KEGG   Astyanax mexicanus (Mexican tetra): 103029343
Entry
103029343         CDS       T05042                                 
Name
(RefSeq) fibronectin isoform X1
  KO
K05717  fibronectin 1
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex04510  Focal adhesion
amex04512  ECM-receptor interaction
amex04810  Regulation of actin cytoskeleton
amex04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:amex00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    103029343
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    103029343
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    103029343
   04810 Regulation of actin cytoskeleton
    103029343
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:amex04131]
    103029343
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:amex04147]
    103029343
   00536 Glycosaminoglycan binding proteins [BR:amex00536]
    103029343
   04990 Domain-containing proteins not elsewhere classified [BR:amex04990]
    103029343
Membrane trafficking [BR:amex04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   ER-Golgi intermediate compartment (ERGIC) proteins
    103029343
Exosome [BR:amex04147]
 Exosomal proteins
  Exosomal proteins of bladder cancer cells
   103029343
Glycosaminoglycan binding proteins [BR:amex00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   103029343
Domain-containing proteins not elsewhere classified [BR:amex04990]
 Fibronectin (FN) domain-containing proteins
  Fibronectin type I domain-containing proteins
   103029343
SSDB
Motif
Pfam: fn3 fn1 Pur_ac_phosph_N fn2 NDNF Arylsulfotran_N TDBD ASH
Other DBs
NCBI-GeneID: 103029343
NCBI-ProteinID: XP_022535960
Ensembl: ENSAMXG00000005593
Position
19:11279837..11309287
AA seq 2749 aa
MSGGRLATALAVALLAGAVSCMPKAAGKSRRQALEHSASSVSQDGCVEYGQFYGVGEQWE
RMYLGSVLVCTCNGVAGIKCKTKPEAEETCYDKVNARSYRVGETYERPKDGMIWDCTCIG
SGRGKISCTIANRCHEGGHSYKIGDTWRRPHDTGEYMLECVCLGNGKGEWTCKPVAERCY
DNTAGTSYVVGETWEKPYQGWMIVDCTCLGEGSGRITCTSRNRCNDQDTRMSYRIGDTWT
KTDARGHTLQCLCTGNGRGEWKCERHASLHTTGLGSGSRVITNVQPAVFQPVPIPVTPVE
GTCLTDSGVSYTLGMRWIKTQGSKQMLCTCLGTGVSCEEWEGHSRVYGGNTNGQPCVFPF
VSMGKTFYSCTSEGRSDGQLWCSTTSDFEKDHKYSFCTEKNVLVTTRGGNSNGALCQFPY
LYNGHNYTDCTADGRRDGMKWCSTTYNYDGEQRFGFCPMAAHEEVCTTSEGVMYRVGDQW
DKRHDVLGHMMRCTCVGNGRGEWSCIAYSQLKDQCIVDGLTYEVNQTFTKRHDEGYMMNC
TCFGQGRGRWKCDAIDQCQEPETRVFYQIGESWDKVIRGIHYRCHCYGNGIGELSCEPQQ
SFPGGNRPVQVIITEAGNQPNSHPIQWNAPPSVHITQYILKWRQKNTNAPWREVTLPGHL
NSYTIAGLKPGITYEGQLISILRFGRREVNRFDFSTTYGSLATSEGETAPPPPEIDTSES
VTEITSSSFVISWVSASDTVSGFRVEYELTEEGGQPGEPIVLDLPRTATSVNINELLPGR
KYTVNVYEVTDEGEPNLILTTSQTTAPDAPTDHEVEDIAETSIKVSWSRPVAPITGYRVV
YTPSVEGSSGSTELNLPDTATSVTLSDLRPGQLYNISIYAVEENLESEPVFVQVNTAGEP
LPEEIPSPTDLQFFEVSDSKITITWTGPPTEVSGFRVSVAQVGHDGLTERETQLPITHNA
YAEIAQLQPGTLYRFFIFALKGVEESEPLVGEQTTKPDTPTNFRLTNVTEDSALIIWSAP
RAQVTGYRLFLTVEGSNTKQMRIPGRLTQYTLLNLQPDTAYTATLHSEQGNVISEGAVAT
FKTSLPMGTAPRFSTDVTDTSIIISWSPVPRIGYRLTVRPSQGGEAPREVTSESGSIYVS
GLTPGVEYTYSVQPVINGHGHGNPITRRVVTPLSPPTDLNLETNPNTGELTVQWNDAKTP
DITGYRVTCTPTNGQQGNSVEEFVKAGQTSCTLENLSPGVEYNVSVFTVKDDMESVPVSS
TITPEPDTPTNFRLTNVTEDSALIIWSAPRAQVTGYRLFLTVEGSNTKQMRIPGRLTQYT
LLNLQPDTAYTATLHSEQGNVISGGAVATFKTSRPMGNAPRFSTDVTDTSIIISWSPVPR
IGYRLTVRPSQGGEAPREVTSESGSIYVSGLTPGVEYTYSVQPVINGHGHGNPITRRVVT
PLSPPTDLNLETNPNTGELTVQWNDAKTPDITGYRVTCTPTNGQQGNSLEEFVKAGQTSC
TLENLSPGVEYNVSVFTVKDDMESVPVSSTITPDVPQLTDLHYVNVTDSTIGLTWSPINS
TAITGYRITVVAAGESVPIFEDFVEATTGFYTVYGLEPGIDYDISIITVTESGQSEPTTI
TQQTAVPAPTGLAFTNVSTDSFTVTWKAPNVPKPADIDTYIIRYHPVDDEDDITERNVEG
NTNSVVLRHLLPNTEYFVSVFCVYEERESSPVISTQRTVLDSPVGLRFSEISTNSFTVHW
MPPQAIISGYRIRYQMTSGGRSKEERLPPSRSHLTLTGLAPETEYIINIYAVSGSHESKP
LTGTQSTISDAPTDLEVTSSTPDSITIRWDAPSVTVRYYRITHGESGGHGSPVEFTVPGS
QTTATIQGLRPGTDYTVTVYAVTGRGDSPASSTPIHVNHKTDIESPSEMEVTDVKDSTIT
VRWTPAVGPVSGYRITGTPRNGQGPTFSEVVAPDQTEITFSGLMPTAEYTLSVYALGQDG
ESPPLVETVVTTVDKPKDLTFSDVDSTSMLISWESPDGQVTSYRVLYSSPEEGERELFPA
PHGEDESAVLRGLRPGTEYTVNVIALHDRTPSPALVGTQTTAIPGPSDLQFSQIGSSSFT
VSWYSAANVQLTGYRVAITPKNKNGPTKEVHIAPDSTQYHATGLMPATDYEVEVYAVKNS
LTSRPVKGEVTTPDNISPPRRVRISNVKDSSVTLTWRSKTEAISGFLVEATPTIGGESPI
QRTIPSDSRTYTITGLQPGTNYKINIYTLNGNSRSEPFTLTATTAKPVISPPTNIRFTSL
TPTTISFSWEPPRSTITGYYITYEEAGSIPRELLPRPLAVRTSATITGLKPGTEYIIRIV
ALNNAQRSTPLLGKARTQLEDISPQLPVPHRPKQDILDVPEDENLNTNYVHVAGPNRQDT
LGQQGQHIYTEYQSFGLGNRGQQQPLAPHQGQPLVYIPLPGPDGHRVPVVKVSEGPAPGF
SFEFPLNETDLPQEAQTQTTITWQPVEHSDEYVVSCSPITEINEKTFQMHLPGSSNSATL
IGLTSGASYNIVVESVNGDHKQKVLQDVVTVGNTFPGPSAIPIGRDVCYDTFTATYHEVG
TEWERMSETGFKLWCRCLGLGSGHFRCDSSKWCHDNGHNYRIGERWDRRAENGHMMSCTC
LGNGKGEFKCEPHESTCYDEGKMYQVGNQWQKEYLGAICTCTCYGGQQGWRCENCRRPGA
EVNVDLIQPPIHTDVYDRYRENALRKLNIQCPIECLRPDLLADAQSPSE
NT seq 8250 nt   +upstreamnt  +downstreamnt
atgtccgggggcaggttggccacggcgctggcggtggctttactagccggggcggtgagc
tgcatgcccaaagccgcggggaaaagcaggagacaagccctggagcactccgcctcctca
gtgtctcaagatggctgtgttgaatatgggcagttttatggagttggtgagcagtgggag
cgcatgtatctgggcagtgtactagtctgcacttgtaatggagttgctggcattaagtgt
aaaacgaaacctgaggctgaggagacctgctatgataaagtgaatgctcgctcataccgg
gtgggagagacctacgaaagaccaaaggatgggatgatctgggattgtacatgcattggc
tccggcagaggaaaaatcagctgcaccattgccaaccgctgtcatgaaggggggcactct
tataagattggagacacctggagaaggccccatgacactggagaatatatgctggagtgt
gtatgtttgggcaatggcaaaggagaatggacctgcaaacctgttgctgagcgctgctat
gacaatacagctggcacctcttatgtggttggtgagacctgggagaagccataccagggc
tggatgatcgtggactgcacctgtcttggggaaggaagtggacgcattacttgcacatcc
agaaaccgctgtaatgaccaggatacacgcatgtcctaccgcattggagatacgtggact
aagacagatgctcgtggacacacattgcagtgtttgtgtactggtaatggcagaggagag
tggaaatgcgaacgacatgcttctttgcacactactggcttgggctctggatccagagtg
atcaccaatgtgcaaccagctgttttccagccagtgcccattccagtgactcctgttgag
ggcacatgtctgacagactcaggggtgtcctacactttgggaatgcgctggatcaagact
cagggaagcaagcagatgctgtgtacctgcctcggcactggtgtcagctgtgaagagtgg
gagggccattctcgtgtttatggaggtaacactaatggccagccttgtgtgttccccttt
gtatccatgggcaagaccttctactcctgcacctctgagggacgcagtgatgggcagctc
tggtgcagtactacctcagactttgaaaaagaccacaaatactccttctgtacagagaag
aatgttttggtcacaaccagaggaggaaactctaatggtgccctgtgccaattcccatac
ctctataatggccataactacactgactgtactgctgatggacgcagggatggcatgaag
tggtgcagtaccacctataactatgatggagagcagaggtttggcttctgcccaatggct
gcccacgaggaagtttgcaccaccagtgagggagtgatgtaccgtgttggagatcagtgg
gacaaacgccatgatgttttggggcacatgatgcgctgcacatgtgtgggaaatggtcgc
ggggagtggagctgcattgcctactcacagcttaaagaccagtgcattgtggatggtctg
acttatgaggtgaaccaaaccttcactaagcgccatgatgaaggatacatgatgaactgc
acctgtttcggtcaaggccgtggacgctggaagtgtgacgccattgaccagtgccaggag
ccagaaactagagttttctatcagatcggagagtcctgggacaaggtcatccgtggaatc
cactacaggtgtcactgttatggcaatgggattggagagctgagctgtgagccccagcag
tctttccctggtggtaaccgtccagtccaggtgattattacagaagctggcaaccagccc
aactcccaccccatccagtggaacgcaccaccctcggttcacatcactcagtatatcctc
aagtggagacagaaaaacactaatgctccatggagggaggtcactcttccaggtcatctg
aactcttacaccatagcaggactgaagccaggcattacctatgagggacagctcatcagt
atcctacgctttggacgcagagaggtcaatcgctttgacttctctaccacctacggttcc
ttggctacatctgagggagaaacagctcctcctcctccagagattgacacctctgagtct
gtgactgaaatcacctccagcagctttgttatctcctgggtgtctgcctcagacactgtg
tctgggttcagagtggaatatgagctaactgaggagggaggccaaccaggggagcccatt
gtcttggacttgccacgtacggctacatctgtaaacatcaatgagctgttgccaggcaga
aaatacactgtgaatgtgtatgaagtcactgatgagggagaacccaacctgatcctcacc
acctcccaaacaacagctccagatgctcccacagatcatgaggtggaggacatagctgag
acctccatcaaagtcagctggtccagacctgtggctcccatcacaggctatcgtgtggtt
tacactccatctgtcgagggaagctctggcagcactgagctcaacttgcctgatacagcg
acctctgtgaccttaagcgatcttcgacctggccagctgtacaacatcagcatttatgca
gtggaggagaacctggagagcgagccagtgtttgtacaagtcaacactgctggagagcca
ctgccagaggaaatcccatctccaactgacctgcagttctttgaggtttctgactccaag
atcacaatcacctggactggtcctccaacagaagtgtcaggattcagagtgtctgtggct
caggtgggccatgatggactaacagaaagagagacacagcttcccatcacacacaatgct
tacgcagagattgcccaacttcagccaggaaccctctatcgcttctttatttttgccctt
aaaggagtagaggagagtgagcctctggttggagagcagaccaccaaacccgacaccccc
accaacttccgcttgaccaatgtgaccgaggacagtgctctgatcatctggtcagctccc
agagctcaagtcacaggttacaggctcttcctgaccgtggagggctcaaataccaaacag
atgcgtatcccaggacgcctgactcaatacaccctgctaaacctacagccagacacagcg
tacacagccacactgcactcagaacagggcaatgtgatcagtgagggagctgtggcaacc
tttaagacctctctgccaatggggactgctcctcgtttcagcactgatgttacagacact
tccatcatcatctcctggagtcctgtgccaagaattggatataggttgactgtaaggccc
agtcaaggtggagaggctcccagggaagtgacctctgaatcaggcagcatctatgtctca
ggcctgacccctggagtggagtacacttacagtgtccagcctgtcatcaacggccacggc
cacggaaaccccatcacacgccgcgttgtcacacctctctctcctcccactgatctcaac
ttggagactaacccaaacactggtgaactgacagtccagtggaacgatgccaaaacccca
gatatcacaggctacagagtgacttgcactcccaccaatggtcagcagggcaactctgtg
gaagagtttgtcaaggcaggccagacttcatgcactctggagaacctgagccctggagtg
gagtacaatgtcagtgtgttcacagtgaaggatgacatggagagtgtgcctgtgtcctcc
acaatcacaccggaacccgacacccccaccaacttccgcttgaccaatgtgaccgaggac
agtgctttgatcatctggtcagctcccagagctcaagtcacgggttacaggctcttcctg
accgtggagggctcaaataccaaacagatgcgtatcccaggacgcctgactcaatacacc
ctgctaaacctacagccagacacagcgtacacagccacactgcactcagaacagggcaat
gtgatcagtgggggagctgtggcaacctttaagacctctcggccaatggggaatgctcct
cgtttcagcactgatgttacagacacttccatcatcatctcctggagtcctgtgccaaga
attggatataggttgactgtaaggcccagtcaaggtggagaggctcccagggaagtgacc
tctgaatcaggcagcatctatgtctcaggcctgacccctggagtggagtacacttacagt
gtccagcctgtcatcaacggccacggccacggaaaccccatcacacgccgcgttgtcaca
cctctctctcctcccactgatctcaacttggagactaacccaaacactggtgaactgaca
gtccagtggaacgatgccaaaaccccagatatcacaggctacagagtgacttgcactccc
accaatggtcagcagggcaactctttggaagagtttgtcaaggcaggccagacttcatgc
actctggagaacctgagccctggagtggagtacaatgtcagtgtgttcacagtgaaggat
gacatggagagtgtgcctgtgtcctccacaatcacaccggacgtgccccagcttacagac
ctacactatgtcaatgtcactgactccacaattggtcttacctggagtccaatcaactcc
actgccatcacgggctaccgcatcacggttgtggctgctggtgagagcgtgcccatcttt
gaggattttgtggaggccaccacaggtttttacactgtgtatggccttgagcctggcatt
gactacgacatcagcatcatcaccgtcacagaaagtggacagagtgagcccaccaccatt
actcagcaaacagctgtgcctgctccgactggcttagcgtttactaacgtgagcaccgac
agttttactgtgacctggaaggcccccaacgtccctaagcctgctgacatcgatacatat
atcatccgctatcacccagtcgacgacgaggacgacattactgaacgcaatgtagaagga
aacaccaacagtgttgtacttcgacacctactgcccaacactgagtattttgtgagtgtt
ttctgtgtttatgaagaaagggaaagctcacctgtaatcagcactcagagaacagtactt
gattccccagtcgggctacgtttctctgagatcagcacaaactcattcaccgtgcactgg
atgccacctcaggccatcatttccggataccgtattcgctatcagatgaccagcggggga
cgctctaaggaggaaaggcttccaccttccagaagccacttaacactgactggccttgca
cctgagactgagtacatcatcaacatctatgccgtcagtggctcccacgagagcaagcca
ctcactggaacccagtccaccatctctgatgccccaactgatttggaggttacatcttca
actccagatagtattacaattcgctgggatgccccctctgttactgtgaggtactacagg
atcacacatggagagtcaggtggtcatggctcaccagtagagttcactgtgccaggctcc
cagactactgccaccattcagggtttgcgtccaggcactgactacacagtcactgtatat
gctgtgacaggcagaggagacagcccggcttccagcacacccatccacgtcaatcataaa
acagatattgagtccccatctgaaatggaggtgactgatgtgaaggacagcaccatcact
gtacgctggaccccagcagtgggccctgttagtggataccgcatcactggaacccctcgt
aatggccaggggcccaccttctctgaggtggtcgctccagatcaaacagaaattacattc
tcaggactgatgccaacagcagagtacactctgagcgtgtatgctttgggacaggatgga
gagagccctccacttgtagagactgtagttacaactgtggacaaacccaaagacttgacc
ttctctgatgtggactccacatccatgcttatctcctgggagagcccagacggtcaggtg
acctcgtacagagtgttgtactccagcccagaggagggcgagcgtgagctgttccctgcc
cctcacggcgaggatgagtctgctgtgctacgtggtctccgacctggtactgaatacact
gtgaacgtcatcgccctgcacgatcgcacccctagtcctgcactggtgggcacacagacc
acagctattcctggcccctctgatctccagttttctcagattggctccagttcattcact
gtgtcctggtattcagcagctaatgtccagctaactggctaccgtgtggccatcactccc
aagaacaagaatggtcctactaaagaggttcacattgcgccagactccactcagtatcat
gccactggacttatgcctgccactgactatgaagtagaggtttatgctgtgaagaattct
cttaccagccgcccagtcaagggagaggtcaccactcctgacaatatcagccctcctcgt
cgtgttcggatctctaacgtgaaggattcctcagtcactctcacatggcgctccaagacc
gaggccatttctggcttcctggtagaggccacacccaccatcggaggtgaaagtcccatc
cagcgcaccattccttcagactcccgcacctacacaatcacaggtctgcagccaggtact
aactacaaaatcaacatttacaccctcaatggaaacagccgcagcgagcccttcactctt
actgccactacagctaagccagtgatcagccccccgaccaacatccgtttcacttccctg
acccccaccaccatctccttctcctgggaacctcctcgcagcaccattacaggatactac
atcacctatgaggaggcgggcagcatcccacgagagcttctcccaagacccctcgctgtc
cggacctctgccaccatcactggtttgaaaccaggcactgagtacatcataagaatcgtt
gccctgaacaatgcacagagaagcactccactcctgggcaaagccagaactcaactggag
gacatctccccacagctcccagttccccaccgccccaaacaggacatcctggatgttcct
gaagatgagaacttaaacaccaattacgtacatgtggccggtccgaacagacaagacact
cttgggcagcagggacagcatatctacactgagtaccagagttttggcttgggtaaccgt
ggccagcagcagcctctggctccacatcaaggccagccactggtctacatccctcttcct
ggaccagatggccacagagtgcctgtagtaaaggtgagcgaaggtcctgcacctggcttc
tccttcgagttccctctcaatgagacagacctgccccaggaagcccagacacagaccacc
atcacatggcaaccagtggaacatagcgatgagtatgtggtgtcttgcagtcccattaca
gagatcaacgagaagaccttccagatgcatcttcctggcagctccaacagtgctacactg
attggccttacctctggagcttcctacaacattgttgtagagtcggtcaatggagaccac
aaacagaaagttctgcaagacgtagttactgtcgggaacacttttccaggaccatctgct
atccccataggcagggatgtgtgctatgacaccttcacagccacctaccacgaggtgggc
acagagtgggagcgcatgtccgagacaggatttaagctgtggtgcaggtgccttggccta
ggcagtggtcatttcagatgtgattcatccaaatggtgtcatgacaatggccataactac
cgtatcggagagaggtgggaccgccgtgctgagaatggtcacatgatgagctgcacctgc
ctgggcaacggaaagggagagttcaaatgcgagccacatgagtcaacttgttatgatgaa
ggaaagatgtaccaggttggaaaccagtggcagaaagagtatcttggagccatctgcacc
tgcacctgctatggtggacagcagggctggcgctgtgagaattgccgtcgtccgggggct
gaggtaaacgtggaccttattcagcctccaatccacacagatgtttacgaccgctacaga
gagaatgccctgcgcaaactgaacatccagtgtcccattgagtgcctcagaccagacctg
ctagcagatgctcaaagcccttcagagtag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (53)   
   KEGG ORTHOLOGY (1)   
   RefGene (48)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (7)   
   RefSeq(pep) (7)   
DNA sequence (7)   
   RefSeq(nuc) (7)   
Protein domain (8)   
   Pfam (8)   
All databases (85)   

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