KEGG   Astyanax mexicanus (Mexican tetra): 103033140
Entry
103033140         CDS       T05042                                 
Symbol
srp72
Name
(RefSeq) signal recognition particle subunit SRP72
  KO
K03108  signal recognition particle subunit SRP72
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex03060  Protein export
Brite
KEGG Orthology (KO) [BR:amex00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    103033140 (srp72)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:amex02044]
    103033140 (srp72)
Secretion system [BR:amex02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   103033140 (srp72)
SSDB
Motif
Pfam: TPR_19 SRP72 TPR_14 SRP_TPR_like ANAPC3 TPR_12 TPR_2 TPR_6 TPR_1 TPR_11 BTAD TPR_MalT HrpB1_HrpK RWD
Other DBs
NCBI-GeneID: 103033140
NCBI-ProteinID: XP_007260391
Ensembl: ENSAMXG00000004011
UniProt: A0A8B9R2H9 W5K934
Position
2:32784186..32794356
AA seq 665 aa
MAGGAGSLAALWTEVNRCGQSGDFSRALKAVNKILHENKEDVTALHCKVVCLIQNGGFKE
ALNVMNTHTKSLSSDLIGFEKAYCEYRLNRVENALKTIEGISEQTDKLKELYGQVLYRLE
RYDECEAVYKDLIRNSQDEYEEERKTNLAAVQAAQSTWENTTPEDLGLPESTYELCYNSA
CSLIGRGQLSAAMKKLQEAEELCRMSLAEDTDVTEEDIDAELAVIHSQMAYIMQLQGRTE
DALQLYNQVIKLKPSDVGLLAVTANNIITINKDQNVFDSKKKVKLMNAEGVEYKLAKKQL
QAIEFNKALLAMYTNQADQCRKLSSALQSQNPGHPRPVLIKVAQLCREKQHNKAIELLQR
FSEEYPESASGIKLTMAQLYLTQGHVTKACDILRSIEDFKHKQGMVSALVTMYTHEEDID
SAIDVFSQSIQYYQSEQPGSPAHLSLVREAADFKLRYGRKKEAISDLEQLWKQNTKDVHT
LAQLISAYSLVDQDKAKALSKHLPSPDTMSFNIDVDELENSHGATYVRKKAGKVVGETVP
KEQGQEDVKKKKKKKKGKLPKNYDPKSTPDPERWLPMRERSYYRGRKKGKKKEQVGRGTQ
GATSGATAELDASKTASSPPTSPRPGSGTGSASNVVPPRQQKPAASGATRKKAPPKKKKS
GKSGW
NT seq 1998 nt   +upstreamnt  +downstreamnt
atggcgggcggtgcgggctcgttagcggcgctgtggaccgaagtgaaccgttgtggacaa
agcggggacttctccagagccctgaaggccgtgaacaaaattcttcatgagaataaggaa
gatgtgacggcgctgcactgcaaagtcgtttgccttattcagaacggtggatttaaggag
gcgctgaatgttatgaacacacacaccaagtcactctcaagtgatttgatcggttttgag
aaggcctactgtgagtaccggctcaacagagtggagaacgcgctgaagaccatcgaggga
atctccgaacagacggacaaactcaaagaactctacggtcaagtgctgtacaggctggag
cgttatgacgagtgtgaagctgtgtataaagatctgatcagaaactcacaggacgagtat
gaggaggagaggaagaccaacctggctgcagtgcaggctgcacagagcacctgggagaac
actacacctgaggacctcggcctgcccgagagcacgtatgagctctgctacaactccgcc
tgcagcctgattggccgaggccagctcagcgcggccatgaagaagctccaggaagctgaa
gagctctgtaggatgtctctggcagaagacactgacgtgacggaggaggatatcgatgct
gaactggcagtgattcactctcagatggcttatatcatgcagctacagggcagaactgag
gacgcgctgcagctttacaatcaagtcatcaaactgaagccgtctgatgtgggtctgttg
gccgtaacagctaataacatcatcaccatcaacaaggaccagaacgtgttcgactcgaag
aagaaggtgaagctgatgaacgctgagggggtggagtacaaactggccaagaaacagctg
caggccatcgagttcaacaaagcgctgctggccatgtatactaaccaggcggatcagtgt
aggaagttgtcgtcggctctgcagtcgcagaaccccggccacccgcgacccgtcctcatc
aaagtggcccagctctgccgagagaagcagcacaacaaagctatagagctgctgcagcgt
ttctcagaagagtatccagaaagtgcatctggaatcaaactgacaatggcacaactttat
ctgactcaaggtcatgtgactaaagcctgtgacattctgaggtcgatagaagactttaag
cacaagcaggggatggtttctgccttggtgacgatgtacacacacgaggaggatattgat
agtgctattgatgtgttcagccaatcgatccagtattaccagtctgaacagcctggttct
ccggcccacctgtctctggttcgggaggctgcagactttaagcttcgctacgggaggaag
aaggaggccatcagtgacctggagcagctgtggaagcagaacactaaagacgttcacaca
ctcgctcagctcatctctgcttactcgctcgtcgaccaggacaaggccaaggcgctgagt
aagcacctcccctcgcccgacaccatgtccttcaatatagacgtagatgagctggagaac
tcgcacggcgccacctacgtcaggaagaaggctggcaaagtggtgggagagactgtgcct
aaggagcagggccaagaggacgttaaaaagaagaagaaaaagaagaagggtaaactaccc
aagaactacgaccccaaatcgacccccgaccccgagcgctggctgcccatgcgggagcga
tcgtactaccggggcagaaagaagggcaagaagaaggagcaggtgggccgaggaacccag
ggagcgacctcaggagccaccgcagagctagacgccagcaagacggccagcagccccccc
acctccccgcggccgggctccggcacaggctccgcctccaacgtggtcccacccaggcaa
cagaagccggcagcttccggggctacgcgcaaaaaagccccgcccaagaagaagaagagc
gggaaaagtggatggtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (14)   
   Pfam (14)   
All databases (39)   

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