KEGG   Astyanax mexicanus (Mexican tetra): 103047876
Entry
103047876         CDS       T05042                                 
Symbol
grhl1
Name
(RefSeq) grainyhead-like protein 1 homolog isoform X1
  KO
K09275  transcription factor CP2 and related proteins
Organism
amex  Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:amex00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:amex03000]
    103047876 (grhl1)
Transcription factors [BR:amex03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   Grainyhead
    103047876 (grhl1)
SSDB
Motif
Pfam: CP2
Other DBs
NCBI-GeneID: 103047876
NCBI-ProteinID: XP_022528282
Ensembl: ENSAMXG00000011769 ENSAMXG00000017898
Position
9:complement(1234345..1265414)
AA seq 624 aa
MSQEHDNKRAVLVLQNDPAYSQRRSFTSEDEAWKSFLENPLTAATKAMMSINGDEDSAAA
LGLLYDYYKVPREKRTISQPKADILGSDVDPNKSRNLMASLPETSMASAENRIQVLKGVV
LPGSIVLPGNLQGNHSVVQDKRALFPSPDTTVTVSIAAVPNYPVKTEMPSHGFSVTVPNP
HCSEPDNHSVVFDRQLAHSQFSPNTQPRTPDSTFPETFKDGAQEVFSFPGDLQLRMASMA
QEEYAAFGTVSGNNFEYTMEASKSLRQKSGDGTMTYLNKGQFYPITLKETDNNKVLHHPI
CKVRSVVMVVFGEEKCRDDQLKHWKYWHSRQHTAKQRCIDIADYKESFNTISNIEEIAYN
AISFTWDINEEAKIFISVNCLSTDFSSQKGVKGLPLNLQIDTYSYNNRSNKPIHRAYCQI
KVFCDKGAERKIRDEERKQSRRKGKCTDVNTGLAAFVDVKVPLLHKRSDITTFKMMADLE
TQPVLFIPDIHFTNFQRHPFSSEDAEDGSGMKRLPFSEEEFGSPPNKLARVDEPKRVLLY
VRKETEEVFDALMLKTPTLKGLVEAISEKYDVPLEKLGKVYKKCKKGILVHMDDNIIKHY
SNEDTFQIHMEEMGGMVKLTLTEI
NT seq 1875 nt   +upstreamnt  +downstreamnt
atgtcacaggagcatgacaataaacgggcggtgctggtgctacagaatgatccggcgtac
agccagcgtcgctccttcaccagcgaggatgaagcctggaaatcctttctggagaacccg
cttactgctgccaccaaggccatgatgagcatcaatggagatgaagacagtgcggccgct
ttgggcttgctttatgactattataaggtgccgcgggaaaagaggacaatatcccagcca
aaggccgacatcctgggctctgatgtggatcccaacaaaagcaggaatctgatggcttcg
ctccccgagacgtccatggcgtcggccgagaacaggatccaggtcttgaagggagtcgtc
cttccaggaagcatcgtccttccaggaaaccttcagggaaaccattcggtggtgcaagac
aagagggcacttttcccctcgcccgacaccacggtcaccgtgtccatcgccgccgtgccc
aactacccggttaagacggaaatgccgtcgcacggtttctccgtcaccgttcccaacccg
cactgctcagagccggataaccattcggtggtttttgaccggcagctcgctcacagccag
ttcagtcccaacacccagcctcgcacgcccgattccacctttccagagaccttcaaagac
ggcgcccaagaggtgttctcgttcccaggggatctccagttacgaatggcctccatggcg
caggaggagtacgccgctttcggcaccgtgtcgggtaataatttcgaatacacaatggaa
gcctcaaagtccctccgtcagaagtcaggcgacggcaccatgacgtacctcaacaagggc
cagttctaccccatcactctgaaggagactgacaacaacaaagtcctgcatcatcccatc
tgtaaagtcaggagtgtggtgatggtggtgtttggagaagagaagtgcagggatgatcag
ctcaagcactggaagtactggcactccagacaacacacagccaagcagaggtgcatcgac
atcgccgactacaaagaaagcttcaacaccatcagcaacatcgaggagatagcctacaac
gccatctctttcacctgggacatcaacgaggaggcaaagatctttatctcggtgaactgc
ttgagcacagacttctcctctcagaagggggtgaagggtctccccctaaacctgcagatc
gacacctacagctacaacaaccgcagcaacaagcccatccaccgcgcatactgccagatc
aaagtcttctgtgataaaggagccgagcgcaagatccgagatgaggagcgcaagcagtcg
cgcaggaagggaaaatgcaccgatgttaacaccggtctggctgccttcgtggacgtcaag
gtgcccctcctgcacaagcgcagtgatatcaccacctttaagatgatggcagacctggag
acacagcctgtcctcttcattcctgacatccactttaccaacttccagcgccaccccttc
tcttctgaagatgcagaagatggctctgggatgaagagattacccttctcagaggaggag
tttggatcacctcccaataagttggcccgggtggacgaaccaaagagagtcctgctgtac
gtacggaaggagacggaggaggtattcgatgccctcatgctaaagactccaacactgaaa
ggactggtggaagcgatttcagaaaagtatgacgtccctcttgagaaactggggaaggtc
tacaagaagtgcaaaaaagggatcttggtgcacatggacgacaacatcatcaagcattac
tccaacgaggacaccttccagatccatatggaggagatggggggcatggtgaagctcacc
ctcactgagatctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (2)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (1)   
   Pfam (1)   
All databases (25)   

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