KEGG   Astyanax mexicanus (Mexican tetra): 103031833
Entry
103031833         CDS       T05042                                 
Name
(RefSeq) protein Tob2
  KO
K14443  protein Tob/BTG
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:amex00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    103031833
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:amex03019]
    103031833
Messenger RNA biogenesis [BR:amex03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     103031833
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     103031833
SSDB
Motif
Pfam: BTG PAM2
Other DBs
NCBI-GeneID: 103031833
NCBI-ProteinID: XP_007229875
Ensembl: ENSAMXG00000026298
UniProt: A0A8B9KCJ6
Position
23:311158..324257
AA seq 409 aa
MHLEVKVALNFIVSYLYNKLPRRRADLFGEELERILVSRFEGHWYPEAPLRGSAFRCLHL
GAPRDPIVDLAARRSGLDTEEVRANVPPELSIWIDPYEVSYQIGEKGVVKVLYIEDPPGL
GVEGEASDSAVCPVSKVDLELDEGKSLGFNPDAQVFVPIGGHVSPVLLPSLSSSPTPLCQ
GLFSYPGPGTPSNPNTHSNASSPSPPTTALPYPHPAAPPNTRQAPQPITFTTASFAATKF
GSTKMKKCGGAGMVGGPGAIVGPPQQRMLSRSPTTISPPGLVKHKPISLSMHSLAGQVSS
QLSPNAKEFVYPATQGPIYFDTEAPNLSHATPFQAPPPPHPTHPTSFDPFSSPPPGQAIG
VIGGGIGSGIGGSGGSGISFLEKPPFVEGLGGYNLQYSSQAFQPVVLAN
NT seq 1230 nt   +upstreamnt  +downstreamnt
atgcatctggaggtaaaggttgcactgaacttcatagtgtcctacttgtacaacaaactc
ccccggcggcgggcggacctgttcggtgaggagctggagcgtattctggtgtcacgtttc
gaaggacactggtaccccgaggcacctctacgtggttctgccttccgctgtctccaccta
ggagcccccagggatcccatagtagatttagcagccagaaggagtggattggacactgaa
gaagttcgtgccaatgtacctccggagctcagcatctggattgacccttatgaggtgtcc
tatcagattggggagaagggcgtggtgaaggtgctgtacattgaggatcctccgggttta
ggcgtagaaggcgaagcatcagacagtgcggtctgccctgtcagtaaggtagatctggag
ctggatgaagggaaaagtttgggtttcaaccctgacgctcaggtgttcgtacccataggc
ggccatgtgtctccagtcctgctgccttctctttctagttcccccacgccgctctgtcag
ggtctgttcagttaccctggccccggcacgccaagcaatcccaacacgcactccaatgct
tcctccccgtctccgcccacaacggctttaccataccctcacccggcggcccccccaaac
acccgccaggctccccagcccatcacctttactacagccagctttgccgccaccaagttc
gggtccaccaagatgaagaagtgcgggggcgccggaatggtgggcggacctggtgccatc
gtgggccctccgcagcaaagaatgctgagccgctcccccaccaccatatctccaccgggg
ctggtgaagcacaagcccatctctctctccatgcactccctggctggacaggtttccagc
cagctttccccgaatgccaaagaatttgtctaccctgccacccaggggccgatctacttt
gacactgaagcaccgaacctgtcccacgccaccccctttcaggctcctccaccacctcac
ccaacacaccccacctcctttgacccattttccagccccccacctggccaagccattgga
gttatcggtggcggtattggcagcggtattggcggcagtggcggcagcggaatttccttc
ctggagaagccgccattcgtggagggcctgggcggatacaacctgcagtactccagccaa
gccttccagcctgtagtactggccaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (30)   

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