KEGG   Alteromonas mediterranea 615: I633_08940
Entry
I633_08940        CDS       T02719                                 
Name
(GenBank) ribosomal large subunit pseudouridine synthase C
  KO
K06179  23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
Organism
amh  Alteromonas mediterranea 615
Brite
KEGG Orthology (KO) [BR:amh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:amh03009]
    I633_08940
Enzymes [BR:amh01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.24  23S rRNA pseudouridine955/2504/2580 synthase
     I633_08940
Ribosome biogenesis [BR:amh03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    I633_08940
SSDB
Motif
Pfam: PseudoU_synth_2 S4 GO-like_E_set
Other DBs
NCBI-ProteinID: AGP77813
UniProt: S5AMA3
Position
1804538..1805479
AA seq 313 aa
MKEEAPIKVRFVTVDADLAGQRIDNFLRTQLKGVPKSMIYRILRKGEVRVNKGRVKPEYK
LQADDVVRIPPVRVSEGAPAPSPKLDKIAALESHILFEDDRILVMNKPSGMAVHGGSGLS
FGLIEGLRALRPDAKFMELVHRLDRDTSGCILIAKKRSALRHMHEQLRTGKMDKRYNALV
AGEWPKNRFKVKAPLRKNVLQSGERMVSVSDDGKPSETRYRILEEYAGATLVEASPITGR
THQIRVHCLHAGHPIACDPKYGDADFDASMRQKGLNRLFLHARSISLLHPATEERVTFSA
PLDPTLSNTLKAL
NT seq 942 nt   +upstreamnt  +downstreamnt
atgaaagaagaagccccaataaaagtacgttttgtaacggttgacgccgatttggctggt
caacgtatcgataattttttgcgcacccagctaaagggcgtgccgaaaagcatgatttat
cgcattttgcgtaaaggcgaagtgcgtgtgaataaaggccgcgttaagcctgaatacaag
ttacaagctgatgacgttgttagaattccgcctgttcgtgtgtcggaaggggcgcccgcg
ccttcgccgaaactcgacaaaattgctgcgttagagtctcatattctgtttgaagacgat
cgtattctggtgatgaataaaccatcaggtatggccgtgcacggcggcagcggtttaagt
ttcggtttgatagaaggcttacgtgcgttacgccctgacgccaagtttatggaactggtc
catagattagacagagatacctcgggctgcatattaattgcaaaaaagcgttctgcactt
cgtcatatgcacgagcaacttcgcacgggaaaaatggacaaacgctacaacgcccttgtt
gcgggtgaatggcctaagaatcgttttaaggtgaaagcgccgcttcgcaagaatgtgctt
caatctggcgagcgaatggttagcgtgagcgacgatggtaagccctcagaaacgcgctac
cgcattttagaagagtatgcgggggcgacattggtagaagcttcgccgataacaggcaga
acacaccaaattcgcgttcattgcttacatgctggccatccgattgcctgcgaccctaaa
tacggtgatgcggattttgatgcttcaatgagacaaaaggggctaaatagattgttcctt
catgctcgcagcatctcgttgttgcatcctgcaacagaagaacgggtgacattttctgca
cctttagaccccacactttcaaatacgcttaaagcactgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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