KEGG   Astyanax mexicanus (Mexican tetra): 103036425
Entry
103036425         CDS       T05042                                 
Name
(RefSeq) paired box protein Pax-6 isoform X1
  KO
K08031  paired box protein 6
Organism
amex  Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:amex00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:amex03000]
    103036425
Transcription factors [BR:amex03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain Paired-related
    103036425
SSDB
Motif
Pfam: PAX Homeodomain HTH_23 Homeobox_KN HTH_Tnp_IS1 HTH_28
Other DBs
NCBI-GeneID: 103036425
NCBI-ProteinID: XP_007239847
Ensembl: ENSAMXG00000001228
Position
5:618157..637895
AA seq 436 aa
MPQKEFHNQTSWETGVASIMQNSHSGVNQLGGVFVNGRPLPDTTRQKIVELAHSGARPCD
ISRILQVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVGKIAQYKHECPSIFAWE
IRDRLLSEGICSNDNIPSVSSINRVLRNLASEKQQVGVDGVYDKLRMLNGQIGTWGARPG
WYPGTAAPGHPNQDGCQQQENSSENTNSISSNGEDLDETQIRLQLKRKLQRNRTSFTQEQ
IEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQVSSN
SSHVPVSSNFSTSIYQHIPQPSTPVTFTSGSMLARSDGALTNSYSGLPPMPTFTMANNLP
MQPSQASYSCMLPTSTPVNGRSYDTFPSPHMQAHMNSQSMSTSGTTSTGLISPGVSVPVQ
IPGAESDISQFWSRLQ
NT seq 1311 nt   +upstreamnt  +downstreamnt
atgccgcaaaaggagttccataatcagacctcatgggaaaccggagtggcctctataatg
caaaacagtcacagtggggtaaatcagctgggtggtgtgtttgtaaacggtcggccgctg
ccggacacgacaaggcagaagattgtagagcttgctcacagtggagctcgaccctgcgac
atctcccgcatactgcaggtgtcgaacggctgtgtgagtaaaatcctgggcaggtattat
gaaaccggttctattcgtccgcgagcgattgggggcagtaaaccgcgggtagcgactcct
gaagtggtcggtaaaatcgcccagtataaacacgagtgtccgtccatcttcgcctgggag
atcagggacaggctgctcagcgagggaatctgctccaatgacaacatccccagcgtttcc
tccataaaccgagttctgcgtaacctggccagtgagaagcagcaggtgggggtggatggt
gtgtatgataagctgaggatgttgaacggtcaaattggcacatggggggcacggcctggg
tggtaccctggaactgcagcacctggtcatccaaaccaagatggttgccagcagcaggag
aacagtagtgaaaacacaaattccatcagctccaatggagaggacttggacgaaacccag
atacggctgcagctgaaaagaaaattacaaagaaatcgcacatctttcactcaggaacag
attgaagccctggaaaaagagtttgaaagaactcactatcctgacgtgtttgcaagagaa
agacttgcagccaaaatcgatctcccagaggcaagaatacaggtttggttctccaacaga
agagccaaatggaggagagaagaaaagctgaggaatcagaggcgacaagtcagcagcaac
tccagtcatgttccagtcagcagcaacttcagcaccagcatttaccagcacattccccag
cccagcactcctgtaacttttacatcaggctctatgctggccaggtcggacggcgctttg
acgaactcttatagtggcctgccgcccatgcccaccttcaccatggctaataacctccct
atgcagcctagccaggcctcctactcctgcatgctgcccaccagtacgccagtgaatggg
cggagctacgacacatttccatcccctcatatgcaggcacacatgaacagccaatcaatg
tcaacctctggtaccacctctacaggactcatttcccctggagtttcagtcccggtgcag
atccccggagcagagtcggatatttctcagttctggtcacgactgcagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (25)   

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