KEGG   Astyanax mexicanus (Mexican tetra): 103043246
Entry
103043246         CDS       T05042                                 
Symbol
ddx49
Name
(RefSeq) probable ATP-dependent RNA helicase DDX49
  KO
K14778  ATP-dependent RNA helicase DDX49/DBP8 [EC:5.6.2.7]
Organism
amex  Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:amex00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:amex03009]
    103043246 (ddx49)
Enzymes [BR:amex01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     103043246 (ddx49)
Ribosome biogenesis [BR:amex03009]
 Eukaryotic type
  90S particles
   Helicases
    103043246 (ddx49)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII P-loop_SecA AAA_22 DUF3137
Other DBs
NCBI-GeneID: 103043246
NCBI-ProteinID: XP_007233202
Ensembl: ENSAMXG00000016919
UniProt: A0A8B9GUD6 W5LC52
Position
5:17302079..17307013
AA seq 475 aa
MEAFAALGLSDWLIQQCKQMGITRPTPVQQSCVPAILAGRDCMGCAKTGSGKTAAFVLPV
LQKLAEDPYGIFCLVLTPTRELAYQIAEQFRALGKPLGLRDCIIVGGMDMVAQGLELSKK
PHIVVATPGRLADHIRSSDTFNMKRIKFLILDEADRLLEQGCTDFTKDLEVILSVVPAKR
QTLLFSATLTDTLQELKTIAMNEPFFWENKSEVRTVDELDQRYILTPEKVKDAYLVHLIQ
KIQDEHDDWSVMIFTNTCKNCQILTMMLREFKFPAISLHSMMKQRQRFANLAKFKSNVFK
ILIATDVAARGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRNGVSITLVTQYDIHLV
NAIEEQIQTKLKEYPVEEKEVLKILTQVNVTRRQCEIKLESTDFGEKKEINKKKKMILEG
KDPDFEEKRKNELAKRKKGKAEGKGRIQEIIHQKKKGKLVKKKGKKTKATLPGQS
NT seq 1428 nt   +upstreamnt  +downstreamnt
atggaggctttcgcggcgctcggcctgtccgactggctgatccagcagtgtaaacaaatg
ggcatcacccggccgactcccgtccagcagagctgcgtaccggccattctagcaggtcgg
gattgtatgggctgtgcgaaaactggaagcggcaaaacggcagcttttgttttaccagtg
cttcagaaactggcggaggatccctatggaatcttctgcttggtgttgacacccacaagg
gaactggcctaccagatagctgaacagttccgggcactagggaaaccactgggtttgaga
gactgcatcatagttgggggaatggacatggtggcccagggtctggagctgtctaaaaag
ccacacattgttgttgccactccggggagattagcagatcacattcggagttctgacaca
ttcaacatgaagagaatcaaatttttgatcttggatgaagcagatcgtttgcttgagcag
ggatgcacagacttcaccaaggacctggaagttattctcagtgttgtgccagcaaaacgg
caaacgctgttgttcagcgccacactaacggacacactgcaggagctaaaaaccattgct
atgaatgagcctttcttctgggagaacaagtcagaggtccgaacagtggatgagcttgat
caaagatacatccttacacctgagaaagtcaaagatgcttacttggtgcatcttattcag
aaaatccaagatgaacatgatgactggtcagtcatgattttcaccaacacatgcaaaaat
tgccaaattcttacaatgatgcttcgtgaatttaaatttcccgcaatctccctgcattcc
atgatgaaacagagacaacgatttgcaaaccttgccaagttcaagtccaatgttttcaag
atcctgatagccacagatgttgctgccaggggtctggatattcctacagtgcaggttgtc
attaatcataatactccaggactgcctaaaatctacattcatagagtgggcaggactgcc
cgtgccggaagaaatggtgtttcaattacactggtcacacagtatgacattcatctggtc
aatgctattgaggagcagatccagaccaagctaaaggagtacccagtggaagagaaggag
gtgctaaagatccttacccaagtgaatgtgacgcgacgacagtgtgaaattaaattggag
tcaacagactttggggagaaaaaggaaataaacaaaaagaagaaaatgatcctagaaggg
aaagatcctgactttgaagagaagagaaaaaatgaacttgctaaaagaaaaaagggaaaa
gcagaaggaaaggggagaattcaggaaattattcatcagaagaagaaaggaaagcttgtt
aaaaagaaaggaaagaaaaccaaagccacacttcccggacagtcataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (32)   

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