KEGG   Astyanax mexicanus (Mexican tetra): 103027415
Entry
103027415         CDS       T05042                                 
Name
(RefSeq) interferon regulatory factor 1-like
  KO
K09444  interferon regulatory factor 1
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex04625  C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:amex00001]
 09150 Organismal Systems
  09151 Immune system
   04625 C-type lectin receptor signaling pathway
    103027415
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:amex03000]
    103027415
Transcription factors [BR:amex03000]
 Eukaryotic type
  Helix-turn-helix
   Tryptophan clusters interferon-regulating factors
    103027415
SSDB
Motif
Pfam: IRF Mob_Pre
Other DBs
NCBI-GeneID: 103027415
NCBI-ProteinID: XP_007233990
Ensembl: ENSAMXG00000010595
UniProt: A0A8B9LB81 W5KTH1
Position
14:29153396..29156158
AA seq 310 aa
MPVSRMRMRPWLEDKIDSNTIAGLVWVDKDQKMFSIPWKHAARHGWEVDKDACLFKQWAI
HTGKFKEGVTEPDPKTWKANFRCAMNSLPDIEEVKDKSINKGCEAVRVYRMLHVMKNKGK
RLSGTLDGRRRRKAPKVKQETMNIDESSTGETTYSKQEDTITQENTIDSTENLSTAPSSF
EVPDCSGYEVEIGPDSTNDYTSRFQVSPVHSTDYEENQAIVEITRQLELDSTQWLQSNSS
GKGFLCNEVGMAESFHSPESQWSDNSGEEIELRFYTELSSGFPSDDMLSYTELWNSNQHT
NSFPQISCPL
NT seq 933 nt   +upstreamnt  +downstreamnt
atgcccgtgtccagaatgcgcatgcgaccctggctggaggataagattgactccaacacc
atcgctggactcgtttgggtggacaaggatcagaaaatgttctccattccttggaagcac
gctgcccgtcacggctgggaagtggacaaagacgcttgtttgttcaaacagtgggccatt
cacacaggcaagtttaaggagggggtgaccgaacccgatcccaaaacctggaaagccaat
ttccgttgtgccatgaactccctgccagacatcgaggaggtgaaagacaaaagcatcaac
aaaggttgcgaggctgtccgggtttaccgcatgctgcacgttatgaagaacaaaggcaag
cggttgtcaggaaccctggatggcaggaggaggagaaaggcaccgaaagtgaagcaggag
acaatgaacatagatgaatcatcgacaggagagacaacttacagcaagcaggaggacacc
atcactcaggagaacaccatcgacagcactgagaatctaagcaccgctccctccagtttt
gaggtgccggactgctccggctatgaagtggaaattggccctgacagcacaaacgactac
accagcaggtttcaagtttcaccagttcactcaacagactacgaggaaaaccaagctatt
gttgagattacacggcaattggaacttgatagcacgcagtggctacaaagcaatagcagt
ggaaaggggttcctgtgcaatgaagtaggcatggcagaatctttccacagtccagagagc
cagtggagtgataattcaggtgaggagatagagctgcgattttacacagaactgagctca
ggctttcccagtgatgacatgctaagctacacagaactgtggaacagcaaccagcacacc
aacagcttcccacagatcagttgtcctctctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (24)   

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