KEGG   Astyanax mexicanus (Mexican tetra): 103041974
Entry
103041974         CDS       T05042                                 
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like isoform X1
  KO
K05641  ATP-binding cassette, subfamily A (ABC1), member 1
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex02010  ABC transporters
amex04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:amex00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    103041974
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    103041974
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:amex02000]
    103041974
Transporters [BR:amex02000]
 ABC transporters, eukaryotic type
  ABCA (ABC1) subfamily
   ABCA1, 2, 3, 4, 7, 12, 13 subgroups
    103041974
SSDB
Motif
Pfam: ABC2_membrane_3 ABC_tran AAA_21 AAA_23
Other DBs
NCBI-GeneID: 103041974
NCBI-ProteinID: XP_022537649
Position
21:13305949..13526412
AA seq 1956 aa
MESRVLSARGHNASCCCHNNTPPLHIMGLLTQLRLLLWKNFTLRKRQKLRLVIELVWPLF
LFFILVWVRSTNHPTYKGQCHYSNKPMPSAGILPWVQGMVCNIQNPCLSQPTPGEAPGQV
NNFNNSILSKALIEVQTLLADPALLSNLNLLSGDINQWTSVLQASNQANGRSIPLRSVLK
DNETFSEYLRSNLSVSTQTAQRLMSVRVRLNQLPALSTNSDLRSALCSSTLVDRYLVFNS
TNHRQEFLNITCSLTTNQLQQTREAFVQNVDQRNLVPLFPLALNLNPAEASVLLAKTSLH
AAPVASQLLKFQTSGLLSDANNLDFRSNPFGSLTQLMCGNSGSNSTNNSRSSTPALSLPT
LSTSTLRSNSTHSNSSEFCLNLVNTLKGTPSLRLFWTALRPLLQGRVLYTPDTPFTRRIM
EQANSTFDALSKVELLADAWLENEDEIWKFFQNSSQINTLRTLLQNPVFTAALDQQLSGA
KLSSALIGNFLFNGQEKDRPPGMPSFDWRNIFNITSQAARLLKEVMGCFDLDKFEGVSSE
SLLVQQALKLLDEERFWAGVVFTDLDSGEPSLVRYKIRMDVEDTERTDKIKDRSWSPSAR
DNPFNDLRYVRGGFVYLQDMLDRGIVRAQTGIRETLGVFVQQMPYPCYVDDAFVSSISTI
LPMFLVLAFMNSVGQIIKGLVLEKELRLKEVLRVVGVQNGPLWLAWFTENMVLLSVPCAL
ISVMVKYGKVLRYSDPSVIFVFLLVFCMATVMQCFFISVFFSRANLAAACGGLIYFLLYL
PHVLCQAWRDVITFRAKLATSLLSCVAFGYGCENFARYEEQGVGIQWSNIFVSSQEDDPY
SFFVSIVMMLVDTLMYWILTWYIENVFPGQYGIPKPWYFPFTSSYWCGTPVGSDTEPDAL
DALEDQNGYLEKPPPGLKAGVSIRNLVKVYKTGNKLAVDKLSLDFYQDHITSFLGHNGAG
KTTTMSILTGLFAPTSGTAYVNGFDIRRDMDTIRKKLGMCPQHNVLFNELTVEEHIYFYA
RLKGRSSGEVKQEIEQMIKDVGLPHKRKELAKNLSGGMQRKLSVAIAFVGGSSVVILDEP
TAGVDPYARRGIWELLLKYKQGRTIILSTHHMDEADILGDRIAIISHGRVCCCGSSLFLK
KTYGSGYYLTLVQANQERGARKHQSVNKQQCDDFSLDEGIGSSSLSSEEPTDVADLSALV
RRHVPEAVFLEVLGQELVYILPYTGSKDGSFASLFKELDLEKERLGISSYGISDTSLEEI
FLKVAEETGVDVESNDKDTLVRDWKRSSRESRTHSISSAMEQKEKESSKCEKKKGRFLNR
VEDDQRQSVCLNGKGSSVMSGWPLIRHQFLALFIKRFHHARRSRKGIIAQVVLPAFFVCL
SLIFSLIVPPFVEYPSLELQPWMYGKPQNTFYSTDRPTEAAVTSVTRSLLNEPGFGTRCM
ESNPIPKYPCVPAGATDWSTPAVDPAILKIFQDGNWTMQNPSPDCQCSTPERNIMLPDCQ
PGAGGLPPPQRTQSTTDTLHNLTSYNMTDFLLKTYAKSGKIRYGGISVGGVNSQVMLNES
EIIAAVSDFKALFNSTQSNITDKVFQDLETLLIELGTKDNVKVWFYNQGWHAIASFLNVA
SNAILRASLPSRLQPKLYGISAFNHPLNLTKQQMSAALMSSSTDVVVSICVIFAMSFIPA
SFVLFLIQERVSKAKHLQFVSGVNPAGYWVANFTWDMCNYIVPCLIVIIIFLCFQQKSYV
SPPNLPALILLLILYGWSITPMMYPASFLFSVPSTAYVVLTCINLFIGINGSVATFVMEL
FDDPNITRINDIMKQVLLIFPHFCLGRGLIDMAKNQAMATLFSSLGEDRFKDPLGWDMVG
KNLFAMAVEGVVMFGFTLLIQYKFCWKPGLVKGLPVSLGQEDEDVARERERVHKGGAEND
LLRICDLTKVLLLSFSPHVSKASIKNSHYVALLLVY
NT seq 5871 nt   +upstreamnt  +downstreamnt
atggaatccagagtgctttctgcccgagggcataacgccagttgctgttgtcataacaac
accccaccgctccacataatgggtctcctgacgcagctccggcttctgctgtggaagaac
ttcactctgcgcaagaggcagaagttgcgcttggtaattgagctggtatggcctctattt
ctgttcttcattttggtttgggtgagatccaccaaccatcccacctacaaaggccagtgc
cattactccaacaagcccatgccctcagcaggaattctcccatgggttcagggaatggtg
tgcaacatccagaacccttgcctcagtcagccgactcctggagaagcacctggacaggtc
aacaacttcaacaattccattctttcgaaggctttgattgaggttcagacgcttctggct
gaccctgcccttctctccaacctcaatctgctgtctggtgatatcaaccaatggacttcc
gtccttcaggcgtccaaccaagccaacggtcgatcgattccgttgcgcagcgtgctaaaa
gataatgagacgttctccgagtacctgaggagcaacctgtcagtgtcaacacaaacagcc
cagagactgatgagtgtgagagtccgactcaatcagctgcctgctctctcaacgaactca
gacctccgttctgcgttgtgtagctccaccttagtggatcgctatctggtgttcaactca
accaatcatagacaggaattcctgaacatcacctgctccctgacaaccaatcagcttcag
caaaccagagaggccttcgtccagaatgtggaccaaagaaatctagtccccttgtttcct
ttagcactgaatctaaacccggctgaggcgtctgtgctgctggcaaaaaccagtctccat
gcagctcctgtggccagccagctcttaaagttccagacgtcaggcttactcagtgatgcc
aacaatctggactttcgttcgaatcccttcggtagcttgactcagctgatgtgtggcaat
tcaggctccaactccaccaacaacagcagaagctccacaccagctctttcattaccaact
ctgtccacaagcacactcagatcaaactcaacccacagcaactccagtgaattctgtctg
aatttggtgaacacgctgaaaggcacaccctctctgcgtctcttctggacagctctccgc
ccacttctgcaaggaagggtcttgtacacaccggacacgccctttacacgacggattatg
gaacaggcgaacagtactttcgatgctctgagtaaagtggagttgctggctgatgcctgg
ctggagaatgaggatgaaatctggaagttcttccagaacagctcccagatcaacaccctg
aggactctcctgcagaacccagtgttcacagcagctctggaccagcagcttagtggagcc
aaactctcttctgcgctgatcggcaattttctttttaatgggcaagagaaggaccgacct
ccggggatgccatcgtttgattggaggaacatctttaacatcaccagccaggcagctaga
cttctaaaggaggtcatggggtgttttgatctggataagtttgaaggcgtctccagcgaa
tcactgcttgtgcagcaagctctgaagctgctggatgaagagaggttttgggccggggtc
gtcttcactgaccttgactctggtgaaccctcgctggtccgatacaagatccgcatggac
gtcgaggacaccgagagaaccgataagatcaaagacaggtcctggtccccgtctgctcga
gataacccttttaatgacctgcgctatgtgaggggaggctttgtgtacctgcaggacatg
ctggaccgcgggattgttcgggcgcagacgggcatccgagaaactctgggcgtctttgtg
cagcagatgccttacccgtgctatgtggacgatgcctttgtgtcgtccatctccaccatc
ctgcccatgttcctggtgctggccttcatgaactcagtgggtcagatcatcaaaggcctg
gtgctggagaaggagctgagactgaaggaggtcctgcgggtcgtgggcgtccagaacgga
ccactgtggctggcctggtttactgagaacatggtgctgctgagcgttccctgtgcgctc
atcagcgtgatggtcaagtatgggaaggttctgaggtacagtgacccgtcggtgatcttc
gtgttcctgctggtgttctgcatggccacagtgatgcagtgcttcttcatcagcgtcttc
ttctcacgagccaatctggcggcggcctgtgggggtctcatctacttcctgctctacctg
ccccacgtcctctgccaagcctggagggacgtcatcacattcagagccaaacttgccacg
agtctgctgtcgtgtgtggcgttcggttacggctgtgagaatttcgcccgttacgaggag
cagggggtgggcatccagtggagcaacatcttcgtcagctctcaggaggacgacccctac
agcttctttgtctccatcgtcatgatgctggtcgacactctgatgtactggatcctgacc
tggtacatcgagaacgtgtttccagggcaatatgggatacccaagccgtggtattttcct
ttcacatcctcctactggtgtgggactccggtgggctctgacacagaaccggatgcttta
gatgctctggaagatcaaaatgggtatctagaaaagccccctcctggtctgaaggcaggc
gtgtctataaggaacctggtgaaggtctacaagacaggaaacaagctggctgtggataaa
ctcagcctggacttctatcaggaccacataacctctttcttaggacacaatggagccgga
aaaaccaccactatgtcaattctgaccggcctgtttgcccccacgtctggcacagcttac
gttaacggcttcgacatccgcagagacatggacaccatccggaagaagctgggcatgtgt
ccgcaacacaacgtcctgtttaacgagctgaccgtggaggagcacatctacttctacgcc
cgtctgaagggacgcagctctggggaggtaaaacaggagatagaacagatgatcaaagat
gtgggactgccgcacaagcgcaaggagcttgccaagaacctctcaggtgggatgcagagg
aaattgtcagttgccatagcgtttgttggagggtccagtgtggtgatcctggacgaaccc
acagcaggagtagatccgtacgctaggagaggaatctgggagctgctgcttaaatataag
caaggtcgcacaatcattctgtccactcatcacatggacgaggcagatattctgggtgac
cgtattgcgatcatctctcacggccgcgtgtgctgctgtggctcatccctcttcctgaag
aaaacctatggcagtggatattacctcacacttgtgcaagccaatcaggagagaggggcc
agaaagcaccagagtgtgaacaaacagcaatgtgatgatttcagtctagatgaaggaatc
ggttcgtccagcctcagcagtgaggagccaacagatgtagcggatctgagcgcactggtg
cgccgacacgttccagaagctgtgtttctggaggtcctaggtcaggagctggtgtacatc
ctcccctacaccggctctaaagacggcagcttcgcttcactcttcaaagaactggatctg
gagaaagagaggctggggatcagcagctacggcatctcagataccagcctggaggagata
tttctgaaggtggcggaggagacgggcgtggatgtggaatctaatgataaagatacactg
gtgcgagactggaagaggagctccagagagtccaggacacatagcatcagttcagccatg
gaacaaaaagagaaggaatcttccaaatgcgaaaagaagaaaggaaggttcttaaatcgg
gttgaagatgatcagcgtcagtccgtgtgtttgaacggtaaaggctcgtccgtgatgagc
ggctggcctctaatcagacatcagtttctggccttgttcataaagcgctttcatcacgct
cggagaagcaggaaaggaattatcgcccaggtggtcctgccagcattttttgtgtgtctg
tctctgatcttctctctgatcgtgcctccgtttgtggagtatcccagtctggaactgcag
ccgtggatgtatggaaaaccacagaacactttctacagtactgacaggccgacagaggca
gcggtgacgagtgtgacacgttccctcctgaatgagccagggtttggcacacgatgcatg
gagagcaaccctatacctaaatatccatgtgttcctgctggagcgacagactggtccact
cctgccgtggaccccgccatccttaagatctttcaggatggtaactggaccatgcagaac
ccctcgccggattgccagtgcagcacgcccgagcgcaacatcatgctgccagactgccaa
cccggtgctggaggattaccaccacctcagagaactcagagcacgacagacactcttcat
aacctcactagctataacatgaccgacttcctgctgaagacgtatgcaaagtctggaaaa
attcgttatggagggatatctgttggaggagtgaactctcaggtcatgctgaatgagtcg
gagataattgcagctgtttcagacttcaaggctctgtttaactccacccagagtaatata
actgataaggtcttccaggacttggaaacactgctgatagagctgggaacaaaagataat
gtgaaagtgtggttctataaccagggctggcacgcgatagcgtcgttcctgaacgtggcc
tccaacgccatcctcagagccagtcttccatccagattgcagccaaaactctacggcatc
tcagcctttaaccatccgctcaacctcaccaaacagcagatgtctgctgccttgatgtcc
agttccacagatgtggtggtgtccatctgcgtcatcttcgccatgtccttcatcccggcg
agttttgtcctcttcctcatccaggagcgtgtcagcaaagccaaacacctgcagttcgtc
agcggggtgaaccctgcaggttactgggtcgcaaacttcacctgggacatgtgtaactac
attgtgccgtgtctcatcgtcatcatcatcttcctctgtttccaacaaaaatcatatgtg
tctcctccaaacttgcctgcactcatcttactgctgatcctctatggctggtcgatcact
cccatgatgtaccctgcctccttcctgttcagtgttcccagcacagcgtacgtggtgctc
acctgcatcaacctcttcatcggcatcaacggcagcgtcgccaccttcgtcatggagctg
ttcgatgacccgaatatcactcgtatcaacgacattatgaagcaggtgctgttaatcttt
cctcatttctgtctgggccgaggactcatcgacatggctaaaaaccaggccatggctaca
ctctttagcagcctgggtgaggacaggtttaaggaccctctgggctgggatatggtgggg
aagaatctgttcgccatggccgttgagggggtggtgatgttcggatttacgcttcttatc
cagtacaagttctgctggaagcctgggctggtgaaggggttgcctgtttctctgggtcag
gaggatgaagacgttgcccgggaacgtgagcgagtgcacaagggtggagcggagaacgac
ctgctccggatctgtgacctcaccaaggtgcttcttctttcattttcacctcatgtttct
aaggcttcaatcaaaaacagccattatgtagcattactgctagtctattag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (59)   
   KEGG ORTHOLOGY (1)   
   RefGene (55)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (4)   
   Pfam (4)   
All databases (76)   

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