KEGG   Astyanax mexicanus (Mexican tetra): 103045759
Entry
103045759         CDS       T05042                                 
Symbol
nup58
Name
(RefSeq) LOW QUALITY PROTEIN: nucleoporin p58/p45
  KO
K14307  nucleoporin p58/p45
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:amex00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    103045759 (nup58)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:amex03019]
    103045759 (nup58)
Messenger RNA biogenesis [BR:amex03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     103045759 (nup58)
SSDB
Motif
Pfam: Nucleoporin_FG2 FapA PSY3 PBC Nup49_C Spectrin
Other DBs
NCBI-GeneID: 103045759
NCBI-ProteinID: XP_007252362
Ensembl: ENSAMXG00000007780
UniProt: A0A8B9KUN3
Position
3:18835490..18856028
AA seq 642 aa
MSGFNFGTSTLGSTNTGGGFSFGAATSAPAAATGGFAFGGLGGVTSTPAAATTTTTSSLG
LGGSLFAQKPTSGFSFNTPASGATAPSTGLTLGAPAASTAASTGFSFGFGKPAATAAPFS
LTTTTAAPPAATGLSLSSVLTSSTPQTGSTGFSLNLGGAAPASSAPATGLGLGASLFSSP
AATGLGQPTLGQSTLGQATLGQSTLGQATLGQSTLGQPTFLQSTLGQSTLGQPTLGGGLS
LGGLLASSTATTVPLVPAPSVGLGGVDFSTSSENKSDKSSSARPEDSKALKDENLPAPIC
QDVDNFQKFVKEQKQVQEEISRMSSKAMVKVQDDIKSLKQLLSVSASGLQRNALSIEKLK
METAQELKNADVALRTQKTPPGLQHENTAPSDYFRGLVEQFEVQLQQYRQQIEELENHLT
TQGSSAHITPQDLSQAMQKLYQTFVALAAQLQAVHENVKTLKHQYLNYRRAYLEDSTDVF
ELKRTASRKLQSAPRVTTGPAPFGAVPNAAAVAMAATLTQQQQPAPGTQAPLGVGFGTPF
ALGMGTSMSSTSLGAFGSGPGFGAVATGGSSFGFSASKPSGGSLSAGFGSSSTSGFNFSN
PGINASAGLTFGVSNTATPGFGAGGPLLQLKKPPAGNKRGKR
NT seq 1929 nt   +upstreamnt  +downstreamnt
atgtcgggctttaactttggaacaagcactctaggatccacaaacactggcgggggcttt
tcatttggagctgcgaccagtgcccctgctgcagccactggtggctttgcttttggtggt
ctgggaggagtgacctcgactcctgctgctgctactaccaccaccacctcctccctgggt
cttgggggcagcttgtttgctcagaaaccaacaagtggattctctttcaacacacctgcc
tcaggagcgactgcaccatctactggccttacattaggagctcctgctgcatctactgcc
gcttccacaggatttagctttgggtttgggaagccagcggccactgcagctccgttttca
ctgacgaccaccactgccgcgcccccagcagcaacaggcctgtcactgagttccgtcctc
acctcttccactcctcagaccggctccacaggcttctcactgaacctgggaggagcggca
cccgcctcgtctgccccggccacaggccttggtcttggtgcttctctgttctccagccct
gctgcaacaggcttagggcagcctactctcgggcaatcaacacttgggcaggcaactctc
ggccaatcaacacttgggcaggctactctcggccaatcaacacttgggcaacccactttc
ttgcaatcaactcttggacagtcaactcttgggcagcccactctcggtggaggattgagt
ctaggtggcctgctcgcgtcctctacagcaaccactgttcctctcgtccctgcccccagt
gtgggtttgggtggagtggacttcagtacctcttcagagaacaagagtgacaaatcatcc
agtgcgagacctgaagacagcaaagctctcaaagatgagaatcttccagctcccatctgt
caagatgtggacaatttccaaaagtttgtgaaggagcagaagcaagttcaagaagagatc
agcaggatgtcctctaaagccatggttaaagtgcaggatgacattaagagcctgaagcag
ctgctgtcggtcagtgccagtggactgcagcgaaatgccctctccatagaaaaactcaaa
atggagactgcccaggagttaaagaatgcggatgttgcgctgagaactcagaagacaccg
cctgggcttcaacatgagaatactgcaccatctgattatttccggggtcttgtggagcag
tttgaggtgcagttacagcagtaccgccagcagatagaggaactggaaaatcatctgacc
acccagggcagcagcgcccacatcacccctcaagatctgtcccaggcaatgcagaagctt
taccagacgtttgtggctctggcagcacaactgcaagcagttcatgagaatgtaaagaca
ttgaagcatcagtatctaaactacagaagagcctatctggaggactccacagacgtcttt
gagctaaagcggacggccagccggaaactgcagagcgccccgcgagtgaccactggccca
gctccttttggtgccgtccccaacgctgcagccgttgccatggctgccactctcactcag
cagcagcagcccgctccaggaacacaggcgcccctgggggtgggttttgggactcccttt
gccttgggcatgggcactagtatgagttctaccagccttggagcttttggtagcggccca
gggttcggggctgtggcaactggaggctcctcattcggtttttctgctagcaagccatct
ggagggagcttgagcgcagggttcgggagctccagcacctcaggcttcaacttcagtaac
ccaggtatcaatgcgtcagctggcctcacctttggggtgtccaacactgcaacaccagga
tttggcgcaggaggacctctgctgcagctcaaaaaacctcctgcaggaaacaagaggggc
aaaagatag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (38)   
   KEGG ORTHOLOGY (1)   
   RefGene (33)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (6)   
   Pfam (6)   
All databases (55)   

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