KEGG   Astyanax mexicanus (Mexican tetra): 103046289
Entry
103046289         CDS       T05042                                 
Symbol
arfgef1
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 1 isoform X1
  KO
K18442  brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:amex00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    103046289 (arfgef1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:amex04131]
    103046289 (arfgef1)
Membrane trafficking [BR:amex04131]
 Endosome - Golgi transport
  Arf GTPases and associated proteins
   Arf GTPase associated proteins
    103046289 (arfgef1)
SSDB
Motif
Pfam: Sec7 BIG2_C Sec7-like_HDS Sec7-like_HUS Type_ISP_C
Other DBs
NCBI-GeneID: 103046289
NCBI-ProteinID: XP_022541293
Ensembl: ENSAMXG00000001208
Position
3:complement(40319929..40358619)
AA seq 1332 aa
MQIEVFFKEIFLYILETSTSSYDHKWMVIQTLTRICADAQSVVDIYVNYDCDLNAANIFE
RLVNDLSKIAQGRGGHELGTTPLQELTLRKKGLECLVSILKCMVEWSKDQYVNPNSQTSL
GVAGQEKPSEQESNESKHPETINRYGSINSLDSTASSGIGSYSTQMSGTDNPEQFEVLKQ
QKEIIEQGIDLFNKKPKRGIQYLQEQGMLGTTPEDIAQFLHQEERLDSSQAGEFLGDNDR
FNKEVMYAYVDQMDFQGKDFVSALRMFLEGFRLPGEAQKIDRLMEKFAARYLECNQGQTL
FASADTAYVLAYSIIMLTTDLHSPQVKNKMTKEQYIKMNRGINDSKDLPEEYLSAIYDEI
AGKKISMKETKELTLKSNKQSVASEKQRRLLYNVEMEQMAKTAKALMEAVSHVQAPFTSA
THLEHVRPMFKLAWTPFLAAFSVGLQDCDDTEVASLCLEGIRCAIRIACIFTIQLERDAY
VQALARFTLLTASSGITEMKQKNIDTIKTLITVAHTDGNYLGNSWHEILKCISQLELAQL
IGTGVKARYISGTVRGKEGFITSTKEQTSDEYLGIVGGTVDRKQIASIQESIGETSSQSV
VVAVDRIFTGSTRLDGNAIVDFVRWLCAVSMDELASPTHPRMFSLQKIVEISYYNMGRIR
LQWSRIWEVIGDHFNKVGCNPNEDVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFE
HIMKKNRSPTIRDMVVRCIAQMVNSQAGNIRSGWKNIFSVFHLAASDQDESIVELAFQTT
GHIVTNVFEKHFPATIDSFQDAVKCLSEFACNASFPDTSMEAIRLIRHCAKYVSDRPQAF
KDYTSDDMNVAPEDRVWVRGWFPILFELSCIINRCKLDVRTRGLTVMFEVMKTYGHTYEK
HWWQDLFRIVFRIFDNMKLPEQQTEKAEWMTTTCNHALYAICDVFTQYFESLSDVLLDDI
LSQLYWCVQQDNEQLARSGTNCLENVVILNGEKFTPETWDKTCNCMLDIFKTTIPHVLLT
WRPAGGSGDHMTQLDSDKQLDSVSQKSVDIHSRSEDQQSISSMEKALAENRRHSQFSVAS
AEAQEQRLFAALLIKCVVQLELIQTIDNIVFFPATSKKEDAENFAAAQRDALGADVQVET
QDQGMYRYLTSEQLFKLLDCLLESHRFAKAFNSNNEQRTALWKAGFKGKSKPNLLKQETS
SLACGLRILFRMYTDSSRQDAWEEVQRRLLNVCSDAVAYFLTLTSESHREAWTNLLLLFL
TKVLKISDDRFKAHATHYYPLLCEIMQFDLIPELRAVLRKFFLRIGLVFHIAQTLEPELS
SEPNSPQTPQEA
NT seq 3999 nt   +upstreamnt  +downstreamnt
atgcaaatcgaggtgtttttcaaagagattttcctctacatcctggagacgtccacaagc
tcatatgaccacaagtggatggtcattcagaccctcactagaatatgtgctgatgcccag
agcgtggtggatatctatgtgaattatgactgtgacctgaatgctgctaatatatttgag
aggctggtgaacgacctgtccaagattgcacagggcagaggaggccacgagctgggcacg
accccactacaggagctcaccttgaggaagaaagggctggagtgtctggtctccattctc
aagtgcatggtcgagtggagcaaggatcaatacgtgaaccctaactcgcagaccagcctt
ggtgtcgcaggccaggagaagccttcagaacaggagtcgaatgagtccaagcacccagag
accattaaccgctatggcagcattaactctctggactccaccgcctcctccggcatcggc
agctacagcacgcagatgtccggcacagacaaccctgagcagtttgaggtgctcaaacag
cagaaggagatcatcgagcagggcattgacctgttcaacaaaaaaccaaagaggggcatt
cagtacctgcaagaacaaggcatgctgggaaccacccccgaggacatcgcccaattttta
catcaagaagaaagactagattcgagtcaagcaggagagtttctgggagacaacgatcgc
ttcaacaaagaagtgatgtatgcctatgtggaccaaatggatttccagggcaaagacttc
gtatcagccctgcggatgttcctggagggcttccggctccctggagaagcccagaaaatc
gatcgcctgatggaaaaatttgctgctagatatttagagtgcaaccaagggcaaacactg
ttcgccagtgcagatacggcatatgtccttgcttattcaatcatcatgctgaccacagac
ctccatagtccacaggtgaagaataaaatgacaaaggagcaatacatcaagatgaacaga
ggcatcaatgatagcaaagatttgccggaagagtatctgtcagccatctatgatgaaatc
gctgggaagaagatatccatgaaggagacgaaagaattaacactcaaatcaaataaacag
agtgtggccagtgagaagcaacggcggctgctctataatgtggaaatggagcagatggcg
aagacagcaaaggctctaatggaggcagtcagccacgttcaagctccgtttaccagcgcc
actcacctggagcatgtcaggccaatgtttaagctggcctggacgccgttcctagcagcc
ttcagcgtgggcctgcaggactgcgatgacactgaggtggcctctctttgcctggagggc
atccgctgtgccatcagaatagcctgtatcttcaccattcagctggagcgagatgcatat
gttcaggccctggctcgcttcactttgctcacagctagctcgggcatcactgagatgaag
cagaagaacattgacactatcaagaccctcatcacagtggctcacactgacgggaactat
ctaggaaactcctggcatgagattctgaagtgcattagtcagcttgagctggcccaactc
ataggaacaggggtgaaggctcgctacatatctggcactgttcgaggtaaagagggcttc
atcactagcaccaaagagcagacatcagacgagtatcttggcattgttggggggactgta
gatcggaaacagattgccagcatacaagaatccatcggcgagactagctctcagagtgtg
gtggttgctgtggacaggattttcacaggatccactagattggatggaaatgccatcgtt
gattttgttcgttggctgtgtgccgtatcaatggatgagctcgcctccccgacacatcct
cgtatgttcagcttgcaaaagattgtggagatctcctactacaacatgggccgcatcagg
ctccagtggtccaggatctgggaggtgataggagatcatttcaacaaagtcggctgtaat
cccaatgaggatgtcgctatcttcgccgtggactcgctcaggcagctatccatgaaattt
ttagagaaaggagagctggccaatttcaggtttcagaaggacttcttgaggccatttgag
cacatcatgaaaaagaacaggtccccaaccatcagggacatggtggtccgctgtatagct
cagatggtgaactcacaggcgggaaatatccgctcaggctggaagaacatcttctctgtg
ttccacctggctgcctccgatcaggacgagagcatcgtggagcttgcctttcaaaccact
ggacatatcgtcacgaatgtattcgagaagcacttccccgccaccatagactccttccag
gatgccgtcaagtgtctgtcagagtttgcctgtaatgcttctttccccgacaccagcatg
gaggccatccgtctgatccgccactgtgccaaatacgtctctgacaggccacaggccttt
aaagactacacgagtgatgacatgaatgtagcccctgaggaccgggtgtgggtccgaggc
tggttccccatcctattcgagctctcctgcatcatcaacaggtgcaagctggatgtcaga
accaggggtttgacagtaatgtttgaagtaatgaagacttacggtcatacatatgaaaag
cactggtggcaggacttgttccgcatcgtctttagaattttcgacaacatgaagctgccg
gagcaacaaactgagaaagcggagtggatgaccactacttgtaatcatgcgctttatgcc
atttgtgacgtcttcacgcaatactttgagtctctgagtgatgttctgctggatgacatt
ctctctcagctctactggtgtgtgcagcaagataatgagcagctggccaggtcaggaacc
aactgcctggagaacgtggtcatcctgaatggagagaagttcacaccggagacctgggac
aaaacctgcaactgcatgctggacatcttcaaaaccaccatcccacacgtgttgttgact
tggagaccggctggtgggagtggagatcacatgacccagctggactcagacaaacagctg
gattctgtgtcccagaagtctgtggatatccattctcggtcggaggatcagcagtccatc
agcagtatggagaaggcgctggcagagaaccggaggcacagtcagttcagcgtggcttca
gcagaagcccaggagcagaggctgtttgcagcgttgcttataaagtgtgtggtgcaactg
gagctcattcagaccatcgacaacatcgtcttcttcccggccaccagcaaaaaagaggat
gctgagaatttcgcagctgcacagagggatgctctgggcgctgatgtgcaggtggagact
caggaccagggaatgtaccgctacctgacctctgagcagctgttcaagctgttggactgc
ctgctggagtcccatcgcttcgccaaggcctttaactccaacaacgagcagaggactgcc
ctgtggaaggctggtttcaaagggaagtccaaacccaatctgctgaaacaggagaccagc
agcctggcgtgtggcctgcggattctcttccgtatgtacacggactccagcagacaagat
gcctgggaagaggtgcagagacgactgctcaatgtgtgcagcgacgctgtggcctatttc
ctcaccctgacatcagagagccaccgcgaggcctggaccaacctgctcctcctcttcctc
accaaagtgctgaagatcagtgatgacaggtttaaagcccatgccacccactactaccct
ctcctgtgcgagatcatgcagttcgacctgatcccggagctgagagccgttctgaggaag
ttcttcctgcggatcgggctggtgttccacatcgcacagacactggagccggagctgagc
tcagagcccaacagtcctcaaacacctcaagaagcttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (5)   
   Pfam (5)   
All databases (34)   

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