KEGG   Astyanax mexicanus (Mexican tetra): 103033852
Entry
103033852         CDS       T05042                                 
Symbol
ino80
Name
(RefSeq) DNA helicase INO80
  KO
K11665  chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:amex00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    103033852 (ino80)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:amex03036]
    103033852 (ino80)
Chromosome and associated proteins [BR:amex03036]
 Eukaryotic type
  Chromatin remodeling factors
   INO80 complex
    103033852 (ino80)
   INO80 complex (yeast)
    103033852 (ino80)
SSDB
Motif
Pfam: SNF2-rel_dom DBINO Helicase_C HDA2-3 ResIII
Other DBs
NCBI-GeneID: 103033852
NCBI-ProteinID: XP_022519056
Ensembl: ENSAMXG00000017200
Position
3:56767269..56819436
AA seq 1559 aa
MASEQDGVVSACSKLAKPLHLQYLERSLRLDTFLRQTSAIFNQDISSDDSDDGLGEGPSL
APSNPHAPLLAVKNEPLDSEDGTKGSGAAGGAECGTLNGVLLQEHKADKSSLYNFSKLRK
SRKWLKGILLSDDTTDSDTDSDDSDFSMTREELHDMLRLHKFTRLHQSKFQTDRELQQYQ
YYSTGLLSSQDPFYEQQRHLLGPKKKKIKEEKKFKAKLKKMKKKKKRSEDLSMEGRPYVT
KVFAKFSHDAPPPMTKKKHLTVEQLNARRRKVWLTIAKKENPKAFKQKASAKNFVLTNAK
KLAHQCMREVRRAAIQAQKNCKETLPRARRLTKEMLLYWKKYEKVEKEHRKRAEKEALEQ
RKLDEEMREAKRQQRKLNFLITQTELYAHFMGGKQNAAGGDSTQEEILRKLDENTAHRQI
DIGGGVMVNVGHEDYDSEYYKSQALRNAKEAYHIHQATTRQFDEEAKDSRCASLHVASVS
GSGFGESYSLSNPSIQAGEDIPQPTIFNGKLKGYQLKGMNWLANLYEQGINGILADEMGL
GKTVQSIALLAHLAERDNIWGPFLIISPASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKV
IRKFWSQKTLYTQNAPFHVVITSYQLVVQDVKYFQRVKWQYMVLDEAQALKSSTSVRWKI
LLQFQCRNRLLLTGTPIQNTMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAI
DENQLSRLHMILKPFMLRRIKKDVENELSDKIEILTYCQLTSRQRLLYQALKNKISIEDL
LQSSMGTAQQAHSTTSSLMNLVMQFRKVCNHPDLFERQETRSPFHMSLKPFIMSKFLFRE
GLLNTCSQARTRLLQVLFSPFSPQHIQQSLFHRQSDDEGSCFSFLRFIDVSPSEMSNVML
QGTLTRWLALYLSFKSAHRLHHQRLWSGGEMEGGQGTAERSSGAHCLSNRDLVLWLDRPT
SFPNRHTSTVLQDLVFVAQHPWPFAHADVIVHSRRSSSTPSLRPCQPTQLPKFLLTATPK
VTAIPTERYCPDRSAEYEWRQVRDGGSLAAKQCFLYGSPELAYAWAARSHSFHPHSPGGM
MALQPRHGWSFIRIPDKESLITDSGKLHTLDLLLTRLKSQGHRVLIYSQMTRMIDLLEEY
MVYRKHTYMRLDGSSKISERRDMVADFQSRTDIFVFLLSTRAGGLGINLTAADTVIFYDS
DWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGSIEERILQRAKEKSEIQRMVISGGNFKP
DTLKPKEVVSLLLDDEELEKKLRLRQEEKRQQEESSKVKDRKRKREKYAEKRKKEDDLEG
KKKKEGVNLVIPYAPSADNSNLSADGEDSFISVDMDSAMPSPFSEISLSSELQPGSLPAD
ESSSDMLVIVDEPVSSAPQSRATNSPASGTGSVSDNLNGVSSQDTSSPGRGRSGRSRGRP
KGSGGAGKCSGRKGRGRKSTAGSAAAMAGAMAGAAAASAAAYAAYGYSVSKGIPASSQLQ
PALARSSATPAFVPVGTSSPQAKASAMGPGSQMQAHGSSHIHHNPSKRGKGPSSGHGGR
NT seq 4680 nt   +upstreamnt  +downstreamnt
atggcctcagagcaggatggcgtggtctctgcctgctcaaagctggccaaaccgctccac
ctgcagtacctggagcgctcccttaggttggacaccttcctccgccagacctctgccata
tttaatcaagacatatccagtgatgacagtgatgatggtttgggtgaggggccttctctg
gccccctccaaccctcatgcccccttgctagcagtgaagaatgagcctcttgactctgag
gatggaacgaaggggtctggggcagcaggaggggcagagtgtggtactctcaatggagtc
ctgcttcaggagcacaaggctgacaaatcctctctgtacaacttctccaagctgaggaag
agccggaagtggctgaagggtattttgttaagtgacgacactacagattcggacactgac
tcagacgactcagatttctcgatgacccgggaggagctacacgacatgctgcgattgcac
aagtttaccaggctacaccagagcaagtttcagactgaccgggagctgcagcagtatcag
tactacagcacaggccttctgtcctcccaagaccctttctatgagcaacagcgccaccta
ctgggacccaagaaaaagaagattaaggaggagaagaaatttaaggcaaagttaaagaag
atgaaaaagaaaaagaaacggagtgaagatctctccatggagggaaggccatatgtcacc
aaagtatttgccaagttctcccatgatgctccgccccccatgacaaagaaaaagcactta
acggtcgagcagttgaatgctcgtaggcgaaaagtctggcttaccattgctaagaaagaa
aacccgaaggcttttaaacagaaagcatctgcaaagaactttgttttaaccaatgccaaa
aagctggctcatcaatgcatgcgtgaggtgcgcagggctgcgatccaggctcagaagaac
tgcaaggaaacactgccgcgtgcacgtcgcctcactaaagaaatgttgctctactggaag
aagtacgagaaggtggagaaagagcaccgcaagcgtgcagagaaagaagcgctagaacag
cgcaaactagacgaggagatgagagaggccaagagacagcagaggaagctgaacttcctc
atcacacagaccgagctgtatgcccactttatgggaggcaagcagaatgctgcaggagga
gacagcactcaggaggagattctccggaagctggatgagaacacagcgcaccgtcagata
gacatcggtggtggagtgatggtcaatgtgggtcatgaggattatgacagtgaatactac
aaatctcaagccctacggaatgccaaagaagcctatcatattcaccaagctacgacaagg
cagtttgacgaggaggcgaaggacagccgctgtgcctctctgcatgtggccagtgtgtca
ggctctggttttggggagagctacagcctgtccaacccttccatccaggctggcgaggac
atccctcagccaaccattttcaacggcaagctcaagggctaccagctgaaaggcatgaac
tggctggccaacctttacgaacagggcatcaatggcatcctggcggatgaaatggggctg
ggcaaaacggtccagagcatcgcccttctcgcccacctggcagagagagacaacatttgg
ggacccttcttgatcatctccccagcctccacactcaacaactggcaccaagagttcacc
cgctttgtgcctaaattcaaggtgctgccatactgggggaacccccatgaccgcaaagtg
attcgaaagttttggagccaaaaaaccctgtacacccagaatgctcccttccatgttgta
atcaccagttatcagctggtggtgcaggacgtgaagtacttccagcgagtgaagtggcag
tacatggttttggatgaggctcaggcgctgaagagcagcaccagtgtgcggtggaagatc
cttcttcagttccagtgccggaaccggctgctactaacaggaacacccatccagaatacg
atggccgagttgtgggccttgctgcacttcatcatgcctactctgtttgactctcatgag
gagtttaacgagtggttctccaaagacatagaaagccatgctgagaacaaatctgccatt
gatgaaaatcagctctcaagattgcacatgattttgaagcctttcatgcttcgccggata
aagaaggatgtggagaacgagctctcagataagattgagatcttgacatattgccagctg
acgagcaggcagaggctactgtaccaggccctgaagaacaagatctccattgaggacctg
ctgcagtcgtctatgggcacagcccagcaagcccacagcaccaccagcagcctcatgaac
cttgtcatgcagttcagaaaggtgtgtaaccatccagacctgtttgaacgtcaggagacg
cgctcaccttttcacatgtcattgaagcccttcatcatgtccaagtttctcttccgtgag
ggtcttcttaatacatgcagccaggcgaggacaaggttgttacaggtcctgttctctcct
ttctctcctcaacacatccagcagtccttatttcacaggcaaagtgatgatgaaggcagc
tgcttttcttttctccggttcattgacgtgtcaccatcggagatgtccaatgtcatgctg
cagggcacactgaccagatggctagcactttatctctcctttaagtctgcccaccggctc
catcatcagcggctgtggagtggtggagagatggagggaggtcagggtactgccgagagg
agctctggagctcattgcctttctaacagagacctcgtcctgtggctagacaggccaacg
tcattccccaacaggcacaccagcaccgtcctgcaggacctggtcttcgtggctcagcat
ccgtggccctttgcccacgcagacgtaattgtccacagtagacgttcttcctccactccc
tccctcagaccctgccaacccacccagctgcccaagttcttgctcacagcaacaccaaag
gtgacagcaattcctacagagcgatactgtccagatcggagcgctgagtatgagtggcgg
caagtccgggacggtgggagtttggctgctaagcagtgcttcctgtatggctcgccagag
ctggcttacgcctgggctgcccgctcccactctttccaccctcacagccctgggggcatg
atggccctccagcccagacatggctggtccttcatcaggataccagacaaagaaagcctg
atcacggacagcggaaagcttcacactctggacctgctgctgactcgactgaagtctcag
ggccatcgtgtcctcatttactctcagatgacccgcatgattgacctgctggaggagtac
atggtgtacaggaagcatacctacatgcgactggacggttcatccaagatctcggagcga
cgagacatggtggcagacttccagagccggacagatatatttgtcttcctcctcagtacg
agagctgggggcctcggcattaacctgactgctgcagacacggtaattttctatgacagt
gactggaaccctacagtagatcagcaggctatggacagagctcacaggctgggacagacc
aagcaggtcactgtttaccgcctcatctgtaagggcagtatagaggagcgcatcttacag
agggccaaggagaagagtgagattcagaggatggtgatctcgggtggaaatttcaaaccc
gatacccttaagcctaaagaggtggtcagcctgctgctggatgatgaggagctggagaaa
aagctgcgcttaaggcaggaagagaagagacagcaggaagagagcagcaaggtgaaggac
cgcaagaggaagagggagaaatatgcagagaagaggaaaaaggaggatgacttggagggg
aagaagaagaaagaaggtgtgaacttggtcattccatatgcaccctcagcagacaactcc
aacctctcagcagatggagaggactccttcatcagtgtggacatggactctgccatgccc
agcccttttagtgagatttctctgagcagtgagctgcagcctggctcgctgccagctgat
gagagcagcagtgacatgctggtgattgtggacgagcccgtgtcttctgccccacagtcc
cgtgcgaccaactcccctgcctccggcaccggctctgtatctgacaacctgaacggtgtc
tcttctcaagacacgtctagtccgggcagaggaaggtccggtaggagccgaggtcgtccc
aaaggctctggaggggctgggaagtgctccggcaggaagggtcgaggaaggaagtcgaca
gcaggcagcgcagcagccatggccggggcaatggcaggagcagcagctgcctctgctgcc
gcatacgctgcttacggttacagtgtttccaaaggtattcctgcttccagccaattgcag
cctgcgctggctcgctcttcagccacgcctgctttcgtccccgtgggcacctcctccccg
caggctaaggccagcgctatgggccctggatctcagatgcaagcacacggcagctcccac
attcatcacaacccttccaagagaggcaaaggacccagcagcggtcatggtgggcggtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (42)   
   KEGG ORTHOLOGY (1)   
   RefGene (37)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (5)   
   Pfam (5)   
All databases (57)   

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