KEGG T02719: I633

Alteromonas mediterranea 615: I633_20410

Entry

I633_20410        CDS       T02719

Name

(GenBank) transcriptional activator Fis

K03557

Fis family transcriptional regulator, factor for inversion stimulation protein

Organism

amh Alteromonas mediterranea 615

Brite

KEGG Orthology (KO) [BR:amh00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:amh03000]
    I633_20410
   03036 Chromosome and associated proteins [BR:amh03036]
    I633_20410
   03400 DNA repair and recombination proteins [BR:amh03400]
    I633_20410
Transcription factors [BR:amh03000]
Prokaryotic type
  Helix-turn-helix
   Other families
    I633_20410
Chromosome and associated proteins [BR:amh03036]
Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    I633_20410
DNA repair and recombination proteins [BR:amh03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      I633_20410

SSDB

Motif

Pfam:

HTH_8 DUF5805 DCAF17 Phage_NinH EnY2 HTH_28 DUF2106

Other DBs

NCBI-ProteinID:

AGP79609

UniProt:

S5AKI4

Position

4163235..4163528

AA seq 97 aa
MFDQNVTSPFTTTVTTPSQTQAQKPLRDSVKQAVNKYLKQLDNANIDNLYEMVLAEVEAP
LLEEVMTYTRGNQTRAAIMMGINRGTLRKKLKQYGMN

NT seq 294 nt +upstreamnt +downstreamnt
atgttcgatcaaaacgtgacttcaccttttactacgacagtaactacgccttcacaaacg
caagcgcaaaagccattgcgtgactctgtaaagcaagcggttaacaagtacctaaagcaa
ttagataacgcaaacatcgacaacctgtacgaaatggtactggctgaagtagaagcaccg
cttctagaagaagtcatgacttacactcgcggcaaccaaacacgcgccgctatcatgatg
ggcatcaaccgtggcacacttcgcaagaagcttaagcaatacggcatgaactaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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