KEGG   Aminobacter sp. MSH1: CO731_00251
Entry
CO731_00251       CDS       T05420                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
amih  Aminobacter sp. MSH1
Pathway
amih03030  DNA replication
amih03410  Base excision repair
amih03420  Nucleotide excision repair
amih03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:amih00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CO731_00251 (polA)
   03410 Base excision repair
    CO731_00251 (polA)
   03420 Nucleotide excision repair
    CO731_00251 (polA)
   03440 Homologous recombination
    CO731_00251 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:amih03032]
    CO731_00251 (polA)
   03400 DNA repair and recombination proteins [BR:amih03400]
    CO731_00251 (polA)
Enzymes [BR:amih01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CO731_00251 (polA)
DNA replication proteins [BR:amih03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     CO731_00251 (polA)
DNA repair and recombination proteins [BR:amih03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     CO731_00251 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CO731_00251 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 HHH_5 DprA_N HHH_2 HHH IMS_HHH POR
Other DBs
NCBI-ProteinID: AWC20810
UniProt: A0A2S0XCP9
Position
241692..244670
AA seq 992 aa
MKKGDHLFLVDGSGYIFRAYHALPPLTRKSDGLPVGAVSGFCNMLWKLMLDARNTEAGVV
PTHFAVIFDYSSKTFRNELYPEYKANRSAPPEDLIPQFGLIRQATKAFELPCIEMEGFEA
DDLIATYARLACEAGGDTTIVSSDKDLMQLVGPSVSMYDPMKDRQINVPEVVEKWGVQPE
KMIDLQALTGDSVDNVPGVPGIGPKTAAQLLEQFGDLDTLLARAAEIKQDKRRQSIIDNA
DKARISRELVRLKVDVPVTDVLEDFVLQPPNGPKLIGFLKTMEFTSLTRRVAEATGTEAG
EVEAVPVSVQWGADAHGPDVGSGAAPAATAAAPAARANGGNAAAAAPSSASAESGNVHDT
PTALANKIAERAASQKFDHAAYVTIRDLATLNNWIAEARQAGVVAFDTKTTSLDPMQAEL
VGFSLAMAPGRAAYVPLAHKSGRGDLLGGGLVENQVPVRDAIAALKALLEDASVLKVAQN
LKYDLVVLDRHGIDVHSFDDTMLLSYVLDGGTNGGHGTDSLSEKWLGHTPIPFKEIAGSG
RNVVGFDQVDIDKATAYAAEDADVALRLWRVLKPRLAAKGVVSVYERLERPLVPVLARME
QRGISVDRQILSRLSGELAQGAARLEDEINAIAGERFNIGSPKQLGDILFGRMGLPGGTK
TKTGQWSTSAQVLEDLAAEGHELPRKIVDWRQMTKLKSTYTDALPGFINPETKRVHTSYA
LAATTTGRLSSSDPNLQNIPIRTTEGRKIRTAFIADKGNKLISADYSQIELRVLAHVADI
GQLKQAFADGVDIHAMTASEMFSVPVEGMPSEIRRRAKAINFGIIYGISAFGLANQLSIP
REEASDYIRKYFERFPGIRAYMDETKAFCRENGYVETIFGRRIHYPEIRSSNPSVRAFNE
RASINARLQGTAADIIRRAMIRMEDALIAARLSARMLLQVHDELIFETVEHEVEATIPVV
RHVMENAAMPAVSMSVPLHVDAHGANSWDEAH
NT seq 2979 nt   +upstreamnt  +downstreamnt
atgaaaaaaggcgatcatctcttccttgtcgacggctccggctacatcttccgcgcctat
catgcgctgccgccgctgacccgcaagtccgacggccttccggtcggtgccgtctcaggt
ttctgcaacatgttgtggaagctgatgctcgacgcacgcaacaccgaagctggggtcgtg
ccgacgcatttcgcggtcatcttcgactattcctcgaagaccttccgcaacgagctctac
cccgagtacaaggccaaccgctcggcgccgccggaagacctgatcccgcaattcggcctg
atcaggcaggcgaccaaggcgttcgagctgccctgcatcgagatggagggtttcgaggcc
gacgatttgatcgccacctatgcccggctcgcctgcgaggccggcggcgacaccaccatc
gtctcctccgacaaggacctgatgcagctcgtcggtcccagcgtgtcgatgtacgacccg
atgaaggatcgccagatcaatgtccccgaggtcgtcgagaagtggggcgtgcagcccgag
aagatgatcgacctgcaggcgctgaccggcgactcggtcgacaacgttccgggcgtgccc
ggcatcggcccgaagacggcggcacagctgctcgaacagttcggcgacctcgacacgctg
ctcgcgcgcgccgccgagatcaagcaggacaagcgccgccagtcgatcatcgacaacgcc
gacaaggcgcgcatttcgcgcgagctggtgcggctcaaggtcgacgtgccggtgaccgac
gtgctcgaagacttcgtgctgcagccgcccaacgggccgaagctgatcggcttcctcaag
acgatggaattcacctcgctgacgcgccgcgtcgccgaggccaccggcacggaggccggc
gaggtcgaggctgtgcctgtcagcgtgcagtggggcgctgacgcgcatgggcctgacgtc
ggttcgggagcggcaccggcggcgaccgccgcggctcctgcagcgcgtgcgaacggaggc
aacgctgcagctgcagccccctcgtccgcctctgccgaaagcggcaacgtgcacgacact
cccaccgccctcgccaacaagatcgccgaacgggcagcctcgcaaaagttcgaccatgcc
gcctatgtcaccatccgcgacctggcgaccctgaacaactggatcgccgaggcaagacag
gccggcgtcgtcgccttcgacaccaaaaccacctcgctcgacccgatgcaggccgaactg
gtcggcttttcgctggcaatggcacccggtcgcgccgcctatgtgccgctggcccacaag
agcggccgcggcgatcttctcggcggcggactggtcgagaaccaggtacccgtgcgcgac
gcgatcgccgcactcaaggcgctgctcgaagacgcctccgtgctcaaggtggcgcagaac
ctgaaatacgatctcgtggtgctggaccggcacggcatcgacgtgcactcgttcgacgac
acgatgctgttgtcctacgtgctcgacggcggcaccaatggcggccacggcacggattcc
ctgtcggagaagtggctcggccacacgccgatcccgttcaaggagattgccggttcgggc
aggaatgtcgtcggcttcgaccaggtcgacatcgacaaggcgacggcctatgcggccgag
gacgccgacgtggcgctgcggctgtggcgcgtgctcaagccgcgcctcgctgccaagggc
gtggtctcggtctacgagcggctggaacggccgctggtgccggtgctggcgcgcatggaa
cagcgcggcatctcggtcgaccgccagatcctgtcgcggctttcgggcgaactggcccag
ggtgctgcccgtctcgaagacgaaatcaacgcaatcgccggcgagcgcttcaacatcggc
tcgcccaagcagctcggcgacatcctgttcggccgcatgggcctgcccggcggaaccaag
accaagacgggccagtggtcgacttcggcgcaggtgctggaagacctcgccgccgaaggc
cacgagctgccgcgcaagatcgtcgactggcgccagatgaccaagctcaagtcgacctac
accgacgccctgcccggcttcatcaatcccgagaccaagcgcgtccacacctcctacgcg
ctcgccgccaccacgacgggacggctgtcgtcgtcggacccgaacctgcagaacatcccg
atccgcaccaccgaaggccgcaagatccgcactgccttcattgccgacaagggcaacaag
ctgatctcggcagactacagccagatcgagctgcgcgtgcttgcccatgtcgccgacatc
ggccagctcaagcaggccttcgccgacggcgtcgacatccatgcgatgacggcgtccgag
atgttctcggttccggtggaaggcatgccgtcggagatccgccgtcgggccaaggcgatc
aatttcggcatcatctacggcatctccgccttcggcctcgccaaccagctgtcgatcccg
cgcgaggaagcctccgactacatcaggaagtatttcgagcgcttccccggtatccgcgcc
tacatggacgagaccaaggcgttctgccgcgagaacggctatgtcgagaccatcttcggc
cggcgcatccactatccggaaatccggtcgtccaatccctcggtgcgcgccttcaacgaa
cgcgcctcgatcaacgcacgcctgcagggtacagcagccgacatcatccgccgcgccatg
atccgcatggaggacgctctcatcgccgccagactgtcggctcggatgctgctgcaggtg
cacgacgaactgattttcgaaaccgtcgagcacgaggtcgaggcaaccatccccgtcgtc
cgccatgtcatggaaaacgccgccatgccggcggtgtcgatgtcggtgccgctgcatgtc
gacgcccatggcgccaacagctgggacgaggcgcattga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (24)   

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