccgcttcaccaaaatcctcagcctgctccgcctgctgcggctgtcccgc
ctcatcagatacatccaccagtgggaggagattttccacatgacctatgacctggcgagt
gcagtggtacgaatctttaatctgattggtatgatgctgctgctgtgtcactgggacggc
tgcctgcagttcctggtgcctctgctccaggatttccctccggattgctgggtgtcgtta
aacggtatggttaacgactcctggggaaagcagtactcgtacgccctctttaaagccatg
agtcacatgctgtgtatcggttatggagctcgagcgcccgtcagcatgtccgatctgtgg
atcaccatgctcagcatgatcgtgggggccacctgctacgccatgttcgtgggccacgcc
accgccctcatccagtccctggactcctcgcgacgccagtatcaagagaagtataaacaa
gtggagcagtacatgtccttccacaagctcccagccgacatgcggcagaagatccacgac
tattacgagcatcgctaccagggcaagatcttcgatgaggataacatcctgaacgagctc
aacgaccctttaaaagaggagatcgttaacttcaactgccgtaagctggtggccaccatg
cctctgttcgccaacgccgaccccaactttgtgacgggaatgctgagcaagctcaagttc
gaggtgttccagcccaacgattacatcatccgcgagggaactgtgggtaaaaagatgtac
ttcatccagcacggcgtcgccagcgtcatcaccaagcacaacaaggagatgaagctcaca
gacggctcctatttcggagaaatctgtctactaacgaaaggccggcgcacggccagcgtc
cgcgccgacacgtactgccgcctcttctccctgtctgtcgaccacttcaacgaggtcctg
gaggaataccccatgatgcggcgcgcgttcgagacggtggctattgaccgcctggaccgc
atcgggaagaagaactcgcttctactgcagaagttccagaaggatctgaacgctggcgtg
ttcaacacgcaggagaacgagctgctgaagcagatcatccggcaggaccgggagatggtt
atgatggtcgaaaggaagcagtcggtaacgggggccaactcgacaccgatgtctggaaac
tccatcattaactctcctgctcagccgccgttcattaacttcgccaacagccagttccag
caagccgcccccatgacctacagcaccgccgcgtccatcaccccggccgcccgcatagct
cagggcgtcctgttctccgcatccggcatttcacctggaaacctgggtacctcctccccg
aacccgcagaccccactgcagcagccgagcggcatcaagtcgccctgttccttcacggcg
gccgtttgcagccctccggtccagacgcctttatccagccgaacgttccagtacggctcg
cccaccgcctcccagctttccctggtacagccgaccattcctcagcagtccttagcagca
cagcagcagcagcagcaacaacaacagcagctgccatcttcccaacagcctcagcctcaa
caggcttctccccaaagaagcgaaatccacaaaagcacgcaggcgctccagtccggaagc
cttagccgagacattcgccacctctcagcctcccagccctctttaccccacgaaacctcg
ctagccgtccggccgcacccatcctccggcgaatctctggccgccatccagccccctgca
gccacagcccaggtccaggcccaaatccaggcccaagttccggtggtccaggccgtccct
caaagcggcatccgcaccactgtccctcagagggtggcgctcttccgccagatgtcgtcg
ggatctttaccgccggtgcgcgccgcgccctctagcctccagcacagggattccacggcg
tccagacgagaatcggcggtcttgagcagtacagagaccgatcaagacaagatgcgattc
gcatcgaatttatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (25)   

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