KEGG   Astyanax mexicanus (Mexican tetra): 103042186
Entry
103042186         CDS       T05042                                 
Symbol
thsd1
Name
(RefSeq) thrombospondin type-1 domain-containing protein 1
  KO
K24433  thrombospondin type-1 domain-containing protein 1
Organism
amex  Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:amex00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:amex04990]
    103042186 (thsd1)
Domain-containing proteins not elsewhere classified [BR:amex04990]
 Thrombospondin domain-containing proteins
  Other thrombospondin domain-containing proteins
   103042186 (thsd1)
SSDB
Motif
Pfam: TSP_1 TSP1_spondin TSP1_ADAMTS TSP1_CCN
Other DBs
NCBI-GeneID: 103042186
NCBI-ProteinID: XP_007252519
UniProt: A0A8T2L2P5
Position
20:complement(25294723..25303083)
AA seq 881 aa
MTQGFTPLIPFLLLLMGFAMAGLHLWPSVHVALSNGSVFVNYDAVGNLTDEELAMALVDI
DKNVTVLTKPLQFNQSGGSLEFDCACFLYAGNFSFKIEQRAQQGSSNKTSSQWWSPVLRV
QWPTFHLGVERASNNHSSDAFQIAVSTNDHFHACSSSKTSSLYLEVSYLEHNQIGKKSID
KVQNRMRRDIKVVKSQQVELDCASQLTERGFIQVALKSHLSQQDIKSSGPLYLSRIFSYK
LLVENIYRNGCEGTVSVRLLSPPCTVTTGKVLLYKEVNTAAEQADPSQLAFNFLSQGENE
TEFNCSVFDLGRNKYCFHFALIYSQSPSSAHTCIIVQRNAVEIWGPWQTWSGCSVTCGEG
VRERVRECLLPSSGGMQCTGLVRDQSHCSLEDCAEDLPPPSFPPPPALHSFLGGNMVVVA
GISLCLVVILITIIITVWRKLCHAPKCSSVRRESMHSPSGRKNSDEASICGYSLQRPSFS
ESLQATGPQKGLTYPGSASDKGVLARQQSLSLPLPLVQDPERLSPSGQKILPPIFGYRLA
QQQLKEMKKQGLKETTQVYHVSQSPIDDTMLEATASTSAGLTPVPQEMENQEEPNIGRFH
LPPKSPFSEPMWPHKNSATLPDRLSPKVDLILGTPKSAFSAREQRQERTADWVAMVERSR
LDCSKNPNFRRTCSFNESQLQQLPPPRPFRERSMTQVAPRQLPEGSCRTRAWEHPIPEME
DWSRPKYGIPDSSRDQRRRPWVGTPPSLSKSKPVAGNLGTSPPTKDPLNNSRSLGRAPSL
GMDRVERAEQSWSRRGPSPIQRNILARKLREANSSASSQRQRSSTFSSSDQRKGRCRSLP
LSADYSNSSYGLTDSEKRMMDISGYLGEEDGLEVMKDHRLT
NT seq 2646 nt   +upstreamnt  +downstreamnt
atgacacagggtttcaccccactgatcccatttctgctgctgcttatgggatttgcaatg
gccggtctccatctgtggccctcagttcacgttgctctgagcaatggcagcgtttttgtc
aattacgacgcagtcggaaacctgacggacgaagagctggccatggctttggtggacatt
gataagaatgtaaccgtgctgaccaagcctctccagtttaaccagtctggaggctcattg
gagtttgactgcgcatgcttcttgtacgctggaaatttcagcttcaagatagagcaaaga
gcccagcagggctcatctaacaaaacatctagccagtggtggagcccagtattgcgagtc
cagtggcccactttccatcttggagtggagcgggctagcaacaatcacagctcagacgcc
tttcaaatcgctgtgtccactaatgaccacttccacgcctgctccagcagcaagacctca
tccctctacctggaggtcagctacctggagcacaaccagatcgggaagaaaagcatagac
aaggtgcagaaccgcatgaggcgtgacatcaaggtcgtcaagtcccagcaggtggagctg
gactgcgcttcccagctgaccgaacgtggcttcatccaggtggccctcaaatcccacctc
tcccagcaggacatcaaatcctcagggccgctctacctttcccgcatcttttcctacaag
ctgctggtggagaacatctacaggaatggctgtgagggcacagtgtcggtccgcctgctc
tccccaccctgcacggtcaccactgggaaagtgctgctgtataaggaggtcaatacagct
gcagagcaagcagatccatctcagctggcttttaacttcctcagccaaggcgagaatgag
accgagtttaactgctctgtcttcgacctcggcaggaataagtactgcttccattttgcc
ctcatctacagccagtctcccagttcagcacacacctgcatcatcgtgcagaggaatgct
gtagagatctggggcccctggcaaacgtggagcggctgcagcgtgacctgtggcgaggga
gtgcgagagcgagtgcgtgagtgtctgctgccttctagtggtggcatgcagtgcactggc
ctggtgagagatcagtcacactgctccctggaagactgcgctgaggacctgcctcctcct
tccttcccacctcctccagctttgcactcttttctggggggaaatatggttgtggtggcc
ggtatctctctgtgtctggtggtcatcttgatcaccatcatcatcacagtttggaggaaa
ctgtgccacgctccaaagtgcagctcggtgcgacgtgaatccatgcattctcccagcggg
cgcaaaaactcagacgaggcttctatctgtgggtacagtctgcagagacccagtttctcg
gagagtctgcaggccactggacctcagaaaggtctaacatatcccggatctgcatcagac
aaaggtgtattggctcgtcaacagagcctttcgctacctttgcccttggtccaggaccct
gaacggttgtcaccttctggtcaaaagattctgcctccgatttttggttatcgtttggct
cagcagcagcttaaagaaatgaaaaagcagggacttaaagagaccactcaggtctatcat
gtctctcaaagtcctattgatgacactatgttggaggccacagcgtccacgtctgctggc
ttgacaccagtgcctcaggaaatggaaaaccaagaggaacccaatattggtcgcttccac
cttccaccaaagtcccctttctcagagccgatgtggcctcacaaaaactctgcaactctg
cctgacaggctaagccctaaggttgatctgatactgggcacaccaaagtctgccttcagt
gccagggagcagcgccaggaacgcactgcggactgggtggcaatggttgagcgcagtcga
ctcgattgctccaagaatccaaatttcaggaggacttgtagtttcaacgagagccagctg
cagcagctgcctccaccgcgtcccttcagggaaaggagcatgacccaggttgcaccacgc
cagcttccagaaggcagctgcaggaccagagcctgggagcatcccattccagagatggag
gactggtctcgacccaaatatggaataccagacagctcacgtgaccagagaaggagacca
tgggtgggcactccaccttccctctcaaaatccaaaccagttgctggaaatttagggact
tcaccaccaaccaaagatcccctgaacaacagtcgctcattgggcagagcaccttctttg
ggtatggacagagtggagagggcagaacagagctggagccggagaggcccttcacccatc
cagaggaacattctggccaggaaacttcgggaagccaactcgtctgctagcagccagcgg
caaagaagttctaccttttccagctctgatcagcgcaagggccgctgcaggagccttcca
ctctctgcagactacagtaactcctcttacggcctgactgactctgagaaacgcatgatg
gacatctctggatacctgggagaggaggatggactggaggttatgaaggaccacagactt
acctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (38)   

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