KEGG   Actinosynnema mirum: Amir_7037
Entry
Amir_7037         CDS       T00957                                 
Name
(GenBank) apurinic endonuclease Apn1
  KO
K01151  deoxyribonuclease IV [EC:3.1.21.2]
Organism
ami  Actinosynnema mirum
Pathway
ami03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ami00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Amir_7037
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ami03400]
    Amir_7037
Enzymes [BR:ami01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.2  deoxyribonuclease IV
     Amir_7037
DNA repair and recombination proteins [BR:ami03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     Amir_7037
SSDB
Motif
Pfam: AP_endonuc_2 DNA_photolyase
Other DBs
NCBI-ProteinID: ACU40829
UniProt: C6WSF9
Position
complement(8178793..8179563)
AA seq 256 aa
MRIGAHVRDDDPLAAAAERGAEVVQFFLSDPQSWKAPGAHQHARALKDSELDVFVHAPYL
INVASLNNRVRIPSRKAVVQHAARAAEVGALGLIVHGGHVTKDDDPDDGIANWRKLFERQ
VDEGGFGVPILIENTAGGDNAMARSFDRLGRLWDAVGEFGAGFCLDTCHAFAAGEDLVGV
VERVKALTGRIDLVHLNNSRDEFGSSRDRHANVESGKIDPEQLVAVCASAGAPVLVETPG
DGQAADIAYLREHLAR
NT seq 771 nt   +upstreamnt  +downstreamnt
atgcgcatcggggctcacgtccgagacgacgatccgctcgccgccgccgccgagcgcggg
gccgaggtggtccagttcttcctcagcgacccgcagagctggaaggcccccggggcgcac
cagcacgcgcgggcgctcaaggactccgagctcgacgtcttcgtgcacgccccgtacctg
atcaacgtggcctcgctgaacaaccgcgtccgcatcccgtcccgcaaggcggtggtgcag
cacgcggcgcgcgcggccgaggtcggcgcgctggggctgatcgtgcacggcgggcacgtc
accaaggacgacgacccggacgacggcatcgccaactggcgcaagctgttcgagcggcag
gtcgacgagggcggcttcggggtgccgatcctgatcgagaacacggcgggcggcgacaac
gccatggcccgctcgttcgaccgcctcggcaggctgtgggacgcggtgggcgagttcggc
gcggggttctgcctggacacctgccacgcgttcgccgccggtgaggacctggtcggcgtc
gtggagcgggtcaaggcgctcaccggccggatcgacctggtgcacctgaacaactcccgc
gacgagttcggctcgtccagggaccggcacgcgaacgtcgaatcgggcaagatcgacccc
gagcagctcgtcgcggtgtgcgcctcggcgggcgcgccggtcctggtggagacgcccggt
gacggccaggcggccgacatcgcctacctccgcgagcacctggcccgatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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