KEGG   Astyanax mexicanus (Mexican tetra): 103040550
Entry
103040550         CDS       T05042                                 
Name
(RefSeq) syndecan-2-B
  KO
K16336  syndecan 2
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:amex00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    103040550
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:amex04090]
    103040550
   00535 Proteoglycans [BR:amex00535]
    103040550
CD molecules [BR:amex04090]
 Proteins
  103040550
Proteoglycans [BR:amex00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   103040550
SSDB
Motif
Pfam: Syndecan Glycophorin_A Podoplanin DUF5305 Dsc3_C Cadherin_C_2 ATG22 Peptidase_M50
Other DBs
NCBI-GeneID: 103040550
NCBI-ProteinID: XP_007250505
Ensembl: ENSAMXG00000000209
UniProt: A0A8B9K899
Position
10:complement(9108763..9144163)
AA seq 212 aa
MRNVWMLITLWALCFWGEGVLVSGQPSTADDIYLEEQHSGDYPVDDDDYNSGSGSGFSED
DEDRVSVRKENMNPVETFTQTSSPSLETSSYIDYSSAVDTTEDYQTDTEVFDYQTEGTQG
IDVPTSTSSSPSLSQESEKHHEGKKTSETLFQRTEVLAAVIAGGVIGFLFAIFLILILVY
RMRKKDEGSYDLGERKPPSTAYQKAPTKEFYA
NT seq 639 nt   +upstreamnt  +downstreamnt
atgaggaacgtgtggatgttgataactctctgggctctttgcttctggggtgaaggggtg
ctggtgtcgggtcaaccttccacagctgatgacatctacctggaggaacagcattcaggt
gattatcctgttgatgatgatgactacaactctggctcaggatcaggtttcagtgaagat
gatgaggatagagtgtcagtgagaaaggagaacatgaatcctgtggaaacgttcactcag
accagcagccccagcctggagacgtcctcatatattgattatagctcagctgtggacacc
acagaggactaccagactgacacagaggtgtttgattatcaaactgaggggacacagggc
atcgatgtacccaccagcaccagcagttcccctagtctgtcacaggaatctgaaaagcac
cacgaggggaagaaaacctcagaaaccctcttccagaggacagaggtgctggcagctgtt
atagctggtggtgtgatcggcttcctgtttgctatcttcctcatcctcatcttggtgtac
cgcatgaggaagaaggacgagggcagctacgacctgggggagcgtaaaccacccagcaca
gcctaccagaaagccccaaccaaggagttctatgcctaa

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