KEGG   Actinosynnema mirum: Amir_7047
Entry
Amir_7047         CDS       T00957                                 
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
ami  Actinosynnema mirum
Pathway
ami03030  DNA replication
ami03430  Mismatch repair
ami03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ami00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Amir_7047
   03430 Mismatch repair
    Amir_7047
   03440 Homologous recombination
    Amir_7047
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ami03032]
    Amir_7047
   03400 DNA repair and recombination proteins [BR:ami03400]
    Amir_7047
Enzymes [BR:ami01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Amir_7047
DNA replication proteins [BR:ami03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Amir_7047
DNA repair and recombination proteins [BR:ami03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Amir_7047
SSDB
Motif
Pfam: RNase_T BRCT
Other DBs
NCBI-ProteinID: ACU40839
UniProt: C6WSG9
Position
8188123..8189271
AA seq 382 aa
MGYAVVDVETTGFRRSDRVVEVAVVQLDRDRRVTGEWCTLLNPGRDLGPQHVHRIRAADV
WGAPTFALAAGALARRLAGRVLVAHNLAFDARFLAAEFGRVGVDADFDGLCTMRLSGGRR
SLRDCCADAGVPLLDAHSALADAHAAAALFARLPEVPGAGALDLPPLGADVPEVRRGAAD
LAGGVLAGTAGAGPAGMAPAGTAPAGGVPASGLLAGAAPRSGALAGATRPVELSGGTLAG
GTRAGGTRSGEVLAGGALAGGSLGGPAIGVAATGVPGAGGPAAGGAGSAVRLARGDLVVF
TGQMDDARDVWVGRALGSGLRVNSGYVTRATALLVAADPFSLSTKARRARAYGVPIVSEG
AFAALLAGLADGLPDEPLGKIS
NT seq 1149 nt   +upstreamnt  +downstreamnt
gtgggttacgcggtggtcgacgtggagacgaccgggttccggcggtccgaccgggtggtc
gaggtggccgtcgtgcagctggaccgggaccggcgggtcaccggggagtggtgcacgctg
ctgaaccccggccgggacctcggaccgcagcacgtgcaccggatcagggcagccgacgtg
tggggcgcgccgacgttcgcgctggcggcgggggcgctcgcccggcggttggcgggtcgg
gtgctggtggcgcacaacctggcgttcgacgcgcgcttcctggccgccgagttcggccgg
gtcggggtggacgcggacttcgacgggctgtgcacgatgcggctgtcgggcgggcggcgg
tcgctgcgggactgctgcgccgacgccggggtgccgctgctggacgcgcactcggcgctg
gccgacgcgcacgcggcggcggcgctgttcgcgcggctgcccgaggtccccggcgcgggc
gcgctggacctgccgccgctgggcgcggacgtgcccgaggtgcggcggggcgccgccgac
ctggcgggtggggtgctggcggggacggcgggcgccggaccggcgggaatggcgcctgcg
ggaacggcgccggcgggcggagttcccgcgagcgggctgctggcgggcgccgccccgcgg
tcgggcgcgctggccggtgcgacgcgaccggtcgagctgtccggcgggactctggccggt
gggactcgggccggtgggacgcggtcgggcgaagtcctggcaggcggggctctggcgggt
gggtcgctcggcggtccggcgattggtgttgcggcgaccggtgttccgggtgccggcggt
ccggcagccggcggcgcggggtcggcggtgcggttggcgcggggcgacctggtggtgttc
accgggcagatggacgacgcgcgcgacgtgtgggtgggccgggcgctgggctcggggctg
cgggtgaactccggttacgtcacgcgcgccacggcgctgctggtcgcggccgacccgttc
tccctgtcgaccaaggcgaggcgggcccgcgcgtacggggtgccgatcgtgtccgagggc
gcgttcgccgcgctgctcgccggtctcgcggacgggctccccgacgagccgctgggcaag
atcagctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (27)   

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