KEGG   Astyanax mexicanus (Mexican tetra): 103023604
Entry
103023604         CDS       T05042                                 
Symbol
vars
Name
(RefSeq) valine--tRNA ligase
  KO
K01873  valyl-tRNA synthetase [EC:6.1.1.9]
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:amex00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    103023604 (vars)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:amex01007]
    103023604 (vars)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:amex03016]
    103023604 (vars)
Enzymes [BR:amex01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.9  valine---tRNA ligase
     103023604 (vars)
Amino acid related enzymes [BR:amex01007]
 Aminoacyl-tRNA synthetase
  Class I (U)
   103023604 (vars)
Transfer RNA biogenesis [BR:amex03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    103023604 (vars)
 Prokaryotic type
    103023604 (vars)
SSDB
Motif
Pfam: tRNA-synt_1 Anticodon_1 tRNA-synt_1g GST_C tRNA-synt_1_2 GST_C_2 GST_C_3 TAP42 Jag_N tRNA-synt_1e
Other DBs
NCBI-GeneID: 103023604
NCBI-ProteinID: XP_022529771
Position
11:complement(11053008..11077374)
AA seq 1208 aa
MDSLYVSSHPDDFRSLQALIAAEFSPSRPQTLAEEPPARVARCRPALVLRDAEATALCGA
GAVSWYLASVGGRTGSDAQQQSEVWQWLSFAENELTPVACAVVFPLLGVMGVDKKLQQSS
RAELLRVLKVLDQILEPRTFLVGESLSLADVAVAMAALLPFKYALEPSDRKTLVNVSRWF
DTCVNQPQLLKVLGKITLCEKMVPVTPKSNSAVNTTTAAAAANGTAPCSTPVSGPPKTEA
QLKKEAKKREKMEKFQQKKEMEEKKKQMQSQTEKKAKPEKKELGVITYNIPTPAGEKKDV
LSPLPDSYSPQYVEAAWYPWWEKQGFFKPEYGRKSLSEPNPRGIFMMCIPPPNVTGSLHL
GHALTNAIQDCLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLMRERGMSRHDLGRENF
IQEVWKWKNEKGDRIYHQLKKLGSSLDWDRACFTMDPKLSYAVQEAFIRMHEEGVIYRSK
RLVNWSCTLNSAISDIEVDKKELIGRTLLPVPGYKEKVEFGVLVSFSYKIEGSDEEIVVA
TTRIETMLGDTAVAVHPEDSRYQHLKGKTVIHPFCDRKLPIVFDDFVDMNFGTGAVKITP
AHDHNDYEVGERHKLPFINILDENGFLINVPPPFLGMKRFDARKAVLQALKDRGQFKEVK
DNPMVVPVCSRSKDIVEPLLKPQWYVDCADMGKQAADAVRNGELKIIPDHHLKTWFNWMD
NIRDWCISRQLWWGHRIPAYFITVNDPSVKPGEDVDGHYWVSGRSEEEAREKAAKRFNVT
ADKISLRQDEDVLDTWFSSGIFPFSIFGWPNETEDLKVFYPGTLLETGHDILFFWVARMV
MMGLKLTGKLPFKEVYLHAVVRDAHGRKMSKSLGNVIDPLDVITGISLEGLHAQLKDSNL
DPVEIEKAKQGQKSDYPSGIPECGTDALRFALCAYTSQGRDINLDVNRILGYRHFCNKLW
NAVKFAMRTLGEGFVPWEKARLCGSESVSDRWILSRLCAAVTLCGNGFQAYDFPAITTAI
YNFWLYELCDVYLESVKPVFSSTDAESQKQAEVCRQTLYTCLEVGLRLLSPIMPFVSEEL
FQRLPRRQTQNSPASISVTPYPESSEFCWHSEEIDREMEFVMTVVRTIRSLRADYNLTKT
RADCYLQCIDSATVSLVEKYSLQIQTLSYSQAVHPVSGGDSAIPEGCAVAIASDKCSVHL
MLKHHDYN
NT seq 3627 nt   +upstreamnt  +downstreamnt
atggactccctgtacgtgtcctcccaccctgatgactttaggagtttgcaggcccttatt
gcagctgaattctccccatcccgcccgcagaccctcgcagaggagcccccagccagagta
gctcgatgtcgccctgccctggtgctgcgggacgccgaggcgacggcactgtgcggagcc
ggagcggtcagctggtacctggcatctgtgggcgggaggacgggcagcgatgcccagcag
cagagcgaggtgtggcagtggctgagctttgctgagaatgagctcacacctgtggcatgt
gccgtggtcttccctctgttgggggtgatgggagtcgacaaaaagttgcagcagagttct
cgggcggagctgttgcgtgttttgaaggttctggatcagattttagagccgcggaccttc
ctggttggagagagcttgtctctggctgatgtagctgttgcaatggctgcgctgctgcct
tttaaatatgcattggagccatcagacaggaagaccctggtgaacgtaagcaggtggttt
gatacgtgtgtcaatcagccgcagctcctgaaagtgctgggcaaaatcacactctgtgaa
aaaatggtgccggtgactcctaaatccaactctgctgtcaacaccaccactgctgctgct
gcagcaaacggcactgctccctgcagcacacctgtcagcgggccaccaaagacggaagcc
cagctgaagaaagaggccaaaaagcgagagaagatggagaagttccagcagaagaaagag
atggaggagaagaagaagcagatgcagtctcagactgagaaaaaggccaaaccggagaag
aaggaactgggagtgattacatataacattcctactccagctggcgagaaaaaagatgtg
ctaagccctcttcctgactcgtacagtccacagtatgtggaggcagcctggtacccctgg
tgggagaagcagggtttctttaagccagagtacggacggaagagcctcagtgaaccaaac
cctcgcggaatcttcatgatgtgtatccctcctcctaatgtgactgggtctcttcatttg
ggccacgccttaaccaatgccattcaggactgcctgaccagatggcacagaatgagagga
gaaacgactctctggaaccccggctgtgatcacgccggcatcgcgacccaggtggtggtg
gagaagaagctgatgagggagagagggatgagcagacacgacctcggacgagaaaacttc
atccaggaggtctggaagtggaagaacgaaaagggagatcggatctatcaccagctgaag
aagctgggctcttctctggactgggatagagcgtgtttcaccatggatccaaaactatca
tacgccgttcaggaggccttcattcgtatgcacgaggagggggtgatctacaggagcaaa
cgactggtcaactggtcctgcacactcaactccgccatctctgatatagaggtggacaag
aaagagctgatcggcagaactcttcttcctgtgccaggctataaggagaaggtggagttt
ggtgtgctggtgtctttctcctataaaatagaggggtcagatgaggagatcgttgttgca
accacgcgtatcgagaccatgctgggagatacagctgtggcagtgcaccctgaagactcc
agataccagcatttgaaagggaagacagtgattcacccgttctgtgaccgtaaactgccc
attgtgttcgatgactttgtggacatgaattttggaacaggtgctgtaaagatcacccca
gctcatgatcacaacgactacgaggtgggagagagacacaaactgcccttcatcaacatc
ctcgatgagaacggcttcctcatcaacgttcctcctccgttcctgggtatgaagaggttt
gatgcgaggaaagctgtgctgcaggccctgaaggacagaggccagtttaaagaggttaaa
gataaccccatggtggtgcctgtgtgcagccgttctaaggacatagtggagccgctgctg
aagccgcagtggtacgttgactgcgcagacatggggaagcaggctgcagatgcagtgaga
aatggggaactgaagatcattccggatcatcacctcaaaacctggttcaactggatggac
aacatcagggattggtgtatctctcgtcagctgtggtggggtcacagaatccctgcgtat
ttcattacagtcaatgacccatcagtgaaaccgggagaggatgtggatggtcattactgg
gtcagtgggcggtcagaagaagaagccagagagaaagcagccaagcgcttcaatgtcacc
gcagacaaaatctccctacgccaagatgaggacgtgttggatacctggttttcctctgga
atttttcccttttccatctttgggtggccaaacgaaactgaggacctgaaagtgttctac
ccaggcactctgctggagacgggtcatgatatcctgttcttctgggtggcgcggatggtc
atgatgggcctgaaactcacaggaaaactcccatttaaagaggtgtatctgcacgctgta
gtgcgggatgctcacggcaggaagatgagtaagtctctggggaacgtcatcgatcctctg
gacgtcatcacaggaatctcactggagggtctccacgcccagctgaaggacagtaatctg
gacccagtagagattgagaaagccaaacagggacagaaatctgactaccccagtggaatc
ccagagtgtggcaccgatgccctcaggtttgccctgtgtgcctacaccagccaaggaagg
gacattaacctggatgtgaacaggatcctgggctacagacatttctgcaataagctgtgg
aatgctgtgaagtttgccatgaggactctgggggagggatttgtgccctgggagaaagct
cggctgtgtggcagtgagagtgtatctgatcgctggattctctctcgactctgtgctgcc
gtcactctgtgtgggaacggattccaagcctacgatttcccagcgatcaccacggccatc
tacaacttctggctctatgagctgtgtgacgtctatctggagagtgtgaagcctgtgttc
agcagcacagacgctgagagtcagaagcaggcggaggtttgcaggcagactctctacacc
tgtctggaggtggggctccgcctcctctcccccatcatgcccttcgtttccgaggagctc
ttccagagattgccacgaagacagactcagaacagcccggccagcatctccgtcaccccc
tacccagagagctcagagttctgctggcacagcgaggagatcgaccgcgagatggagttc
gtgatgactgtggtcagaaccattcgatctctcagggccgactacaacctcacaaagact
cgcgctgactgttatctgcagtgtatagactctgctaccgtgtctctggtggagaaatac
agcctgcagatccaaactctctcctactctcaggccgtccaccctgtgagcgggggcgac
agtgctatcccagaaggctgtgcggtggccatcgcctctgacaagtgcagcgttcatctc
atgctgaagcatcatgattataattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (41)   
   KEGG ORTHOLOGY (1)   
   RefGene (37)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (67)   

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