KEGG   Aminobacter sp. MSH1: CO731_01563
Entry
CO731_01563       CDS       T05420                                 
Symbol
sigM_1
Name
(GenBank) RNA polymerase sigma factor SigM
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
amih  Aminobacter sp. MSH1
Brite
KEGG Orthology (KO) [BR:amih00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:amih03021]
    CO731_01563 (sigM_1)
Transcription machinery [BR:amih03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CO731_01563 (sigM_1)
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF HTH_23 HTH_28 GerE DUF134
Other DBs
NCBI-ProteinID: AWC22107
UniProt: A0A2S0XGH3
Position
1558546..1559094
AA seq 182 aa
MAASLGFKGDLLAAIPGLRAFAMSLSQNADRADDLVQETLVKAWDKQSSFQPGTNLKAWL
FTILRNEFYSQMRKRGREVQDSDGLLTARLAVHPSQPGRLDLDDFRKALEQLPEDQREAI
ILIGASGFSYEEAAEICGCAVGTIKSRVSRARNRLQEILDISGEADYGPDAIAAQVMGST
VS
NT seq 549 nt   +upstreamnt  +downstreamnt
atggcagcatcccttggtttcaaaggcgacttgctcgcggcgattcctggcctgcgggcc
tttgccatgtcgctgtcgcagaacgccgacagggcggacgaccttgtccaggaaacgctg
gtcaaggcgtgggacaagcagtcgagcttccagcccggcaccaatctgaaggcctggctg
ttcaccatcctgcgcaacgagttctattcgcagatgcgcaagcgcggacgcgaggtgcaa
gacagcgacggtctcctgacggcgcggctcgcggtgcatccgagccagcccggacggctc
gacctcgacgacttccgcaaggcgctggagcagcttcccgaagaccagcgcgaagcgatc
atcctgattggcgcgtcgggcttctcctatgaggaggcggcggaaatctgcggttgcgcc
gtgggcacgatcaagagccgcgtcagccgcgcccgcaacaggctgcaggagatcctcgat
atctcgggcgaagccgactacgggccggacgcgatcgcggcccaggtcatggggtcaacc
gtcagctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (15)   

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