KEGG   Astyanax mexicanus (Mexican tetra): 103032105
Entry
103032105         CDS       T05042                                 
Name
(RefSeq) arginine-glutamic acid dipeptide repeats protein-like isoform X1
  KO
K23310  PHD finger protein 6
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:amex00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    103032105
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:amex03000]
    103032105
   03009 Ribosome biogenesis [BR:amex03009]
    103032105
   03036 Chromosome and associated proteins [BR:amex03036]
    103032105
Transcription factors [BR:amex03000]
 Eukaryotic type
  Zinc finger
   Other zinc fingers
    103032105
Ribosome biogenesis [BR:amex03009]
 Eukaryotic type
  Other ribosome biogenesis factors
   103032105
Chromosome and associated proteins [BR:amex03036]
 Eukaryotic type
  Chromatin remodeling factors
   NuRD complex
    103032105
SSDB
Motif
Pfam: zf-HC5HC2H zf-HC5HC2H_2
Other DBs
NCBI-GeneID: 103032105
NCBI-ProteinID: XP_022536189
Ensembl: ENSAMXG00000011058
Position
19:25668305..25683958
AA seq 606 aa
MAEEDSDSSLQGVCCILCKTDDENRITGPLLSKEDISAHENCMVFSSGIYCKNSPSFDDL
CGFDVEDVKAECSRGKKLKCHYCRKSGATVGCEEKKCKRSYHYPCAIADRARCVEKKSRG
LYMLYCPKHDPKRPKNFDLANESDCSDAGSNTSKTPKLDNSHQEASSGQKVRGQRTGTPV
RKSSRTGLNKVNSGQPLSQSDSVSTPSRPRNKKRQFEIILSDSDTEVTPLNKKKPVRQLV
LHTEEAGPCDDNQMIAPLDDSDLEIIPEKQQRESTPIPEDQRNKTREEPISSPINNNDDN
DDTDIEEIQETYKEPAIAESQSMMESEFRHESVPLTIISDSGPFSVDSENSIGTTSPSFV
PGQAAPPPMSSSHGSLSAPEPAATVPTPTITTSVINPPQPDCPSVDSPPLEGASAAEPAD
VPNHAIPTAPSRGESDFKEEREQPACTASRNTLALNMSHDLPESHAPPIDQPLIRAASPG
CSTSSTQTAKGKEESLSGSGAALFWRRCNEMGCTKAIFSELTNQISSLAGRVQSQHATQQ
DYAVSLRILKASGKLPALFQQLDQDFEEQERELKRKREALKEARDLLKNHPIDVKNYTLK
NQKQDD
NT seq 1821 nt   +upstreamnt  +downstreamnt
atggctgaggaggactcggacagctctctccagggtgtgtgctgtattctctgtaaaact
gatgatgagaatagaattacaggacctctgctgtctaaagaggacatctcagcacatgag
aattgtatggtcttttcatcaggaatctactgcaagaactctccgtcctttgatgacttg
tgtggctttgatgtggaagatgtgaaagctgaatgcagtcgtggaaagaaattaaaatgc
cactactgtaggaagagtggagctactgtggggtgtgaggaaaaaaagtgtaagcgctct
taccattacccgtgtgccatagcggaccgtgcaagatgtgtggagaaaaagtctagaggc
ctttatatgctctactgtccaaaacatgacccaaagcgtcctaaaaattttgatttggca
aatgaatcagattgttctgatgctggctctaacacatcaaagacaccaaaactagacaac
agtcatcaagaagcatcatcagggcagaaggtcaggggtcagaggacaggcaccccagta
agaaagagcagtagaacagggttgaacaaagtaaacagcgggcagccattatctcagagc
gattcagttagtacgccttcaaggccccgaaacaagaagaggcagttcgaaattatttta
tctgattcggatacagaagtcacgcccttgaacaaaaaaaagccagtccgccagctggtt
ctgcacacagaggaggcaggtccttgtgatgataaccagatgattgcaccactagatgat
tcagatttggaaatcataccagaaaaacagcaaagggaatcaactccaatccctgaagat
caaagaaacaagacaagggaggagcccatctcctctcccataaataataatgatgataat
gatgatacagacattgaagaaattcaagaaacttacaaagagccggccatagcagaatcc
cagagtatgatggagtcagagttccggcatgagagtgtaccactcaccatcatttctgac
tcaggaccattttctgttgattcagaaaacagcattggcaccacttcaccctcttttgtg
ccgggacaggccgctcctcctcctatgagtagctctcatggatctctctcagcccctgaa
ccagcagctaccgtccccacgcccaccatcaccacctcagtaataaacccccctcagcct
gactgcccctctgttgactccccgccactggagggagccagtgctgcagagcctgctgac
gtacccaaccacgctattcctacagcgccctctcgtggagagtcagatttcaaggaggaa
cgtgaacaacctgcctgtacagcatccaggaacacactcgcattaaacatgtcacatgac
ctgccagaaagccatgccccacccatagatcagccactaatccgtgctgcatcaccaggg
tgctcgacatcatccactcaaaccgctaaaggcaaggaggaaagcctaagtggatctggt
gctgccctcttctggaggaggtgtaatgagatgggctgtacaaaggccatattctcagag
ctcaccaatcaaatcagcagcctggcagggcgggtgcagtcccagcatgccacacagcag
gattatgctgtatctcttcgaatcctgaaagcatcagggaagctcccagcattattccaa
caactagaccaagattttgaggaacaagagagggagctgaagaggaagagagaggcactg
aaggaagccagagacctgctgaagaatcatccaattgatgttaaaaattatacgttgaaa
aatcaaaaacaagatgattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   RefGene (32)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (9)   
   RefSeq(pep) (9)   
DNA sequence (9)   
   RefSeq(nuc) (9)   
Protein domain (2)   
   Pfam (2)   
All databases (63)   

Download RDF
DBGET integrated database retrieval system