KEGG   Astyanax mexicanus (Mexican tetra): 103031870Help
Entry
103031870         CDS       T05042                                 

Definition
(RefSeq) autophagy-related protein 16-1-like
  KO
K17890  autophagy-related protein 16-1
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex04136  Autophagy - other
amex04140  Autophagy - animal
amex04621  NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:amex00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    103031870
   04136 Autophagy - other
    103031870
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    103031870
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:amex04131]
    103031870
   03029 Mitochondrial biogenesis [BR:amex03029]
    103031870
Membrane trafficking [BR:amex04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    103031870
 Others
  Rab GTPases of specific organelles
   Auto phagosome
    103031870
Mitochondrial biogenesis [BR:amex03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    103031870
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: ATG16 Fez1 Atg14 Takusan
Motif
Other DBs
NCBI-GeneID: 103031870
NCBI-ProteinID: XP_007236290
Position
20
AA seq 238 aa AA seqDB search
MIMEPWKSHVRAKLFQRDCLQREPFSGLFNKVSRLEDMLNLHVSLLEDLERKSSNQNGIK
KQVEEEAPPKLCLELREAQHDREELIQKVSDLTSVLYLKEAELQYCHSQVARFRSEAVLL
AKGASLLKDDLSEYQYKLECQSKELAALRLEHKNLKEDLAVTRQEREELLERWLEEKKEE
AERLNKHNATLERWNRFAGRLKKRHSGGCCRQKCAAATNCPRITQRHSADQPLPDISE
NT seq 717 nt NT seq  +upstreamnt  +downstreamnt
atgattatggagccgtggaaaagtcacgtgcgggccaagctgtttcagagggactgttta
cagagagagcccttctctggactctttaataaagtgtccaggttagaagacatgctaaat
ctgcacgtgagtttattggaggacttggaaagaaagagttcaaatcaaaatggaataaaa
aagcaggttgaagaagaagcccctccaaaactgtgtctggagttaagagaggcccagcat
gacagagaagagctgatacagaaagtctcagacctcaccagtgttctttacctcaaagaa
gcagagctgcagtactgtcactcacaagtcgcccgattccgcagcgaagccgttctgctg
gctaaaggagcgtccttactgaaggatgatctgtcggagtatcagtataaactggagtgt
cagtctaaggagttggcagcattgaggctggagcacaagaatctgaaggaggatctagcg
gttacgcgtcaggaaagggaggagctgcttgagcgctggttagaagagaagaaagaagag
gcggagcgtcttaataaacacaatgctactctagagagatggaatcgttttgctggtcga
ctgaaaaaacgtcacagtggaggatgttgtcgacagaagtgtgcagcagctacaaattgc
ccaagaatcacacagagacattcagctgatcagcctctgccagacataagtgaatga

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