KEGG   Astyanax mexicanus (Mexican tetra): 103024927
Entry
103024927         CDS       T05042                                 
Name
(RefSeq) laminin subunit alpha-3 isoform X1
  KO
K06240  laminin, alpha 3/5
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex04510  Focal adhesion
amex04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:amex00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    103024927
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    103024927
SSDB
Motif
Pfam: Laminin_G_2 Laminin_G_1 Laminin_I Laminin_II Laminin_G_3 Laminin_EGF PHM7_cyt
Other DBs
NCBI-GeneID: 103024927
NCBI-ProteinID: XP_022525349
Ensembl: ENSAMXG00000017948
Position
5:13562232..13590417
AA seq 1733 aa
MSCVWGLLLCCLTGPWLCNADQKTPYGYVQFMQSSGEHRLRQSSRKYCDHSAGAITKPCG
PGQYRERWGAYRGRCVPCNCNGLSHECDPISGKCHNCQLNTAGDQCERCAEGYYGSAVLR
TCQVCPCPFPDPYRSFALGCLQVGDQLECLCKPGYSGTRCERCSAGYYGDPVQVGGSCQL
CHCDHGYICDPLTGECEDPNNPSIDGDCQECDTCIQILLEELEMMDYELHQLKVDLEPFG
SSSAFLAALKKLEDAIKSTKLLVMKYSASVKLWEPKVKELEADVAGVRKDLSELSSKTDL
ASSVAEELLNNLDKTQLKGQNLLTDTEQLLKRIQEFLDQLKLSNSTIPSKDIVKMLKEAR
QMVSQMRKQNCDVQQKLAGDELEEAQKLLDYIMKNLTNPLNSTLAAADAIAQDLMSQIAD
LKDLEEALQQAEKTVNKTKQMNDGSEATLSDILKHRTKMEEEKHIVSADLAMIRGALNEI
IQVLMMMEEIKNDLAKFAAEIDGAETDLNLKLSELSKATALQGIVREAEEHAQDLMNLAM
HFQMSMLNYTNSSAVHKAVESINAYRDVIDALKKAEAAANEAHKAAEEALAEVKAQNLTV
TADELKNSANNLLDQAEKAENNLKEATQIYDTIKDRLDKAMAKERSMNEELQTTVKNMNQ
INRDDIATLINESKDAVQAANDTVSNTNAKLKNITEDLDKIRITGGVSNLDNILNDVNNT
LNELNSVFPELTDSLAEVEKQSSQVPNTTNMSDNLMRIKDMIEKTRDMANRIRGPILFSG
DSHVELRPPKNLEDLRAFTALNLTIHRPKVDTRKRRQSTEEEDNLFVLYLGNKNTQKDYV
GLVIRNSVLYCVYKLGGQIHEIKTKEITRSSVNGSFMDRVDFRRVYQDAEVIFTETYTSS
APRKLQPMTSQANTTISLLDLDRDEVVLYVGGYPNDFTPPKELQYPGFTGCIEFSTLNEY
ILGLYNFQKAVNIKNTDRCLRGEIRQIGQYFDGTGYGRINVQDSSKVIKFFLLSRQENAL
LFYMGNKDSYFTVTLEEGFVVLRVTQGDQRLTRKSDKKVFPLEYYQQIRILEDNSRTVDT
APYSVNVRFDFGTLHSADTQAFVGGIPAAIAARHNITHPPVRGCLKSLEVDIYVRFIEEV
GIVPGCPEDLLGLREASMELGSSLAFAPNITQSNTGTMVSLGFKSTQNSGVLLAYTDNKD
GGFELALIDGHLEMKDGANLLKSKNRYDEGGWHYVTAFRNSTGMELTIDNSDSTEIQTPP
LDALSADINVVLGKETFNGCLRNFYMRRLESNYIPADLSSFNKAGAVSLISCPAQRPPLA
ITEKSGLRRRGTVNGLDIMKEVQAERKAAKSHLKDFSQQVCSKPASLIQAYHLNARSQLQ
YNIRPAELNFRPHFSLDVQTRSANGLLLHIADKHDVSRVVLFMEGGRVKLSVGEGGLIHY
QKKINNGDWHNIRFSMEQNTFHLVVDGFRVTDGRLQKDEGISLGLQAPAYIGTGLAQSVS
RNHEKSFPKKSVIGCIRDVRFYEVLVGEPAVNHGGAPCFDGAAVKGAYFAGRGSHAALEK
YFILGADFNLTFEVRPENLTGLLFHSRGHHGHSLSVFLKKSKMVVQMNDGAGDYSISVTP
PSTLCDHTFHHVTVTKTGNVMRLKMGRESNHAVGPSVHSYSLVTRDTLYIGGVPDRKRKR
VPVWSSFVGCMRNVRINQEPVSFDTITSVFGPVNTNECPEDQQQTSGGQKPRH
NT seq 5202 nt   +upstreamnt  +downstreamnt
atgagctgtgtgtggggacttctgctctgctgtctgactggaccgtggctttgtaacgcg
gaccagaaaactccatatggttatgttcagttcatgcagtcaagtggtgagcatcggttg
cgacaatcttctagaaagtactgtgaccactctgctggggcaattacaaagccctgtggt
cctggacagtaccgtgagagatggggagcctacagaggtcggtgtgtgccctgtaactgc
aatggcttgtcccatgagtgtgaccctatttcaggaaagtgccataactgccagctgaac
acagcaggtgaccaatgtgagcggtgtgcagagggttactatggtagtgcggttctccgg
acctgccaagtgtgtccatgtcccttcccggacccgtatcgtagttttgcacttggttgc
ctgcaggtcggggaccagcttgagtgcctgtgcaagccaggttattcaggaactcgctgt
gaaaggtgctctgctggatactacggtgatccagtacaggttggagggagttgccagctc
tgtcactgtgatcatggatatatatgcgaccccctcacaggcgagtgtgaagatccaaac
aaccccagtatagatggtgactgccaagagtgtgacacctgcattcagatattactagaa
gaactagaaatgatggattatgaactccaccaactgaaggttgatcttgagccctttggg
agcagctctgcatttcttgctgctctgaagaaactggaagatgccattaaatctacaaag
ttgttagtgatgaagtacagtgcttctgtaaaactgtgggaaccgaaggtgaaggaactc
gaggcagatgtggccggggtcagaaaagacctgagtgaactcagcagcaagacagatttg
gcttcatcagttgctgaggagttgttaaataatttagacaaaactcagctgaaaggccaa
aaccttctcactgatacagagcagcttctgaaaagaatacaagagttcctggatcaactg
aaattgtctaatagcaccatacccagtaaggatattgtgaagatgttgaaggaagcgaga
cagatggtgtcacaaatgcgaaagcaaaactgtgatgtgcagcagaaattggctggggat
gagctggaggaagctcaaaaacttttagattatatcatgaagaatctaacaaatcccctg
aacagcacactggctgctgctgatgcaatcgctcaagacctcatgtcccagattgctgat
cttaaagatcttgaggaagctctgcaacaggcagagaaaactgtgaacaagaccaaacag
atgaatgatgggagtgaggcaaccctgtcagacattctgaaacatcgtacgaagatggaa
gaagaaaaacatattgtctctgctgatttggcgatgattagaggagcactgaatgagata
atacaggttctgatgatgatggaagaaataaagaatgacttggcaaaatttgctgcagag
attgacggagcagaaacagatttaaatctaaaactcagtgagctttccaaagccacagcc
ctgcagggtatcgtcagagaggcagaggaacatgcccaggatctcatgaatcttgccatg
cattttcaaatgtctatgctgaattacaccaactcttcagctgtccataaagcagtggaa
tccatcaatgcttatagagatgtcattgatgctctcaaaaaggctgaagcagcagcaaat
gaagcccataaagctgcagaagaggctctagcagaggtgaaagctcaaaatctgacagtg
acggctgatgaactgaagaattctgcaaacaatttacttgaccaggctgagaaagctgag
aacaatctgaaagaggccacacagatatatgataccattaaagaccgtctagacaaggca
atggccaaagaaaggagcatgaacgaagagctccaaactactgtaaagaatatgaaccaa
atcaacagagatgatattgcgacactgataaatgaaagtaaggatgctgtccaagctgct
aacgacactgtgtccaacactaatgcaaagttaaagaacatcactgaggacttggataag
atccgcattaccggtggagtttcaaacctggataatatactcaacgatgtcaataataca
ttaaatgaactgaacagtgtattccctgagctcacggattcactcgcagaggtggagaag
cagagcagccaagttccaaacacaaccaacatgtcagacaatctcatgaggatcaaggat
atgatcgaaaagaccagagatatggccaacagaatcaggggtcccatcttgttctctggt
gatagccacgttgagctgcgtccacccaaaaacctggaagatctacgagccttcacagcc
ctcaacctgactatccaccggcccaaagtagacactcgcaaacgccgccagagcacagag
gaggaagacaatctattcgtcctttacctgggaaacaagaatacccagaaggactatgtt
ggattggtgattcggaacagtgtgctttattgtgtgtacaaacttgggggacaaatccat
gaaataaagaccaaagaaatcaccaggtccagtgttaatggctcatttatggatagagtg
gacttccgcagagtctaccaggatgcagaagtcatcttcacagagacctacacctcctct
gcacccagaaagctgcagccgatgacaagtcaagctaatacaactataagcttgctggac
ctggaccgtgatgaggtggtcttgtatgtcgggggctatccaaatgacttcactccacca
aaggagctccaatatccaggctttacaggatgcattgaattttccacattaaatgaatat
atcctcggcctctacaacttccagaaagctgtcaacataaaaaatacagaccgatgtcta
agaggtgagatccgtcagataggacagtattttgatggcacaggctacgggaggatcaac
gtacaagacagcagcaaagttatcaaattcttcctcctgagtcgacaagaaaatgctctg
ctgttttatatgggtaacaaggattcctatttcactgttactctggaggaaggctttgtt
gttttgcgggttacgcaaggagaccaaaggttaactcgaaagagtgacaaaaaagtcttc
cctttggaatactaccaacaaattcgaattctcgaagacaacagccgtactgtagatact
gctccatattctgtcaatgttcggtttgattttgggactctacactctgcagacactcaa
gcttttgtaggtggcattccagcagcgattgcagcaaggcataacatcacccacccacct
gtgagaggatgcctgaaaagccttgaagtggatatttacgtcagattcatagaggaagtc
ggaattgtccctggttgtccagaggatttactgggtttgcgagaagcttctatggagctg
ggaagctctcttgcttttgctccaaacatcacccagtccaacacaggaactatggtttca
ctggggttcaaatccacccagaacagcggagtcctgcttgcatacactgacaataaggat
ggaggatttgagctggctctgattgacggccatttggagatgaaagatggcgcgaacctt
ctgaaatccaagaacagatatgatgagggagggtggcactatgtgacagctttcaggaac
agcactggaatggagctgactatcgataattcggacagcacagaaatacagacacctccc
ttagatgccttatccgctgacataaatgttgtattgggaaaagaaaccttcaacggctgc
ctaaggaacttttacatgaggagattggagagcaattacatcccagctgatttgagcagt
ttcaataaggcaggagctgtgtctttaatatcatgtccagcacagcgccctcctctggcc
atcactgagaaaagcggcctcagacgcagagggacagttaatgggctggacatcatgaag
gaggttcaggcagaaagaaaagctgcaaaaagccacttaaaggatttttctcagcaagtt
tgtagtaagccagccagtttaatccaagcatatcacctcaatgccagaagtcagctacaa
tacaacatacgtccagcggagctcaattttagacctcatttctccctggacgtgcaaacc
aggtcagccaatggtctgctgcttcacatcgcagacaagcacgatgtctctcgagtggtt
ttattcatggagggtggcagggtcaaactctccgttggagaaggaggactgatccactat
caaaagaagattaataatggcgactggcacaatatcaggtttagtatggagcagaacaca
tttcaccttgtggtggatggcttccgggtgacagacggacggctgcagaaggatgaaggg
atttctctggggctacaggcgcctgcctacattggaactggattggctcagtcagtcagc
agaaatcatgagaaatccttccctaagaagagtgtgattggctgtatccgtgatgtcagg
ttttatgaagttctggtaggagaaccagctgttaatcatggtggtgccccatgttttgat
ggtgcagcagtaaagggggcatatttcgctggtcgtggatctcatgctgctttagagaag
tactttatactgggtgctgattttaacctcacatttgaggttcgcccagaaaatctcacc
ggcttactgttccacagcagaggccatcatggacacagcctcagtgtttttctgaaaaag
tccaagatggtggtgcagatgaatgacggagcaggagattacagcatttcagtcactcct
ccatcaacgctgtgtgatcacaccttccatcatgtgacagtgaccaaaactggaaatgtt
atgaggctaaagatggggagagaatctaatcatgctgtcggaccttctgtgcattcctat
tccctcgtgactcgtgacacactttacattggaggtgtcccagacaggaagcgtaagagg
gtccccgtgtggagctcctttgtgggttgcatgaggaatgtgagaatcaatcaggagcct
gtttcttttgacactattaccagtgtttttggccctgtcaacacaaatgagtgcccagaa
gaccagcagcagaccagtgggggtcagaaacccagacactga

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (78)   
   KEGG ORTHOLOGY (1)   
   RefGene (73)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (7)   
   Pfam (7)   
All databases (93)   

Download RDF
DBGET integrated database retrieval system