KEGG   Astyanax mexicanus (Mexican tetra): 103024372
Entry
103024372         CDS       T05042                                 
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E-like isoform X1
  KO
K04852  voltage-dependent calcium channel R type alpha-1E
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex04010  MAPK signaling pathway
amex04020  Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:amex00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    103024372
   04020 Calcium signaling pathway
    103024372
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:amex04040]
    103024372
Ion channels [BR:amex04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   103024372
SSDB
Motif
Pfam: Ion_trans Ca_chan_IQ GPHH PKD_channel
Other DBs
NCBI-GeneID: 103024372
NCBI-ProteinID: XP_022533846
Ensembl: ENSAMXG00000008956
Position
16:complement(17090615..17204352)
AA seq 2196 aa
MAQPEGDAPREMGAEGDGAEATAGESKQAKAQRARTMALYNPIPARHNCLTVNRSLFIFA
ENNIIRKYARRIIEWPPFEYMILATIIANCIVLALEQHLPGEDKTPMSKRLEKTEPYFIG
IFCFEAGIKLVALGFVFHKGSYLRNGWNVMDFIVVLSGILATAGAHMNIPVDLRTLRAVR
VLRPLKLVSGIPSLQIVLKSIIKAMVPLLQIGLLLFFAILMFAIIGLEFYSGKLHHTCLP
TPNILENETVDSSEVEFACGVRRCPDKYDCNGTWIGPNDGITQFDNILFAVLTVFQCITM
EGWTAVLYNTNDALGPTWNWIYFIPLIIIGSFFVLNLVLGVLSGEFAKERERVENRRAFM
KLRRQQQVERELNGYRAWIDRAEEVMLAEENKNSGRSALDVLKRATSKKNARRRGEDKYS
EISTVGGSRPPPSIRSARRGPAAYLRRKERMLRFSIRRMVKTDSFYWIVLSLVGLNTICV
AIVHHNQPEWLTILQYYAEFVFLGLFLAEMFLKMYGLGFRLYFHSSFNCFDCGVIVGSIF
EVVWGFFRPGMSFGISVLRALRLLRIFKVTRYWTSLRNLVVSLMSSMKSIISLLFLLFLF
IVVFALLGMQLFGGRFIFKDYTPANFDTFPAAIMTVFQILTGEDWNDVMYNGIRSQGGVQ
YGMWSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKVQDEEEEEEFFNHRYKGREF
GLSEMRRRRRPYLYRKRAIHRGRPTPAEAEEETPGKGGACEEQPVNAFANRRERRNKMKM
SIWEQRANQLRKRRQMASREVLFGSPTEDPMDTPVSGHHQPHAITSMSPETSPAHLPESP
MSVVMPLPEPPMAIPIPLPEPPESEPLPLLSSVAEERTAPHRSNTERRHRVARKFRAAAA
AGVVQGGRHRRHRHRESRADSRATDSSQPGGSGEDQFTGDDAEGSQSRKSMNMDDSENNQ
QTELDEQHQRDGTCDVAVVLQPPGPAERESGLPCTCTGLGDEGELLSCPRHRADNTAELN
YLSGEAIDNENNASYLNQGEPLTETSIMREMSAQPLLELTPMTVSFKDVEVGHSAKNERQ
NDDDDDDDDDDDDEDEPTKTVPIVPPDSMFIFKSKNPIRRICHYVVTLRYFEMTILLVIV
ASSIALAAEDPVCTNSERNRVLRYFDYVFTGVFTFEMIIKMIDQGLILHDGSYFRDLWNI
LDFIVVVGALIAFALTNVMGNNKGRDIKTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVT
SLKNVFNILIVYKLFMFIFAVIAVQLFKGKFFYCTDGSMGTQRECQGYYIDYGRDRKEVK
KREWKRHEFHYDNVMWALLTLFTVSTGEGWPQVLQHSVDVTEEDHGPSRGNRMEMSIFYV
VYFVVFPFFFVNIFVALIIITFQEQGDKMMEECSLEKNERACIDFAISAKPFTRYMPQNR
QTLQYRLWHFVVSPSFEYTVLVMIALNTVVLMMKYHSAPAAYDTVLKHLNTAFTVLFSLE
CILKIMAFGFMNYFRDTWNIFDFITVLGSITEIIVDLQSVNTINMSFLKLFRAARLIKLL
RQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLNDESHINQHNNFK
TFFSALMLLFRSATGESWQEIMLSCLAGQECEPDPSIAPPFISPDHEGGCGTDFAYFYFV
SFIFFSSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRIWGEYDRAACGRIHYNAM
YEMLTHMSPPLGLGKKCPAKIAYKRLVLMNMPVDEDMSVHFTSTLMSLIRTALEIKIARG
GEDRVQLDTELQKEISVIWPHLSQKTLDLLVPINKDTDMTVGKIYASMMIMDYFKQSKAK
KLRQQAEEQSSSPALPLISHSAGSALTSGGFVALSPISPQELLMQPATDHQEDSEENQGS
VAEEQEMNGMWKEEQPPERFYRPRHKSYKAAVSHSEQAHLERGRSKEQRHLLSPKNSRFN
SNERSSKSCSRSPSEERRHGLPRQGNSSDSPVPSTSESSTPSGKRRLSQTPTRTHPHISY
SPLVCHTHPSSQADDEEEEEEQSGPPMLGCCSNALWDENAEEVKVRVEEEEEEEEEEGTH
SEQEEFLGSSARRYPSEPYLALQDEEHSPDSGPMETLTFEAAVATSLGRSNTITASVRTR
SRLGWQVPNGHFRKRLAQSVSVAGCEALSDTEDDKY
NT seq 6591 nt   +upstreamnt  +downstreamnt
atggcccagcctgaaggcgacgcgcctcgagagatgggcgcggagggcgacggcgccgag
gcgaccgccggggagtccaagcaagccaaagctcagcgcgctcggaccatggccctttac
aacccaatcccggccagacacaactgcctcaccgtcaacaggtcgctcttcattttcgcc
gagaacaacatcatcagaaagtacgcgagaaggatcatagagtggcctccgtttgaatac
atgatcctggccaccattatagccaactgcattgtgctcgccctggagcagcatcttcct
ggagaagacaagacgcccatgtccaaaagactggagaagacagagccctactttattgga
atcttctgttttgaagctggaatcaagctggtggctctcgggtttgtgttccataagggc
tcttacctgaggaacggctggaacgtcatggatttcatcgttgtgttgagtgggattctg
gccactgctggagctcacatgaacatcccggtggatctgaggacactgagagcagtgcga
gtcctgaggcccctgaaactggtgtcaggaatccccagtttgcagatcgttttgaagtcc
atcatcaaagcgatggtgccgctgctgcagatcggcctccttctcttcttcgccatcctg
atgttcgccatcatcggcctggagttctacagcgggaaactgcaccacacctgcctgcct
acacccaacatccttgaaaatgaaacagtggactcgtcagaggtggagtttgcctgcggg
gtgcggagatgtccggataagtacgactgcaacgggacgtggataggaccaaacgacggc
atcacacagttcgataacatcctcttcgcggtgctgacagtgttccagtgcatcaccatg
gagggctggactgcagtgctctacaatactaatgacgcactgggtcccacgtggaactgg
atatacttcattcccctcatcattatcggctccttctttgtgctaaacctggttctggga
gtcctctctggtgagtttgctaaagagagagagcgagtggagaaccggcgagccttcatg
aagctcaggcgacagcagcaggtggagagggaactcaatggataccgtgcttggatcgac
agagctgaggaggtgatgcttgcagaggagaataagaactctggacggtctgcactagac
gtgctgaagcgagccacgagcaagaaaaatgcaagacgtcgaggagaggataaatattct
gaaatctcgacagttggtggttcccgtcctccaccgagcatccgcagtgccagacggggt
cctgctgcctacctgcggcgcaaagaacgcatgttacgcttctccatccgccgcatggtg
aagacggacagcttctactggatagtgctcagcctggtgggcctcaacaccatctgcgtg
gccatcgtccaccacaaccagcccgaatggctgaccatccttcaatactatgcagagttt
gtgtttctgggactgtttctggctgagatgtttctgaagatgtacggactgggcttccgc
ctctacttccactcctccttcaactgcttcgactgtggggtgattgtcggcagtatattt
gaagtagtttggggattcttcaggcctggaatgtccttcggtatcagtgtccttagagct
ctacgtctgttacgaatctttaaggtaacaaggtattggacatctctgaggaacctggta
gtgtctctgatgagctccatgaagtccatcatcagcctcctcttcctgctcttcctcttc
attgttgtttttgccttgcttgggatgcagctctttggtggcaggttcatctttaaagat
tacactcctgctaactttgatacattcccagctgccatcatgaccgtctttcagattctg
acgggtgaagactggaatgacgtgatgtataatgggatccgctcacagggaggggtgcag
tacggcatgtggtcctccatttacttcattgtactaacgctgtttggaaactacacgctg
ctgaatgtcttcttggccatcgctgtggataatctggccaacgcacaggaactgactaag
gtacaggatgaggaggaggaagaggagttttttaaccatcgatacaagggccgggagttc
ggcctctcagagatgagaaggaggcgcaggccgtacttgtacaggaagagggccatccac
agggggcgcccgacacctgccgaggcagaggaggaaacacctggaaaaggaggagcctgt
gaggaacagccggtcaatgctttcgccaatcgtcgggagagacgcaacaagatgaaaatg
tctatatgggagcaacgggccaaccagctgcgcaagcggcgccagatggctagtcgcgag
gtcttgtttggcagccccactgaagaccctatggacaccccagtcagcggccaccatcag
ccgcatgcaataacctccatgtctcctgagaccagcccagcacacctgcctgaatcaccc
atgtcagtggtcatgcccttgccagaaccacccatggcaatccccatcccccttccagaa
ccaccagagtctgagccactgcccctcttgagttctgtggcggaggaaagaactgcacct
caccgcagcaacacagagagaagacacagagtggctcgtaagtttcgggcagctgcagct
gcaggggttgttcaaggaggaaggcacaggaggcacaggcacagagagtccagagctgac
tccagagccaccgacagctctcagccaggtggcagcggagaggaccagtttacaggtgat
gacgcagagggctcacagtccaggaaaagcatgaacatggatgacagtgagaacaaccag
cagacagagcttgatgagcaacatcaaagggacggtacctgtgatgtcgcggtggtcctg
cagcctcccggccccgcagagcgagagtctggcctgccctgcacctgcacgggactgggt
gacgagggagaactcctgtcctgcccgcggcaccgagcagacaatacagccgagctaaat
tacctctcaggggaagctattgacaacgagaacaatgccagctatttaaaccagggcgaa
ccgctgacagaaactagcattatgcgcgagatgtcggcacagcctctgttggagttgaca
ccaatgactgtgagtttcaaggacgtggaagtgggtcactcggccaagaatgaaagacaa
aatgacgatgatgatgatgatgacgatgatgatgatgatgaagatgagccaacaaaaact
gtcccaattgttccaccagacagcatgttcattttcaagagcaaaaacccgatcagaaga
atatgccactacgttgtgaccctgcggtatttcgagatgaccatccttctcgtgattgtg
gccagcagcatcgcactggctgctgaggaccctgtgtgcaccaactctgagcgcaacagg
gtactccgttactttgactatgtttttactggggtcttcacgtttgaaatgattataaag
atgatcgaccagggcttgattctgcacgatggctcgtacttccgggacttgtggaatatt
ctggatttcatagtggtggttggagctctcattgccttcgctctcacgaatgtaatggga
aacaacaaaggcagagacatcaaaaccatcaagtcgctgagagtgctgagagttctgcgg
cctctgaagaccatcaaacgtctccccaagctgaaggccgtgttcgactgtgtggtgacg
tcgctgaagaacgtcttcaacatcctcatcgtctacaagctcttcatgttcatctttgct
gtgatagccgtgcagctgtttaaagggaagttcttctactgtacagacgggtccatgggt
acacagagagaatgccaaggctactacatcgattacggacgggacaggaaggaggtgaag
aaacgggagtggaagaggcatgaattccactatgataacgttatgtgggcgctgctcact
ctcttcaccgtgtccaccggagagggctggccacaggtccttcagcactctgtggatgtg
actgaggaagaccatggccccagcagaggcaaccgcatggagatgtctatcttctacgtt
gtgtatttcgtagtcttccctttcttcttcgtgaacatcttcgttgctctcatcatcatc
accttccaggagcaaggagacaaaatgatggaggagtgcagcttggagaaaaatgagaga
gcctgcattgacttcgctatcagtgccaagccttttacccgctacatgccccagaacagg
cagaccctgcagtaccgactctggcactttgtggtgtcgccatcatttgagtacacagtt
ctggtgatgatcgcactcaacactgtggtcctcatgatgaagtaccactctgccccggct
gcctatgacactgtcctgaagcacctgaacacggccttcactgtgctgttctctctggag
tgcatcctgaagatcatggcctttggctttatgaactatttcagagacacgtggaacatc
ttcgacttcatcactgtgctgggcagcattactgagatcattgtagatttacagtctgtg
aataccattaatatgagtttcctgaagctgttcagagcagccaggctcattaaactcctg
aggcaaggctacacaatacgaatccttctctggaccttcgtacagtcttttaaggccctg
ccgtacgtgtgtctgctcatcgctatgctgttcttcatctacgccatcattggcatgcag
gtttttggaaatatcaagctgaatgatgagagccacataaaccagcacaacaacttcaag
accttcttcagcgcattaatgctactcttcaggagtgcaacaggagagtcttggcaggag
atcatgttgtcgtgtctggccgggcaggagtgtgagcctgatccctccatcgcccctccg
ttcatctctcctgatcacgaggggggctgtggtacagacttcgcctacttctacttcgtt
tcattcatcttcttcagttctttcctgatgttaaatctcttcgtcgctgtgattatggat
aatttcgaatacctgactcgggattcctccattcttgggccccaccacctggatgagttt
gttcgaatctggggggagtatgatcgagcagcatgtggccgaatccattacaatgccatg
tatgagatgcttacacacatgtcgccccctcttggtctcggtaagaagtgcccagccaaa
attgcatataagaggctggtactgatgaacatgcctgtggacgaggacatgtctgtccac
tttacctccacactgatgtcactgatccgcactgccctggaaatcaaaatcgcccgaggt
ggagaagatcgggtgcagttggacactgaactgcagaaagagattagtgtgatctggcca
catctgtcccagaagaccttggacctgttggtgcccatcaataaagatacagacatgacc
gttggtaaaatctacgcctccatgatgatcatggattacttcaaacagagcaaagctaag
aagctgaggcagcaagctgaggagcagtccagcagtcccgcccttcctttaatatcccac
agtgcaggatctgccttaaccagtggtggctttgtggccttgagccccatatcacctcag
gaactcctaatgcagcctgccacagatcaccaagaagacagtgaggaaaatcaaggctct
gtggctgaggagcaggaaatgaatggaatgtggaaagaggagcagccacccgagcgcttc
taccgacccagacacaagagctacaaagctgcagtctcccattcagagcaggcccacctg
gaacgaggcaggtccaaggagcagcgccacctgctgtccccaaaaaattcccgctttaac
tcaaatgagagaagttccaagtcgtgctcacggtctccaagtgaggaaagaaggcatggc
ctccccagacagggcaacagctcggacagcccagtcccctccacctcagagtccagcacc
ccgagcgggaagcgtcggctgtcccagacgcccacacgcacacaccctcacatctcctac
tcacccctggtgtgccacactcacccttcctcgcaggccgacgatgaggaagaggaggag
gagcaaagcggcccacccatgctggggtgctgcagcaatgccctgtgggacgagaatgca
gaggaggtgaaagtaagggttgaggaggaggaggaggaggaagaggaagagggcacacac
tcggaacaggaggagttcctgggctccagcgcccgccgttacccctctgaaccctacctc
gccctgcaggatgaggagcacagccctgactccggccccatggagactctgacctttgag
gcggcggtggccaccagcttgggacgctccaacaccatcaccgcctcggtgcgcacccgc
tcccgcctgggctggcaggtccccaacggacacttccgcaaacggctggcccagagcgtc
tccgttgccgggtgcgaggctctcagtgatacggaggacgataaatactag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (70)   
   KEGG ORTHOLOGY (1)   
   RefGene (65)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (81)   

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