KEGG   Astyanax mexicanus (Mexican tetra): 103025705
Entry
103025705         CDS       T05042                                 
Symbol
tsc1
Name
(RefSeq) hamartin isoform X1
  KO
K07206  tuberous sclerosis 1
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex04140  Autophagy - animal
amex04150  mTOR signaling pathway
amex04218  Cellular senescence
amex04910  Insulin signaling pathway
amex05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:amex00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    103025705 (tsc1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    103025705 (tsc1)
  09143 Cell growth and death
   04218 Cellular senescence
    103025705 (tsc1)
 09150 Organismal Systems
  09152 Endocrine system
   04910 Insulin signaling pathway
    103025705 (tsc1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    103025705 (tsc1)
SSDB
Motif
Pfam: Hamartin LPP
Other DBs
NCBI-GeneID: 103025705
NCBI-ProteinID: XP_007230553
Ensembl: ENSAMXG00000016096
UniProt: A0A8B9M424
Position
Unknown
AA seq 1148 aa
MAKEQPNVFDLLPLLESTDLQDLEQVKSLLQENLSTDKGSLLVHGLVDYYLDTSSPQAVD
ILSSIREPHDKHLLDKMNECMAKQGCRLPTLTLLGHVVRKQPSWIHKIPRFPLLASLLKC
LKTESDIVVLITGVLVLIIILPMIPQTSKQLLFEFFDIFGRLAAWNQRNPGHAQGVYAVH
LHASVYSLFHRLYGMYPCNFVSYLRAHYSMKENVDTFEEVVKPMLEHVRIHPELVTGTKD
YELDPIRWKRFETHDIVIECAKVSLDPKEASCEEGYSSLPDHVPRRPVDHSRSFSDLSSH
GRSSFNSMATVRQSLSLSLPHLTVSQHACLSPQTPSLQGAEVTSSGMKEALWSPSSVCGM
STPPSSRGMSPTTVTDLSHSASHLSGRIPGTPVDGKWTPSASTPSGSSPLPSLSEELEHT
VQTTSTTLPPAKANQEPIKELKKGTPTNINSKGVAADGLSPITLTELPDFVKTTERDREE
DAITEELRTITQSKVDLLPKPALDSSFSSTTDSILPLNPSNDVLPCNLASTPERATNPAE
GVDQHPPLSFWPCFTPIENSFSPCAADDPLVELSKGTCPYEPLFDLALPRLACLFVGKKM
VEAQQKAGGHSEHREELEGEDLSTTSPLEVLDRLIQQGYDLHEKVLKRSPSLSSQSSESH
SGGKHHSTKGKGVSPGAPDELALLRSQLLLLHNQLLYERHKREQHALRNRRLLRRVINAT
ALEEQNNSMKAQLRLQEVETQALRVSLQEEQQRSKNLHQDHEALVQQLHSQVQQLQQERN
EYHTKTQELQSDLQESQKRIGEMEAELQRANNKLCNTGHLLSQLSIKLNSSESMEQQMAF
LNKQLLLLGEANKLCVEEIQRLGPEADKEHKMLQACSAREVERLRQSSIQQSQRLEAAQQ
RITDLEAQLTKKEHLILEQKKLLENVKSQAKGQLQASENRYLAQKHVTQALQSELLQLYS
QIEINNLANSTPAGGTTEPSSPPKQSSNGNNTGPSTPAQTSEPSKREESSYMCVNGDLSL
GSPPLTALINGSQEEDLSVLSCNSPLDVGSCPSAQSFLGIHNQELLNKRKSQYEEEPAPL
ISLSHGLQDPSLEPADKPQLGTSTEGTAAQALQEPPDLQPVDRPRARAYNIQRRRQQDLR
IMDYNETH
NT seq 3447 nt   +upstreamnt  +downstreamnt
atggccaaggagcagccaaacgtgtttgacctcctccctctgctggagtccacagattta
caagacctggagcaggtcaaaagtctgttacaggagaaccttagcacagataaaggatct
ttgctcgtgcatggccttgtggattactatttggacaccagctctcctcaggctgtggac
atcctgtcctccatcagggagcctcatgacaagcaccttttggacaagatgaacgagtgc
atggccaagcagggctgcagactaccaaccctcaccctcctcggccacgttgtccgcaag
cagccgtcgtggatccacaagatccctcgcttccctctgcttgcttcactgctcaaatgc
ctcaagactgagtccgatatcgtggttctcattactggagtgctggtgttgatcatcatt
ctacccatgataccacagactagcaaacaactcctgtttgagtttttcgatatctttgga
cgtctggcagcttggaatcagagaaacccaggccatgctcagggagtgtatgcggttcac
cttcatgccagcgtttattcactcttccaccgactttatggcatgtacccttgcaacttt
gtgtcctacttgcgagcccattacagtatgaaggaaaatgtggacacgtttgaggaggtg
gtcaagccaatgctagagcatgtgcggatacatccagaacttgtcactggaaccaaagac
tatgaactggaccccattaggtggaagaggtttgaaacccacgacattgtgattgaatgt
gccaaagtttccctggacccgaaggaggcgtcttgtgaggaaggctactcgtccctgcct
gaccacgtcccgcgccgccctgtcgaccacagcaggtccttctcagacctcagcagccat
ggaaggtcttctttcaactccatggccacagttcgccagtccctttccctttctttgccc
catctcacagtcagccagcatgcatgcctcagcccacagacccccagcctgcagggtgct
gaggtgacgtcctcagggatgaaggaggccttatggagtccttcctcagtctgtggcatg
agtacccctcccagctctagaggaatgtcccccaccaccgtcaccgatctctcacacagt
gcctcgcacctctcgggacggatccccggcacgccagtggatggaaagtggactccatct
gcctccacgccctcagggtcctctcctctcccttcactctctgaggagcttgagcacact
gtacaaaccaccagcactacgcttcctccagctaaggcgaatcaggagccaattaaagag
cttaaaaaaggcacacccacaaatatcaatagcaagggggttgcagctgatggcttgagt
cccattacgttaacagagctccctgactttgtgaaaacaacagaacgggacagagaggaa
gatgccatcacagaggagttacggacaataacccagtccaaggtggatcttttgcccaaa
ccagcactggactcctccttctccagcaccacagactccattctccctttaaaccccagc
aatgatgtcctgccctgtaatctggcctccacgccggagagagccacaaatcctgctgaa
ggagtggatcagcatcctcccctttccttctggccttgtttcacaccaatagaaaactcg
ttcagcccttgtgctgcagatgaccccttagtggagctgtccaaggggacgtgtccctac
gaaccgctgtttgacctggccctgcccagactggcctgtctgtttgttgggaagaagatg
gtggaggcccagcagaaggctggagggcattcagagcaccgagaagagctggagggggaa
gatctctccaccacgtctcctctagaggtgctggatcgcctcatccaacagggctatgac
ctccatgagaaagtgttgaagagatcaccttctctgtcaagccagtcatctgagtcacac
tctggaggtaaacatcatagcactaaaggaaaaggtgtaagtccaggagctcctgatgaa
ctagcattgctgcgcagtcagctgctgctactgcataaccagctgctttatgaaaggcac
aagagagagcagcatgcgctgcggaaccgccgccttctccgccgtgtcatcaacgccacc
gcactggaggaacagaacaactctatgaaggcccagctgcggctgcaggaggtggaaacc
caggctttaagggtaagcctgcaggaagagcaacagcggtcaaaaaatcttcatcaggat
cacgaagcactggtgcagcagctccatagccaggtccaacagctccagcaggagaggaac
gagtaccacaccaagactcaggaactgcagagtgacttgcaggagagccagaagagaata
ggtgagatggaggcggagctgcagagagctaataacaagctgtgtaacacaggacacctg
ctcagtcagctgtctatcaaactcaacagcagtgaaagcatggagcagcagatggccttc
ttgaacaaacagctgttactgctaggggaagccaacaaactgtgtgtggaggaaatccag
cgcttagggcctgaagcggataaggagcacaagatgctgcaggcatgttctgcgcgagag
gttgagaggttaaggcagagctccatacagcagagccagaggctggaggcagctcagcaa
cgaatcacagacctagaagcccagcttaccaagaaagagcacctcattctggagcagaag
aagctgctggaaaatgtcaaaagccaggccaaggggcagctgcaagcttcagagaacagg
tatctggcccagaagcatgtgactcaggcactgcaatcagaactgctgcagctctacagt
cagatagagatcaacaacctcgctaacagcacaccagcagggggcacaactgagcccagc
agccctcccaaacagagctcaaatggcaataacacaggaccttccaccccagcccaaact
tctgagccgagcaagagagaggagagttcctacatgtgcgtcaatggagacctttcactt
ggatctccaccgctcaccgcattgatcaacggcagccaggaagaagacttgtctgtcctg
tcctgtaactccccgctggacgtcggctcctgtcccagcgcccagagctttctggggatt
cacaaccaagagctgctgaataagaggaagagccagtatgaggaggagccagcacccctc
atcagcctgtcccacggtctgcaggaccccagcttagaacctgcagacaaaccccagctc
ggcacgagcactgagggcacagcagcccaggccctgcaggagccacccgacctccagccc
gtggatcggcccagggcccgggcctacaacatccagcggaggaggcagcaggacctgcgc
atcatggactacaacgagacccattag

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (49)   
   KEGG ORTHOLOGY (1)   
   RefGene (44)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (2)   
   Pfam (2)   
All databases (65)   

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