KEGG   Astyanax mexicanus (Mexican tetra): 103023037
Entry
103023037         CDS       T05042                                 
Symbol
usp34
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 34
  KO
K11853  ubiquitin carboxyl-terminal hydrolase 34 [EC:3.4.19.12]
Organism
amex  Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:amex00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:amex01002]
    103023037 (usp34)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:amex04121]
    103023037 (usp34)
Enzymes [BR:amex01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     103023037 (usp34)
Peptidases and inhibitors [BR:amex01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   103023037 (usp34)
Ubiquitin system [BR:amex04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    103023037 (usp34)
SSDB
Motif
Pfam: UCH UCH_1 DUF3517 zf-ribbon_3 CDC27
Other DBs
NCBI-GeneID: 103023037
NCBI-ProteinID: XP_022530260
Position
12:complement(4069617..4145997)
AA seq 3158 aa
MNDVEVPLHLLRYVCLFCGKHGLSLMKDCFETGTPETLPFPIAHAFITIVSNIRIWLHIP
AVMQHIIPFRTHVIRYLCKLSDQELRQSAARNMADLMWSTVKEPLDSALCFDKESLDLAF
KYFMSPTLTMRLAGLSQITNQLHTFNDVCNNESLVSDTETSIAKELADWLINNNVVEHIF
GPNLHIEIIKQCQVILNFLAAEGRLSTQHVDCIWAAAQLKHCSRYIHDLFPSLIKNLDPV
PLRHVLNLVSGLHPSAHTEQTLYLASMLIKALWNNALAAKAQLSKQSSFASLLNTNLPMG
NKKGSPAASPESSDNSDTHHSGGSDMEMDEPIMSSGKRGQQRLSDTEESMQGSSDETANS
GEEGSSGPGSSSGRSEASSNEAESSRASQSAGSPGSELHSDDMADSEALKEEEEEDEDED
DEDEDEDEEEERITAASKSSPRKETRDSRDALSSELRKRKAGEPLGEVQGPPERPGMSGP
GVSGSIGAGPSSGPGPSLSKPKTIPFSPEVAAAMVTSSSSSLRILDACSSSSACLEGPSG
ERIDPSAIPPQAQEQQQQGIGPERGPEMGPSHGAAGSQEPPCLPRPSDFLSEAMGNELFN
CRRFINPQHHHHHHHHEGHMVEDMLSADDVSCSSSQVSAKSEKNMADFDGEESGCEEELV
QINSHAELSSHLQQHLPNLASIYHEHLVQGPTVHKHQYSGHAVTDINLDNVCKKGNTLLW
DLVQDEDAIHLSEGLINEAEKLLCSLVCWFTDRQIRMRFIEGCLENLAHHRSVVVSLRLL
PKLFGTFQQFGSSYDTHWITMWAEKELHMMKLFFEDLLHYIQEVREQRHKFALYSHSAEV
QVRLQFLTCVFSTLGSPDHFRLSLEQVDILWHCLVEDSECYDDALHWFLNQVRSKDQHAM
GMETYKHLFLEKMPQLKPETISMTGLNLFQHLCNLARLATSAYDSNSNCELCGMDQLWGI
ALRAQSADISRAAIQYINSYYINGKTGLEKEQEFISKCMESLMMASANLEKDPHSSLTII
ERGLLMLKTHLEAFRRRFAYHLRQWQIEGAGISSHLKALSDKQSLPLRIVCQPAGLPDKM
TIEMYPSDQVADLRAEVTHWYENLQKDQISQQAQLQEFNQSTRQQEFPGGLMGPVRMISS
GHELTTDYDXKTLHELGFKDMQMVFVSLGAPRRERKGEGVQLPASCLPPPQKEHIPMLLL
LQEPHLTTLFDLLEMLACFKAPGPDRPQHSTQNVRCEDLHLHAENLSRRVWELLMLLPTC
PNMLQAFQNISDETGSDGLCWKDLLRIKSPHKLLYALEIIEALGKPNRRIHRESTGSYSD
LYPDSDDSSEDQIENSKNTWSCKFVASGGLQLLLEIFNSAILEPKEHESWTVWLLDCLAC
LLKLICQFAVDPADLDLAYHDVFAWSGLTDTQRKRAWPGKSRKGAGEHGKGLHIPRLTEV
FLSLVQGTNLIQRLINVAYTYDNLAHRVLKAQSDHRSRHEVTHYSMWLLVSWAHCCSMVK
SSLADSDHLHDWLKKLTLLIPETAVRHEACNGLYKLSLSGLEGGESINRSFLLLAASTLL
KFLPDAQALKPLRVEDYEEEAVLRSGCKEYFWLLCKLIDNIHVKDASQTTLLDLDALARH
LADCIRSREILDQQDGAVEDDGLTGLLRLATSVLKHKPPFKFCREGQEFLRDIHDVLFLL
PSLKDRQQPKCKSHAARAAAYDLLVEMVKGSVENYRLLHNWVMAQHMQASHAPYKWDYWP
HDDVRAECRFVGLTNLGATCYLASTIQQLYMIPEARQAVFTAKYLEEIKHKTTLLELQKM
FTYLMESERKAYNPRPFCKTYTMDKQPLNTGEQKDMTEFFTDLITKIEEMSPDLKNTVKT
LFGGVITNNVVSLDCDHVSQTAEEFYTVRCQVADMKNIYESLDEVTIKDTLEGDNMYTCS
QCGKKVRAEKRACFKKLPRILSFNTMRYTFNMVTMMKEKVNTHFSFPLRLDMTPYTEDFL
MAKGDRKEGFLDSGEGKAPESYEYDLIGVTVHTGTADGGHYYSFIRDIVNPHAYRNNKWY
LFNDAEVKPFDSAQLASECFGGEMTTKTYDSVTDKFMDFSFEKTHSAYMLFYKRVEPEEE
NGKDFSSDVSPDLLEWIWHDNMQFLQDKNIFEHTYFGFMWQLCSSIPSTLPDPKAISLMT
AKLSTSFVLETFIHSKEKPTMLQWIELLTKQFNNSQAACEWFLDRMADDNWWPMQILIKC
PNQIVRQMFQRLCIHVIQRLRPVHAHLYLQPGMEDGSDDMDAPVEDIGSRSCVTRFVKTL
LSIMEHGVKPHSKHLTEYFAFLYEFAKMGEEESQFLLSLQAISIMVHFYMGTKGPENTQV
EVLSEEEGEEEDEEEDILSLAEEKYRPAALEKMIALIALLVEQSRSERHLTLSQSDMAAL
TGGKGFPFLFQHIRDGINIRQTCNLIFSLCRYNNRLAEHIVSMLFTSIAKLTPEAANPFF
KLLTMLMEFAAGPPGMPSFASYILQRIWEVIEYNPSQCLDWLAVQTPRNKLAHSWVLQNM
ENWVERFLLAHNYPRVRTSAAYLLVSLIPSNSFRQMFRSTRSLHIPTRDLPLSPDTTVVL
HQVYNLLLGLLGRAKLYVDVAVHGTTKLVQYFSFMTYCLISKTEKLMFSGYFMDLWNLFQ
PKLSEPAIATNHNKQALLSFWYNVCVDCSENVRLIVQNPVVTKNIAFNYILADHDDQEVV
LFNRGMLPAYYGILRMCCEQSAAFTRQLASHQNIQWAFKNLTPHASQYPGAVEELFNLMQ
LFVAQRPDMREEELEDIKQFKKTTISCYLRCLDGRSCWTTLISAFRVLLENDEDRLLVVF
NRGLILMTESFNTLHMMYHEATACHVTGDLVELLSIFLSVLKATRPYLQRKDVKQALIQW
QERIDFAHKLLTLLNSYSPPELRNACLDVLKELVLLSPHDFLHTLVPFLQHNHCTYHHSN
IPMSFGPYLPCRENIKLMGGKNNIRPPRPELNMCLLPSMVETSKGKDEVYDRMLMDYFLS
YHQFIHLLCRVAINCEKFTETLVKLSVLMAYEGLPLHLALFPKLWTELSQSQSSLAKTCV
KLLCEDPAFGEYIKCILMDERTFLNNNVAYSFLTCFLHKVQPQVLSGPSCANLISVLVTN
LLNEYHSLQPEPANQSAEISKTSSLLNAVSTHTLSIIK
NT seq 9477 nt   +upstreamnt  +downstreamnt
atgaatgacgtggaggttcctctgcacctgctgcggtacgtgtgtctgttctgtgggaaa
cacggtctgtctctgatgaaggattgctttgagacgggaacgcctgaaaccctgcccttc
cccatcgcacacgccttcatcaccatcgtatctaacataagaatatggttgcacattccg
gctgtgatgcagcacatcatcccgttccgcactcacgtcatcaggtatctgtgtaagctg
tctgatcaggagctgcgtcagagtgcagctcggaacatggctgatctgatgtggagcaca
gtgaaggagccgctggacagcgcactgtgcttcgataaggagagcctggacctcgccttc
aagtacttcatgtcccccacgctcaccatgagactggctggactcagtcagatcacgaat
caactacacacctttaacgatgtctgcaataacgagtctctggtgtccgatacagagacg
tcaatagcgaaggaacttgctgattggctcatcaacaacaacgttgtggagcacattttt
ggaccaaatttgcacattgagatcattaagcagtgccaagtgatcctgaacttcctggct
gcagaaggacgactgagcacacagcatgtagactgtatatgggcagctgctcagctgaag
cactgtagtcggtacatccacgacctgttcccttccctaattaagaacctggatccagtg
cctctcagacacgtccttaacctggtgtctggactacaccccagtgctcacactgaacag
actctgtatctggcgtccatgttgataaaggcgttgtggaataacgctctggctgccaaa
gctcagctctccaaacagagctccttcgcttctctgctcaacaccaacctgcccatgggc
aacaagaaaggttccccggcggcgagtccggagagcagtgataacagcgacacgcatcac
agcggagggagtgacatggaaatggatgagccaatcatgagcagcggaaaacgaggccag
cagaggctctctgacaccgaggagtcgatgcagggcagctcggacgagacggcgaacagc
ggggaggagggcagcagcgggccgggcagcagcagcgggcgcagcgaggcctccagcaac
gaggccgagtccagccgggccagccagtcggccggcagccccggcagcgagctccactcg
gacgacatggccgacagcgaagccttaaaggaggaggaggaggaagacgaggacgaagac
gacgaggatgaagacgaggacgaggaggaggagcggatcactgcagcgtcgaaaagcagc
ccgcgcaaagagaccagggactccagagacgctttatcctcagaactccgcaagcggaaa
gccggagagcctctgggagaagtccagggtcctccggaacgacccggaatgtctggaccg
ggcgtatccggttctatcggtgctggaccgagttctggacccggtcccagtctgtccaaa
cccaaaaccatacccttttcccctgaagtggccgccgccatggtaacctcatcttcatcc
tctctgaggattctggacgcttgctcttcttcctctgcgtgtttagaaggaccttcagga
gaacggatagacccctctgccatcccccctcaagcccaggagcagcagcagcaagggatc
ggacctgagaggggtccagagatgggcccctcacacggggcagcgggttcccaggagcct
ccctgcctgcccaggccatccgacttcctgtctgaagccatgggcaacgagctgttcaac
tgcagacgcttcatcaacccccagcaccatcaccaccatcaccaccatgaaggtcacatg
gtggaggacatgctgagtgcggatgacgtgagctgcagcagttctcaggtcagcgctaag
tctgagaagaacatggcggattttgatggggaggagtcgggctgtgaggaggagttagtc
cagattaactcccacgctgagctcagctcccacctgcagcagcacctgcccaacctcgcc
tccatctaccacgaacacctggttcaaggtcctacagttcataaacaccagtactcgggc
cacgcggtgacggacattaacctggacaacgtgtgtaagaaaggaaacacactcctgtgg
gacctggtgcaggacgaggatgcgatccacctgtcagagggtttgataaacgaggcggag
aagctgctgtgttcgctggtgtgctggttcactgaccggcagatccgcatgcgcttcatt
gagggctgcctggaaaacctggcacatcacaggtcggtggtggtgtctctgcgtttgctg
ccgaagctcttcggaaccttccagcagttcggctccagttacgacacacactggatcacc
atgtgggctgaaaaagagctgcacatgatgaagcttttctttgaggatcttctgcactat
attcaggaagtgagggagcagaggcacaagttcgctctgtacagtcacagtgcggaggtt
caggtgcgactgcagttcctcacctgtgtgttctccacgctgggctcaccagatcacttc
aggctgagtctggagcaggtggatatcctgtggcactgtctggtggaggattcggagtgt
tatgacgacgctctgcactggtttctgaatcaggtgcgcagtaaagatcagcacgccatg
ggcatggagacctacaaacacctcttcctcgagaagatgccgcagttgaagcctgagacc
attagcatgacagggttaaatctctttcagcatctctgtaatctggccagactggccacc
agcgcctacgacagcaactccaactgtgagttgtgtggtatggatcagttgtggggaatt
gctctcagagctcagtctgcagacatcagccgagccgccattcagtacatcaactcctac
tatattaacggtaagacgggtctggagaaggagcaggagtttatcagtaagtgtatggag
agtttaatgatggcctcggctaacctggagaaagaccctcactccagcctcaccatcatc
gagagggggctgctgatgctcaaaacacacctggaggccttcagacgcaggtttgcgtat
cacctgcgtcagtggcagattgagggggctggaatcagcagccatctcaaagccctcagt
gataaacagtccctgcctctgcgcattgtgtgccagccagccggcctgcctgacaagatg
acgatagagatgtaccccagtgatcaggtggctgatctgagggctgaagtcactcactgg
tatgagaacctgcagaaagatcagatcagtcagcaggcccagctgcaggagttcaaccag
agcacccgccagcaggagttcccaggtggtctgatgggtccggtgcggatgatctcttca
ggtcatgaactgaccacagactacgatngaaagactctgcatgagctcggctttaaggac
atgcagatggtgtttgtgtctctgggagctcctcggagagagaggaagggggagggggtg
cagcttcctgcgtcgtgtctccctcctcctcagaaggagcacatccccatgctgctgctc
ctgcaggagcctcacctcaccacactcttcgacctgctggagatgctcgcctgcttcaaa
gcccccggcccggaccgcccacagcacagcacacagaacgtgcgctgtgaggacctgcac
ctgcacgcggagaacctgtctcgccgtgtttgggagctgctcatgctcctgcccacctgt
cccaacatgctgcaggccttccagaacatctccgacgagacgggttctgatgggctttgc
tggaaggatctgttgaggataaagtctcctcataagctgctgtacgctctggagatcatc
gaagctctcggaaaacccaaccgccgaatccacagagagtccacggggagttacagtgat
ctgtatccggactctgatgactccagtgaggatcagattgagaacagcaagaacacatgg
agctgcaagtttgtggcgtctggtggtcttcagctgctgctggaaatctttaattcggct
attctggaacccaaagagcacgagtcctggactgtgtggttgttggactgtctggcgtgt
ctgctgaagctgatttgtcagttcgcggtggatccggcggatctggatctggcctatcac
gacgtgttcgcctggtccggcctgacggacactcagcggaagagggcgtggcctgggaag
tcccgcaaaggagcaggagagcacgggaaggggcttcacatcccacgactcaccgaggtg
tttctcagtctcgtccagggcaccaacctcatccagaggctcatcaatgtggcctacacc
tatgataacctggcacacagggtgttgaaagcacagtctgatcaccgctctcgccatgaa
gtgactcactactccatgtggctgttggtgagctgggctcattgctgctccatggtgaag
tccagcctggctgatagtgatcatcttcacgactggctgaaaaagctcacgctgctcata
ccggagacggcggtgcgtcatgaggcgtgtaacgggctgtataagctctctctgtctggg
ctggagggaggagagtccattaacagatcatttctgctgctggcggcttcaacactgctc
aaattcctacccgacgcacaggctctcaaaccgctcagagtggaggattatgaggaggag
gcagtattgcgctcgggctgtaaggagtatttctggctgttgtgtaaactcatcgataac
atccacgttaaagacgccagtcagaccacactgctggacctggacgccctggcccgacac
ctcgcagactgcatacgcagtcgtgaaatcctggatcagcaggacggagctgtggaagac
gacggtctgacgggtctcctgcgtttggccaccagcgttctgaagcacaagcctcccttc
aagttctgtcgagaaggtcaggagttcctgagggacatccacgacgtgctgttcctgctg
cccagcctgaaagaccggcagcagcccaagtgtaagagccacgcggcgcgggcggcggcg
tacgacctgctggtggagatggtgaagggctcggtggagaactacagactgttacacaac
tgggttatggcccagcacatgcaggcgtctcacgctccgtataagtgggactactggcca
cacgatgacgtcagagcagagtgccgcttcgtgggtttgaccaatctgggggcgacctgt
tacctggcttcaaccatacagcagctttatatgattccagaggccagacaggctgtgttt
actgcaaagtatttggaggagatcaagcataagaccacactgctggagctgcagaagatg
ttcacctatcttatggagagtgagaggaaggcctacaaccctcgtccgttctgtaagacc
tacaccatggacaagcagcctctcaacaccggagagcagaaggacatgaccgagttcttc
accgacctcatcaccaaaatagaggagatgtctccagacctgaaaaacactgtgaagacg
ctgttcggaggagtcatcaccaacaacgtggtgtcactggactgtgatcatgtgagtcag
acggcggaggagttctacactgtgaggtgtcaggtggcggacatgaagaacatctacgag
tctctggatgaagtgactattaaagacactctggagggagacaacatgtacacctgctct
cagtgtgggaagaaagtgcgagcagagaaacgagcgtgctttaagaagcttccgcggatc
ctgagcttcaacaccatgcgctacaccttcaacatggtgacgatgatgaaggagaaagtc
aacacgcacttctccttccctctgcgcctggatatgaccccctacaccgaggacttcctc
atggccaagggagacaggaaggagggttttctggacagtggagaggggaaagctccggag
agttatgagtacgatctgattggtgtaacggtgcacacgggcacggcggacggcggccat
tactacagcttcatcagagacatcgtcaacccccacgcgtaccgcaacaacaagtggtat
ctgtttaacgacgcggaggtgaagccgtttgattcagctcagctggcgtctgagtgtttt
ggaggagaaatgacgacgaagacctatgactcggtcacggacaagttcatggacttctcc
tttgaaaagacccacagtgcctacatgttgttctataagagggtggagccggaggaggag
aatgggaaggattttagttctgatgtttctcctgatctgctggagtggatctggcatgat
aacatgcagtttctccaggataagaacatttttgagcacacgtacttcggttttatgtgg
cagctgtgcagcagcatccccagcactttacccgaccccaaagccatctcactcatgact
gccaagcttagcacatcattcgtcctggagaccttcattcactccaaagaaaagcctacg
atgctccagtggattgaacttctcaccaagcagtttaacaacagccaagcagcgtgtgag
tggtttctagatcggatggctgatgataactggtggccgatgcagattttaataaagtgt
ccgaaccagatcgtccgacagatgttccagaggttgtgtatccatgtgattcagaggctg
aggccggttcacgctcacctgtacctgcagccgggaatggaggatggctctgatgatatg
gacgctccggtggaggatatcggcagccgctcctgtgtgacgcgcttcgttaaaacgctg
ctgtccatcatggagcacggcgtgaagccgcacagcaaacacctgaccgagtacttcgcc
ttcctctacgagttcgccaagatgggcgaggaggagagtcagtttctgctgtcactgcag
gccatctccatcatggtccatttctacatgggcaccaagggtccagagaatactcaggtg
gaggttctgtcggaggaggagggagaggaggaggatgaagaggaggatattctgtctctg
gcggaggagaagtaccggccggcggctctggagaagatgatcgccctcatcgccctgctg
gtggaacagagtcgctctgaaaggcatctgactctctctcagagtgacatggccgctctg
accggtgggaaaggattccccttcctgtttcagcacatcagagatgggatcaatatcaga
cagacctgcaacctcatcttcagcctctgcagatacaacaacagactggctgagcatatc
gtctccatgctcttcacatctatagccaagctcacacccgaggcggcgaatccgttcttt
aagctgttgaccatgctgatggagttcgctgcaggtcctcctggaatgccctcgttcgcc
tcttacatacttcagagaatctgggaggtgatagagtataacccgtctcagtgtttggat
tggttggctgttcagactccccgtaataaactggctcacagctgggttctgcagaacatg
gagaactgggtggagcgattcctactggcacacaattacccccgcgtacgcacctcggcg
gcgtacctcctggtctccctgattcccagtaactcgtttcggcagatgtttcgctccact
cgttctctgcacatccccacgcgggacctccccctcagtcctgacaccaccgtcgtcctg
caccaggtttataacctgctgctgggtctgctgggccgggctaagctctacgtggacgtt
gcggttcacggcaccaccaaactggtgcagtacttcagcttcatgacctactgtctgatc
tccaagactgagaagctgatgttctccggatacttcatggacctgtggaacctctttcag
cccaaactctccgagccggcgatcgccaccaatcacaacaagcaggccctgctgtccttc
tggtataacgtgtgcgtggactgcagcgagaacgtgcgcctgatcgtacagaatccagtg
gtgaccaaaaacattgccttcaactacatcctggctgaccacgacgaccaggaggtggtg
ctgtttaaccgcgggatgctgccggcctattacggcatcctgcgcatgtgctgcgagcag
tcggctgcgttcacccgccagctggcctcgcaccagaacatccagtgggcctttaaaaac
ctcacaccacacgccagccagtaccccggggcggtggaggagttatttaacctgatgcag
ctgttcgtggctcagaggccggatatgagggaggaggagctggaggatattaaacagttt
aaaaagactacaatcagctgctacctgcgctgcctggacggccggtcctgctggactact
cttatcagtgccttccgcgtgttactggagaacgatgaggacaggctgctggtggtcttt
aacagggggctgatcctgatgactgagtcctttaatactctacacatgatgtaccatgag
gccacagcgtgtcatgtgaccggtgacctggtggagctgctgtccattttcctctctgtc
ttaaaggcaactagaccttacctgcagcgcaaagatgtaaagcaggctctaatccagtgg
caggagaggatcgattttgcacataaactgctgacactcctcaattcctacagtcctcca
gagctacgcaacgcctgcttagatgtgttgaaggaactggtgctgctgagtccacacgac
ttcctgcacacactcgtgccgttcttgcagcacaaccactgcacatatcatcatagcaac
atccccatgtcgttcggtccatatcttccctgtagagagaacatcaagctgatgggagga
aagaacaatattcggccgccccgacctgaactcaacatgtgcctcctgccttccatggtg
gaaaccagcaagggtaaagatgaggtgtatgaccggatgctgatggactacttcctgtcc
tatcatcagttcatccacctgctgtgtagagtggccatcaactgtgagaagtttacagag
accctggtcaaactcagtgtgctgatggcgtatgaaggtctgccgctgcacctcgctctg
tttcctaagctgtggacggagctgagtcagtctcagtcgtctctggcaaagacgtgtgtg
aagctgctgtgtgaggatcctgcgtttggagagtatattaagtgcattctgatggacgag
agaacgttcctcaacaataacgtagcctattcattcctcacctgcttcttacataaggtg
cagccgcaggtgctgtcggggccgagctgtgcgaacctgatcagcgttctggtcactaac
ctgctgaacgagtaccactccctccagcctgaaccggccaatcagagcgcagagatcagc
aagaccagcagcttactcaacgcagtcagtacccacacattatcaataattaaataa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (69)   
   KEGG ORTHOLOGY (1)   
   RefGene (65)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (82)   

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