KEGG   Astyanax mexicanus (Mexican tetra): 103025825
Entry
103025825         CDS       T05042                                 
Symbol
sap18
Name
(RefSeq) histone deacetylase complex subunit SAP18
  KO
K14324  histone deacetylase complex subunit SAP18
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex03013  Nucleocytoplasmic transport
amex03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:amex00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    103025825 (sap18)
   03015 mRNA surveillance pathway
    103025825 (sap18)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:amex03019]
    103025825 (sap18)
   03036 Chromosome and associated proteins [BR:amex03036]
    103025825 (sap18)
Messenger RNA biogenesis [BR:amex03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     103025825 (sap18)
Chromosome and associated proteins [BR:amex03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    Sin3A-HDAC complex
     103025825 (sap18)
SSDB
Motif
Pfam: SAP18
Other DBs
NCBI-GeneID: 103025825
NCBI-ProteinID: XP_007255657
Ensembl: ENSAMXG00000005630
UniProt: A0A8B9HAM2 A0A3B1ILE5
Position
19:21792617..21795851
AA seq 153 aa
MAVESRVTQEEIKKEPEKPVDREKTCPLLLRVFTTNNGRHHRMDEFARGNVPSSELQIYT
WMDATLKELTSLVKEVYPEARKKGTHFGFAIVYPDPKRPGYRVKEIGNTVSGRKGADDSM
TLQSQRFQIGDYLDIAITPPNRAPPMPGRMRPY
NT seq 462 nt   +upstreamnt  +downstreamnt
atggctgtggagtcgagggtgacccaggaggaaattaagaaggagccggagaagccggtc
gatagagaaaagacgtgtccgctgctgcttagagttttcaccacaaataatgggaggcat
cacagaatggacgagtttgcccgaggaaatgtaccatcaagcgagcttcagatttacacc
tggatggacgccaccctgaaagagctgaccagtctagtaaaggaggtttatcctgaggct
cgaaagaaaggcacacacttcggctttgctattgtttatccagaccctaaaagaccaggc
tacagggtcaaagaaatcggtaacacagtatctgggcgcaagggtgcagatgactcgatg
accctgcagtctcagcgctttcagataggagactaccttgacattgccattactcctccc
aaccgtgctcctcctatgccaggccgtatgagaccctactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (22)   

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