KEGG   Astyanax mexicanus (Mexican tetra): 103028778
Entry
103028778         CDS       T05042                                 
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent N-type calcium channel subunit alpha-1B-like
  KO
K04849  voltage-dependent calcium channel N type alpha-1B
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex04010  MAPK signaling pathway
amex04020  Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:amex00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    103028778
   04020 Calcium signaling pathway
    103028778
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:amex04040]
    103028778
Ion channels [BR:amex04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   103028778
SSDB
Motif
Pfam: Ion_trans GPHH Ca_chan_IQ PKD_channel Phage_TAC_15
Other DBs
NCBI-GeneID: 103028778
NCBI-ProteinID: XP_022523265
Position
Unknown
AA seq 2393 aa
MARFEDDLPARYGGTGSPSSGQGGRGASRQPGPPCVQRMYKQTMAQRARTMAIYNPIPVK
QNCLTVNRSLFIFSEDNVIRKYAKKITEWPPFEYMILATIIANCIVLALEQHLPAGDMTP
LSQRLDDTEPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILTTVGAD
FDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLDFY
MGKFHRTCFRIDTGEQAAEFPCGEEAPARTCENGTRCDSYWIGPNFGITNFDNILFAILT
VFQCITMEGWVEILYNANDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERV
EKRQEFLKLRRQQQIERELTGYLEWICKAEEVMLAEEDKNAEEKSPLDGAWYKRKCNNPG
GNIFEVLKRSKKSKNDLINAEEGEDHFTDISSVAPQGSPFARASVKSSKLESSSYFRRKE
KRIRFFIRRMVKSQGFYWTVLCLVGLNTLCVAIVHYEQPEWLTYALYLAEFVFLGLFLTE
MSLKMYGLGPRNYFHSSFNCFDFGVIIGSIFEVIWAAVKPGASFGISVLRALRLLRIFKV
TKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEEETPTTNFDT
FPAAILTVFQILTGEDWNAVMYHGIESQGGVKRGMFSSVYFIVLTLFGNYTLLNVFLAIA
VDNLANAQELTKDEEEQEEAISKKLALQKAKEVKEVSPMSATNISLTAFIRPNGGALSHS
SSHSGCDSPSYVCSPAHHYLSNEQRRSLKMMSVWEQRTSQIRKHMRASNEALYSEELSPR
LASSHQHLRPDLTTHLDRPLVVEPRCWDEARNVPPQDPPPDPLTTDPAQSHPPRKHHRRR
ERASDDTQENGETTGNSRDGRRHVHHSRSNRDHEGTRCKEGKGERSRSREGARRHHHQQG
SAEDGRGGEREHRHHHSHRTSREGNGVLSSGGGRSERRSHHRDGSRSGTWDGERRGEDGT
NGGRRKHRQRTCKAQSTLDGEEQMENGEREEGKSPVHRHTEVGGDSLAATPQQPMMGSRW
GLEKPEDSDNQRNVSRTGGLGVHIPVTITSPPGETTLIPMNSIESETVPMTEKNLDEVNQ
SCPRPILPYSSMFIFSQSNPVRRLCHYIVSLRYFEMCILVVIAMSSIALAAEDPVQANAP
RNNVLKYLDYVFTGVFTFEMVIKMVDLGLLLHPGSYFRDLWNILDFIVVSGALVAFAFSS
FMGSHQSVNRPKRGTKGKDISTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLN
ILIVYILFMFIFAVIAVQLFKGKFFYCTDESKGLQKDCRGQFLDYDRDEVSAQPRVWKKY
EFHYDNVLWAFLTLFTVSTGEGWPTVLKHSVDATFEDQGPSPGYRIEMSIFYVVYFVVFP
FFFVNIFVALIIITFQEQGDKALSECSLEKNERACIDFAINAKPLTRYMPQNQQSFQYRM
WKFVVSPPFEYSIMIMIALNTVVLMMKFHGAPDFYEAMLKYLNIVFTALFSLECVLKIIA
FGPLNYLKDAWNVFDFVTVLGSITDILVTEINDRLLNLSFLRLFRAARLIKLLRQGYTIR
ILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIDLNEDTAINHHNNFRTFLQALM
LLFRSATGEAWHEIMLSCLSHRACDERSGTHGKECGSDFAYFYFVSFIFLCSFLMLNLFV
AVIMDNFEYLTRDSSILGPHHLDEFIRVWAEYDPAACGRIKYRDMYEMLLHMSPPLGLGK
KCPPRIAYKRLVKMNMPIAEDNSVHFTSTLMALIRTALEIKLASGMVAQRLCDAELKKEL
ATVWPNLSQKTMDLLVTPHKPNELTVGKVYAALMIFDYYKQNRAKRLQMQQQQSKEQTGP
GSQPNKVGALLEPILPLSPMQDKTKNSVVDCPSDPQPHRPGSTTLNNGRTLKSSHDGAIK
GSSSWVSEKTKEIHKSAKRRPISRGQSEDISNTNTAQVSVEMRNMENSANTVAPVGLDGQ
GRAVSMPKLNAEMQRSHSRHSPGTLLAPIPDSPMRRSASTFAPQRPPEVNLNEYTLEKPV
QERTHHHHHHHRCHHRRDRDKKQRSLDRSPSRQPLNSGGTAADLGGGTASTRERGHDRGR
SHERKHHSSTAEKQRYYSCDRYGSREHCPAKPAPASCATSPGEAQETAFSKQGSGWVKGS
PVLLSSGASTPSRGRRQLPQTPLTPRPAVAYKTANSSPVPFTGSQATLTAPPTPSRMSRG
LSEHNALLQCGSSPISPCPVTRICSEPFLGPPPPDHRYNFRPQLFQEPAGQIPWTTGQQI
VILPPPPSQQQQQQQQQQQPPHGLPNGYHYTLGVPSSDRAPPYYPEAEEDEWC
NT seq 7182 nt   +upstreamnt  +downstreamnt
atggcccgcttcgaagacgacctgccggcccgctatggagggacaggctccccgtcttcg
ggacaggggggaagaggcgcaagccggcagccgggccccccgtgcgtccagaggatgtac
aagcagacaatggcccagagagcccggacaatggccatatacaaccccatccccgtcaaa
cagaactgcctcaccgttaaccgctctctcttcatcttcagcgaggataacgtgattcgg
aagtatgcaaagaaaattacagagtggcctccatttgagtacatgatcctcgccaccatc
atagcgaactgcatcgtcctggccttggagcagcatttacctgcgggtgatatgaccccg
ctgtcacagcgactggacgacactgagccctactttattggcatcttctgcttcgaggct
ggaattaagatcatcgctctaggctttgcttttcataaaggctcctacctccggaacggc
tggaatgtaatggatttcgtggtggtgttgactgggattttgaccactgtgggggctgac
tttgacttgaggacgctcagggcagtgcgggtcttgcggccgctgaagctggtgtctgga
attcctagtcttcaagtggtcctcaagtccatcatgaaagccatggtgcctctgctgcag
attggcctgctgcttttctttgccatcctcatgtttgccatcattggcctggatttctac
atgggcaagttccaccgaacctgcttcagaatcgacacaggtgagcaggcggctgaattt
ccgtgtggggaggaagctccagctcggacctgtgaaaacggaacacgttgtgatagttac
tggataggccccaactttggcatcaccaacttcgacaacatcctctttgccatactcact
gtcttccagtgcatcaccatggagggctgggtggaaatcctttacaatgccaacgatgcc
tcagggaacacctggaactggctctacttcatcccccttatcatcatcggctcctttttc
atgctcaacttggttctgggagttctgtcaggggagttcgctaaagagcgtgaacgggtg
gagaagaggcaggagtttctgaagctgcgcagacagcagcagatcgagagagagctcaca
ggatacctcgagtggatctgtaaagcagaggaggtcatgctggcggaggaggataagaac
gcggaggagaagtctcctctggatggcgcctggtacaagaggaagtgcaacaacccaggt
gggaatatttttgaagtgttgaaaagatccaaaaagagcaaaaatgacctcatcaatgca
gaagaaggagaagaccacttcaccgacatctcatcagtcgcaccgcagggatctccgttc
gcccgggccagtgtgaagagcagcaagctggagagctcctcctacttccggaggaaagag
aagaggatccggttcttcatccgacgcatggtgaagtctcagggcttctactggactgtg
ctgtgcctggtgggcctgaacacactgtgtgtggctatagtgcattacgagcagcccgag
tggctcacctacgctctgtatttggcggagtttgtgtttctgggcttgttcttgactgag
atgagtctgaagatgtatggcctcggtcccagaaactacttccactcctccttcaactgc
ttcgactttggggtgattataggaagcattttcgaggtgatttgggctgcagtaaaaccc
ggggcctcttttggcatcagtgtgttgcgagctctgcggctgctcaggatcttcaaggtt
acaaagtattggaactctttacgaaacctggtggtctctctgctgaactctatgaagtcc
atcatcagcctgctcttcctcctcttcctcttcatcgttgtgtttgctctcttggggatg
caactgtttgggggccagtttaattttgaagaggaaactccaacaactaacttcgacaca
tttccagctgccatcctgacagtgttccagattttgacaggagaggactggaatgcagtg
atgtatcatggtattgaatctcagggaggagtgaagcgtgggatgttctcttctgtctac
ttcatcgtcctcactctgttcggaaactatactctcctgaacgtcttcttggccattgct
gttgacaacctcgccaatgcacaggagctcactaaggatgaggaggagcaagaggaggcc
atcagtaaaaagttggccctgcagaaagcgaaggaggtgaaggaggtcagccccatgtcg
gccactaacatctccctcacggcttttataaggccgaatggaggtgcactgtcgcacagc
tcctctcactccggctgtgattcaccgagttatgtctgctcccctgcccatcactacttg
agtaacgagcagcggcgctctctgaagatgatgtcggtttgggagcagcgcacctctcag
attcgtaagcacatgagggcgagcaacgaggcgctgtactccgaggagctcagcccccgt
ctggcctccagccaccagcacctccgccccgacctcaccacccacctggaccggccgctg
gtggtggagcctcgctgctgggacgaggccaggaacgtgccgccccaggacccgcccccc
gaccctctcacaacggaccctgcgcagtcgcatccgccccggaagcaccaccggcgacgg
gagcgggcatccgacgacacgcaggagaacggagagaccaccgggaactcgcgggacggc
cgccggcacgtccaccacagtcgcagcaacagagatcatgaggggacgcggtgcaaagag
ggcaaaggggagcgcagccgcagtcgggagggggcgcgacggcaccaccatcagcagggc
tcggcggaggacggcaggggcggagagagggagcacaggcaccaccactcgcacaggacc
agccgggaggggaacggcgtcctgagcagcggcggcgggaggagcgagagacgctcccac
cacagagacgggtcgcgctcggggacatgggacggagagagacgaggggaggacgggaca
aacggaggcaggaggaaacaccggcagagaacctgcaaggcccagtccacgctggacgga
gaggaacagatggagaacggagagagggaggagggaaagtctccagtacacaggcacaca
gaagtgggcggagactctctcgcagccactcctcagcagcctatgatggggagcaggtgg
ggtctggagaaacctgaggattcagacaaccaacgaaacgtcagtcgcacaggggggctc
ggagtccacataccggttaccatcacctctccaccaggggagaccacgctcatacccatg
aacagtattgaaagtgagaccgtgcccatgaccgagaagaacctggacgaggtgaaccag
agctgccctcgccccatcctgccttacagctccatgttcatcttcagccagtccaacccg
gtaagacgtctgtgccactacatagtcagtctgcgctattttgagatgtgtatcctggtg
gttatagctatgagcagcattgctctggctgcagaagatccggtccaggccaacgccccg
cgcaacaacgtgctgaagtatttggactatgtcttcactggtgttttcacgtttgaaatg
gtgattaagatggtggatctgggcttgctgttgcatcctggctcttacttcagggatctg
tggaacattctggacttcattgtggtcagtggagctctggtggcgttcgctttctcgagc
ttcatgggatcgcatcaaagtgtaaacagacccaaacgagggaccaaagggaaggacatc
agcaccatcaaatctctcagggtgttgcgagtcctgcggccactgaagaccatcaaacgc
ttaccaaagctgaaggctgtctttgactgtgtggtgaactccctgaagaacgtgttgaac
atcctcatcgtctacatcctcttcatgttcatcttcgccgtcatcgccgtgcagctcttc
aagggcaagttcttctactgcacagacgagtctaaaggactgcagaaagactgcaggggg
cagtttctggactatgatagagatgaggtttcagctcagcccagagtgtggaagaagtac
gaattccactacgataacgtgctgtgggccttcctcacactcttcaccgtttccacaggg
gaaggctggccaactgttttgaagcactctgtcgatgctacctttgaagaccagggtccc
agtccaggctaccgtattgagatgtccattttctacgtggtttactttgtcgtcttcccc
ttcttcttcgtgaacatcttcgtggccttgattatcatcacgttccaggagcagggggat
aaggccttgtctgagtgcagtctggagaagaatgagagagcctgtattgactttgccatc
aacgccaagccactgacccgctacatgcctcagaaccagcagtccttccaatacaggatg
tggaagttcgtggtgtcgccgccatttgagtactccatcatgatcatgatcgccctcaac
actgtggtcctcatgatgaagttccacggtgccccagacttctatgaggcgatgctgaag
tacctcaacattgtcttcacagcgctcttctcactggagtgcgtgctcaaaatcattgct
ttcggccctttgaattacctgaaggacgcttggaacgtgttcgactttgtgacggtgctg
gggagcattaccgatattctggtcaccgagattaacgaccgtctgttgaacctgagcttc
ctgaggctcttccgggcggcgcgtctcatcaagctcctccggcagggctacaccatccgc
atcctgctctggaccttcgtccagtccttcaaggctctgccttatgtttgccttctaatc
gctatgctgttcttcatctacgccatcataggaatgcaggtgtttggaaacattgatctg
aatgaggacactgccatcaaccatcacaacaactttcgcaccttccttcaagctctaatg
ctgctcttcaggagtgctacaggggaagcctggcacgagatcatgctgtcctgcctcagt
caccgagcgtgcgacgagcgctccggcacccacggcaaggagtgcggcagcgacttcgcc
tacttctacttcgtctccttcatcttcctctgctcctttctgatgcttaacctctttgta
gccgtaatcatggacaatttcgaatacctgacaagggactcctccatcctgggccctcac
cacctggacgagttcatccgagtgtgggctgagtacgacccggctgcttgtggccgtatc
aagtaccgcgatatgtatgagatgctgctccacatgtccccacctttaggtttgggaaag
aaatgtccgccacgaatcgcctacaagcgtctggtgaagatgaacatgcctatcgctgag
gacaactcggtgcacttcacgtctacgctcatggccttgatccgcactgccctggagatc
aagctggcttcaggaatggtggcgcagcgtctgtgtgacgcagagctgaagaaggagctg
gccaccgtctggccaaacctctcccagaagaccatggacctgctggtgactccacacaag
cccaatgagctcacggttgggaaggtgtacgctgctctcatgatctttgactactacaag
cagaacagagctaagagactgcagatgcagcagcagcagtccaaagagcagacaggccct
ggatcacagccgaataaagtgggagctctcctggagcccatccttcctctgtctcccatg
caggacaaaaccaagaacagtgtggtggactgcccctcagacccccagccccacagaccc
ggctccaccacgctcaacaacggacgcacacttaaatccagtcatgatggcgccatcaaa
ggttcctcatcctgggtgtcggagaaaaccaaagagatccacaagtctgccaagaggcga
cccatctccagaggccagtctgaagacatctccaacacaaacactgcccaggtgtcagta
gagatgaggaatatggagaacagtgccaacactgtagcacctgttggtttagatggccaa
gggcgtgcagtttcgatgcccaaactcaatgcagagatgcagagaagtcattcccgccac
tctccaggaactttactagcaccaattcctgattctcctatgaggcgctcagcttccacg
tttgcgcctcagcgccctccggaggtaaacctaaacgagtacaccctggagaagcctgtt
caggaacgaacacaccaccatcaccatcaccaccgctgccaccaccgcagagaccgagac
aagaagcagaggtcactggacaggtcacccagtcgccagcctctgaacagtggaggcacc
gcagctgaccttgggggtggtaccgcctcgacacgagagagggggcacgatcgaggccgt
tcccatgagaggaagcaccattcgtccaccgccgagaagcagcgctactactcatgtgac
cgctatggcagccgggagcactgccctgccaaacctgccccagccagctgtgccacctcc
cctggagaggctcaggagaccgccttcagcaagcagggcagtggttgggttaaagggagc
ccggtgttgttgagctcgggggcgagcacgcccagccgtgggcgcaggcagctgccccag
acgcccctgaccccgcgccccgcggtggcctacaagaccgccaactcctcccctgtgccc
ttcacgggctcccaggccaccctgaccgcccccccgacccccagcaggatgagccgcggg
ctgtccgagcacaacgccctgctgcagtgcggctccagccccatctctccctgtcccgtc
acccggatctgctctgaacccttcctgggcccgcccccgccggaccaccgctacaacttc
cggccccagctcttccaggagcccgcgggccaaatcccctggaccacagggcagcagata
gtgatcctccctcctcccccatcccaacaacaacagcaacaacagcagcagcagcagccg
ccccacgggctgcctaatgggtaccactacacgctgggcgtccccagcagcgacagggcc
ccgccctactacccagaagcagaggaagacgaatggtgctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (105)   
   KEGG ORTHOLOGY (1)   
   RefGene (101)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (5)   
   Pfam (5)   
All databases (125)   

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