KEGG   Astyanax mexicanus (Mexican tetra): 103034929
Entry
103034929         CDS       T05042                                 
Symbol
rnps1
Name
(RefSeq) RNA-binding protein with serine-rich domain 1 isoform X1
  KO
K14325  RNA-binding protein with serine-rich domain 1
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex03013  Nucleocytoplasmic transport
amex03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:amex00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    103034929 (rnps1)
   03015 mRNA surveillance pathway
    103034929 (rnps1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:amex03019]
    103034929 (rnps1)
Messenger RNA biogenesis [BR:amex03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     103034929 (rnps1)
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_occluded RRM_7 RRM_5
Other DBs
NCBI-GeneID: 103034929
NCBI-ProteinID: XP_022520837
Position
Unknown
AA seq 289 aa
MAPSPTKRRERSEDKGRERGKEKAAAKEGAEKEKEKERGRDKNRKRRSNSTGSSSSRSRS
SSSSSSSSGSSSGSSSGSSSSSGSSRSGSSSSSRSSSSSGSSGSPSPSRRRHDNRRRSRS
KSKSQKRGEEKERKRRSPSPKPTKLCLGRLTRNVTKDHIQEIFSTYGKIKIIDMPQDRLH
PNLSRGHAYIEFETPEEAQKALKHMDGGQIDGQEITATAVLTPRIRPAPRRMTPPRRMPP
PPPMWRRTPPRMRRRSRSPRRRSPVRRRSRSRSPGRRRHRSRSSSNSSR
NT seq 870 nt   +upstreamnt  +downstreamnt
atggccccatcacctaccaaacgcagggaacgttcagaagataaaggcagagaaaggggc
aaagaaaaggctgcagcgaaggaaggtgctgagaaggagaaggagaaggagaggggcagg
gacaagaaccgcaaacgccgcagtaactctactgggagcagcagcagcaggtctagatcc
agctccagctccagcagcagctctggatccagctctggttcatccagtggttccagctcc
tcctctggctctagccgctctggatcctccagctcttctcgctcctccagttcctctggt
tcctcggggtcgccgagccccagtcgccgccgacacgacaaccgcagacgctcacggtca
aagtccaaatcgcagaaaaggggagaggagaaggaaaggaagaggagaagtccgagtccg
aaacctaccaaactttgcctgggaagactgaccaggaatgtcacgaaggatcacatccaa
gagattttctccacctacgggaagatcaaaattattgatatgccacaagaccggttacat
ccaaacttgtccaggggccacgcctatatcgagtttgagaccccagaggaggcccagaag
gctctgaagcacatggatggaggtcagatcgatggtcaggagataacagctacagctgtc
ctgacccccaggatacgccctgctccccgcaggatgactcctccacgcaggatgccgcct
ccacccccgatgtggcgtcgaactccaccacgcatgaggagaaggtctcgttcgcctcgt
cgtcgctctccagtgagaagacgctctcgctccagatctccgggccgccgacgccatcgc
tcacgctccagctccaactcctcacgatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (43)   
   KEGG ORTHOLOGY (1)   
   RefGene (39)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (57)   

Download RDF
DBGET integrated database retrieval system