KEGG   Astyanax mexicanus (Mexican tetra): 103027770
Entry
103027770         CDS       T05042                                 
Symbol
polr2l
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC5
  KO
K03007  DNA-directed RNA polymerases I, II, and III subunit RPABC5
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex03020  RNA polymerase
amex03420  Nucleotide excision repair
amex04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:amex00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    103027770 (polr2l)
  09124 Replication and repair
   03420 Nucleotide excision repair
    103027770 (polr2l)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    103027770 (polr2l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:amex03021]
    103027770 (polr2l)
   03400 DNA repair and recombination proteins [BR:amex03400]
    103027770 (polr2l)
Transcription machinery [BR:amex03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     103027770 (polr2l)
  RNA polymerase III system
   RNA polymerase III
     103027770 (polr2l)
  RNA polymerase I system
   RNA polymerase I
     103027770 (polr2l)
DNA repair and recombination proteins [BR:amex03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      103027770 (polr2l)
SSDB
Motif
Pfam: RNA_pol_N
Other DBs
NCBI-GeneID: 103027770
NCBI-ProteinID: XP_015464072
Ensembl: ENSAMXG00000003276
UniProt: A0A8B9JBS0 A0A3B1IS91
Position
5:1420391..1427117
AA seq 67 aa
MIIPVRCFTCGKIVGNKWEAYLGLLQAEYTEGDALDALGLKRYCCRRMLLSHVDLIEKLL
NYAPLEK
NT seq 204 nt   +upstreamnt  +downstreamnt
atgattatcccagtgcgatgcttcacctgcgggaagattgtgggcaacaagtgggaggct
tatttaggtctccttcaggcagagtacacagagggtgatgctctggatgctcttggactg
aagcggtactgctgcaggaggatgctgttgtctcacgtcgatctcattgagaagttactg
aactacgcgccgctggagaaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (43)   

Download RDF
DBGET integrated database retrieval system