KEGG   Astyanax mexicanus (Mexican tetra): 103034394
Entry
103034394         CDS       T05042                                 
Symbol
lamb3
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit beta-3
  KO
K06244  laminin, beta 3
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex04510  Focal adhesion
amex04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:amex00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    103034394 (lamb3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    103034394 (lamb3)
SSDB
Motif
Pfam: Laminin_EGF Laminin_N NBP1 EGF_2 EAD9 F5_F8_type_C TPR_MLP1_2 DUF3450 ISG65-75 Prominin DUF2203 Syntaxin-6_N
Other DBs
NCBI-GeneID: 103034394
NCBI-ProteinID: XP_022538204
Ensembl: ENSAMXG00000004625
Position
22:17241432..17265823
AA seq 1109 aa
MRMKCCPCDSQNPAGPNAHTIQNVLSSAGTGRWWQSKKDMNPVTVQVDLQQLFQVNNVML
SFKGPRPDALVIERTKDFGRTWQPALYMAANCASAFPRVSTATPNNLGHTYCYTLPPTSN
NPYQDQLINYIPLHQYSNINYPPEYKIQEVSGFTGLRVNLTRLGEVVRLPGRSPSRYYAL
KEMRVTGSCFCYGHANRCLPDPTSNYLPTVQVNGVCDCQHNTAGVNCERCADFYNDLPWR
AAQQDNPHTCKRCECNNHSQKCHFDAELYELSGRSSGGVCDGCLHNTAGPHCERCAPNYY
RNPNSDIRQANACLPCQCNSAGSVSGGQCNPATGVCVCKANVEGPRCDRCKPGYYGLNPS
NPLGCSKCSCSASGSLSSVCDAVTGQCVCRPNMQGVSCDRCAAGFWNSPTGCQPCNCDPN
HSLSSTCDQETGQCVCRSGFMGRTCGGCPDNTYGDPLTGCRPCRCDSTGSAPGGCDKRTG
ACICKPGVGGARCDSCARGYCSSFPQCPVCPSCFFSLDLQLQNLTLDLDRLAARLDTQPG
TGTGTGTGTTGPGLPGDAEDRIRNMEDTLQQIKSFLNLPLPSEPLLTRDLNTLRTLQLTV
TRLNNRLYSADPTPDLQGELDKLQALLFNIRFLFDTKRNATTSSGNDYTGSMRLINFARE
RSVAAEKQANATGNTINNSATIRGDALKDLDNIQPGNTDNLQKLKDNLATRPNLTPTAVQ
VCGSTRLTPCTPQECNGELCPPAGAPPCGQSEPCTGALPQANRAVKNTDEVKTKLQQLNK
NITQAYEQIQETQNSADRVRLSAEELANRIKVTRDDLDYDLKDIKDFIKKLKDFLSDPSS
DPAEVQRVCEAVLGVKLPEGAESLRKKLQEMQDLAATLPDSTRVLKEAEPKLEQARRLLQ
DAERTRNESVLLQNGADQLISDLNKSEDDLEKLQNNLEQSQDIVNKVKDDIQKVDQSLAP
VDQLLTDVGLLLQPMRPLLEELKGDVKKAREETGEAEKQAGGAELEAELAATELEELQEQ
LKKLKQNANASTDANEAQQRLLDLHQDGIELIQETRDMMQKIMDKERSLQEGKEELQISS
ERLAGLDVYLQELINEIHSRATKLNMCQF
NT seq 3330 nt   +upstreamnt  +downstreamnt
atgaggatgaagtgctgcccgtgtgactctcagaacccggccggtccaaacgcccacacc
atacagaacgtgctctccagcgccggaaccggcaggtggtggcagtccaagaaagatatg
aatccagtcactgtccaggtggacctgcagcagctgtttcaggtgaacaatgtgatgctt
tcatttaagggtcctcggccggatgcgctggtgatcgagcggacgaaggatttcggccgg
acatggcaacccgcactgtacatggcagccaactgcgcctccgctttccccagggtttcc
acggcaacaccgaacaacctgggccacacctactgctacaccctcccccccacctccaac
aacccctaccaggaccagctgattaattacatccccctccatcaatactccaacatcaac
tacccacctgagtacaaaatacaggaggtcagtggttttacgggtctgcgtgtgaatctc
acgcggctgggtgaggtcgtccgtctgcccggccgcagcccgagccgatactacgccctg
aaagagatgagagtcacaggatcctgcttctgctacggccacgccaaccgctgcctacct
gaccccacctccaactacctgcccactgtacaggtgaatggagtgtgtgattgtcaacat
aacactgcaggtgtgaattgtgaacgttgtgctgacttttacaatgacctgccctggaga
gccgcccagcaagacaacccacacacctgcaaacgctgtgagtgtaataaccactctcag
aagtgtcactttgatgctgagctgtatgagctgagtgggcggagcagtgggggggtgtgt
gacgggtgtttacacaacactgcaggaccacactgtgaacgctgcgccccaaactactac
aggaaccccaacagtgacatacgacaagctaacgcctgcctaccatgccagtgtaacagt
gcaggatcagtgagtggtggtcagtgtaaccccgctacaggagtgtgtgtgtgtaaggct
aatgtggagggtccgcgctgtgaccgctgtaaacctggatattacggactgaacccctct
aacccactcggctgctccaagtgctcctgcagtgcgtccggttctctgagcagtgtgtgt
gacgctgtgacgggtcagtgtgtgtgtcggccgaacatgcagggtgtatcatgtgaccgc
tgtgctgccggattctggaactcaccaaccggctgccagccctgcaactgtgaccccaac
cactccctcagctccacctgcgaccaggaaacgggtcagtgtgtgtgtcggtccgggttt
atgggccgaacctgtggcggctgtccggacaacacctacggagatcctctgaccggctgc
agaccgtgcaggtgtgacagtacaggctccgcccccggtgggtgtgataagcgtacaggt
gcttgtatctgtaagccaggtgttggaggtgcccgctgtgactcgtgtgcccgtgggtac
tgttccagtttccctcagtgcccggtctgcccgtcctgcttcttctcgctggacctgcag
ctgcagaacctgacgctggatctggatcggctggccgcccggctggacacccagcccggc
acaggaaccggcacaggaaccggcaccaccggcccaggtttacctggagacgctgaggac
agaatcagaaacatggaggacactctgcagcagatcaagagcttcctcaacctcccactg
ccctcagaacccctactgaccagagacctgaatacactgcgcacactacaactcacagtt
accaggttaaacaacaggctgtactctgctgatcccactcctgacctgcagggggagctg
gacaaactgcaggctctgctgttcaacatccgcttcctcttcgacaccaagagaaacgcc
accacctccagcggcaacgactatacaggttccatgcgtttgattaactttgctcgtgag
cgctctgtggcggcggagaagcaggcgaacgctacaggaaacaccattaacaattcagcc
accatcagaggagacgcccttaaagacctagacaatatccaacctggcaacaccgacaac
ctgcagaaacttaaggacaatctggcaacccggcccaatctcacacctacagctgtacag
gtgtgtggcagtacccgtctgaccccctgcacccctcaggagtgtaatggtgagctgtgc
ccaccagctggagcgcccccttgtggtcagagtgagccgtgcaccggggctttacctcag
gccaacagagcggtgaagaacactgacgaggtcaaaaccaaactacagcaactcaacaag
aacatcacacaggcctacgaacagattcaggaaacccagaactcagctgatcgcgtcagg
ctgtctgcagaggagctggccaatcggatcaaagtaactagggacgaccttgactacgac
ctgaaagacatcaaagactttattaagaagctgaaggacttcctgtcagacccctcctcg
gaccccgcggaggtgcagcgtgtgtgtgaggcggtgttgggggtgaagctgccggagggg
gcggagtctctgaggaagaagctgcaggagatgcaggacctagcggcgactctgccggac
agcaccagggtcctgaaggaggcggagccaaaactggagcaggcacggcgcctcctacag
gacgctgagagaaccaggaacgagtcagtgctgctgcaaaacggtgctgatcagctgatt
tctgatctaaataaatctgaagatgaccttgagaagcttcagaataaccttgagcagagt
caggacattgtgaacaaagtgaaggacgacatccagaaggtggatcagtcattggctcct
gtagaccagctgctgacagatgtggggttgttactacagccgatgcgccccctgctggag
gagctgaaaggtgatgttaagaaggcgagagaggaaacaggagaggcggagaaacaggca
ggaggagcagaactggaggctgaacttgcagctacggagctggaagagcttcaggagcaa
cttaagaagttaaagcagaatgctaacgctagcacagatgctaacgaagcccaacaacgg
ctactggatctgcaccaggatggcatagaactcatccaggaaaccagagacatgatgcag
aaaatcatggataaagagcgctccctgcaggaggggaaggaggagctgcagatatcttca
gagcgtctggctggtctggacgtgtatctgcaggagctgatcaatgaaatccacagcaga
gccacaaaactcaacatgtgtcagttctaa

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (105)   
   KEGG ORTHOLOGY (1)   
   RefGene (100)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (123)   

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