KEGG   Astyanax mexicanus (Mexican tetra): 103045919
Entry
103045919         CDS       T05042                                 
Symbol
vdr
Name
(RefSeq) vitamin D3 receptor isoform X1
  KO
K08539  vitamin D3 receptor
Organism
amex  Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:amex00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:amex01009]
    103045919 (vdr)
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:amex03000]
    103045919 (vdr)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:amex03310]
    103045919 (vdr)
Protein phosphatases and associated proteins [BR:amex01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     103045919 (vdr)
Transcription factors [BR:amex03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    103045919 (vdr)
Nuclear receptors [BR:amex03310]
 1. Thyroid hormone like
  1I. Vitamin D3 like receptor
   103045919 (vdr)
SSDB
Motif
Pfam: zf-C4 Hormone_recep PCF11_charged ArsA_ATPase
Other DBs
NCBI-GeneID: 103045919
NCBI-ProteinID: XP_007240874
Ensembl: ENSAMXG00000019854
UniProt: W5LKT3 A0A8T2LH01
Position
15:30773395..30906802
AA seq 470 aa
MLGEATRIFSDFGNFPEDAAGQIWQPGARSLTPTNTKSASPAPGDVPSVMEAMAVSTSAQ
GPDEFDRNAPRICGVCGDKATGFHFNAMTCEGCKGFFRRSMKRKASFTCPFNGSCTITKD
NRRHCQACRLKRCVDIGMMKEFILTDEEVQRKKELILKRKEEEAAREAQKPRLSDEQTQI
ISTLVEAHHKTYDDSYSDFARFRPPVREGPVTRSASRAASLHSLSDASSDSFNHSPESVD
TKLNFSSLLSMYQEGTGSPDSSEDDNSRLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLT
AEDQIALLKSSAIEIIMLRSNQSFSLEDMSWSCGGPDFKYCITDVTKAGHTLELLEPLVK
FQVGLKKLNMHEEEHVLLMAICLLSPDRPGVQDHARIEALQDRLCEVLQAYIRINHPGGR
LLYAKMIQKLADLRSLNEEHSKQYRSLSFQPEHSMQLTPLVLEVFGSEVS
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgcttggagaggcgacacggatattttctgatttcggaaactttccagaggacgccgct
ggacaaatttggcaacctggcgcgagaagtttaacacccaccaacaccaagtccgccagt
ccagcacccggtgatgtcccatcagtaatggaggccatggcagtgagcacatctgcacag
ggtccagatgagtttgaccggaatgctccgcggatctgtggtgtctgtggagacaaggcc
accggatttcactttaatgctatgacctgcgagggctgcaagggctttttcagacgcagc
atgaagcgcaaggccagtttcacatgcccctttaacggcagctgcaccattaccaaagac
aaccgcagacactgccaagcctgccgcctcaaacgctgcgtcgacatcggcatgatgaag
gagtttattctgactgatgaggaggtacagaggaagaaggagctgattctgaagcgtaaa
gaggaggaggcggcgcgggaggcacagaagccccgtcttagtgatgagcaaactcagatc
atcagcacgctggtggaggcacaccacaaaacctatgacgactcttactccgacttcgcc
agattcagacccccagtgagagagggtcctgtgacccgcagtgcgagtcgtgctgcttcc
ctccactcactttcagatgcgtcttcagactccttcaaccactcaccagagtctgtggac
actaagctgaacttcagcagtctgttatcgatgtatcaggagggtacaggaagcccggac
tcgagcgaggatgacaactcccggctctccatgctgccccacctggctgatttggtcagc
tacagcattcagaaagtcattggctttgccaagatgatccccggcttcagggatctgact
gcagaggatcagatagctctgctaaagtctagcgctatagagatcatcatgctgcgctct
aatcagtcctttagtttggaggatatgagctggagctgtggaggacctgactttaaatac
tgcatcaccgatgtgacaaaggctggtcacactctggagctgctggagccgctggtgaag
tttcaggtgggactgaaaaagctcaacatgcatgaagaggaacacgtgctgctcatggcc
atctgtctcctctccccagaccggccaggtgtgcaggaccatgctcgtatcgaggctctg
caggaccgtctgtgtgaggttctccaggcctacatccggatcaatcacccgggcgggaga
ctgctctatgccaaaatgatccagaagctcgcagacctgcgcagcctgaacgaggagcac
tccaagcagtaccgctcgctgtctttccagcctgagcacagcatgcagctcaccccgctt
gtgcttgaggtgttcggcagtgaggtgtcctag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (26)   

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