KEGG T05420: CO731

Aminobacter sp. MSH1: CO731_04765

Entry

CO731_04765       CDS       T05420

Symbol

xseA

Name

(GenBank) Exodeoxyribonuclease 7 large subunit

K03601

exodeoxyribonuclease VII large subunit [EC:3.1.11.6]

Organism

amih Aminobacter sp. MSH1

Pathway

amih03430

Mismatch repair

Brite

KEGG Orthology (KO) [BR:amih00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    CO731_04765 (xseA)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:amih03400]
    CO731_04765 (xseA)
Enzymes [BR:amih01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     CO731_04765 (xseA)
DNA repair and recombination proteins [BR:amih03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     CO731_04765 (xseA)

SSDB

Motif

Pfam:

Exonuc_VII_L tRNA_anti_2 tRNA_anti-codon Gly_transporter RecJ_OB

Other DBs

NCBI-ProteinID:

AWC25271

UniProt:

A0A2S0XQL3

Position

4845102..4846688

AA seq 528 aa
MPALNHAMSEVATESRTNAAEYTVSEISGALKRTVEDTFGNVRVRGEISGYRGPHSSGHA
YFSLKDDRARIEAVVWKGTMSRLKFRPEEGMEVIATGKLTTYPGSSKYQIVIDNLEPAGA
GALMALLEERKRRLAAEGLFDDSRKQLLPFMPLVIGVVTSPTGAVIRDIIHRIKDRFPLH
VLVWPVRVQGETSGAEVAAAVNGFNELPEEGSFRRPDLLIVARGGGSLEDLWGFNDEALI
RAVAASHIPVISAVGHETDWTLIDLAADRRAPTPTGAAELAVPVKAELEATLANLGARLR
GAVSRMIDRRSQAVRAAARALPTPDQLLALPRRRFDEATSRLGRALTVTTERKRARLSAV
RLSPATLSRRIAETRRHLDRDMLRANAALRSLVRERHIRFDRTRARLSPEPLARRQEACR
LQVTSLERRGALAVGRRLERARTQLSQADRLLATLSHKAVLARGFALVRDADGAVLKRAI
EISAGAALSIEFADGTANAVATSGDAKPRPPAKPVSKVKEPGNQGSLF

NT seq 1587 nt +upstreamnt +downstreamnt
atgccggccctcaatcatgccatgagcgaagttgccaccgaatcacgaaccaacgctgcg
gaatataccgtcagcgaaatttccggcgcgctgaagcgcacggtcgaggacaccttcggc
aatgtgcgcgtgcgcggcgaaatctccggctatcgcggaccgcattcgtcgggccatgcc
tatttctcgctgaaggacgaccgcgcccgcatcgaggcggtggtgtggaaaggcacgatg
agccggctgaaattccgtcccgaggaagggatggaggtcatcgccaccggcaaactgacc
acctatcccggctcgtcaaaataccagatcgtcatcgacaatctcgaacctgcgggcgcc
ggcgcgctgatggcgctgctggaggaacgcaagcgcaggcttgccgccgaaggactgttc
gacgacagccgcaagcagctgctgccgttcatgccgctggtcatcggcgtcgtcacttct
ccgaccggcgctgtcatccgcgacatcatccaccgcatcaaggatcgctttccgctgcat
gtgctggtctggccggtgcgcgtgcagggcgagacgtcaggcgccgaggtggcggcggct
gtcaacggattcaacgaactgcccgaagaaggcagcttccgtcgtcctgaccttctgatc
gtagcgcgtggcggcggcagcctcgaagacctctggggcttcaacgacgaggcgctgatc
cgcgcggtggcggcctcgcatattcccgtcatttcagccgtcggccacgagaccgactgg
acgctgatcgaccttgccgccgacaggcgggcaccgaccccgacaggtgccgccgagctc
gcggtaccggtgaaggccgaactcgaggcgacactcgccaatcttggcgcgcggctgcgc
ggcgccgtctcgcgcatgatcgaccgacgcagccaggcggtacgcgccgcggcacgcgcc
ctgccgacgcccgaccagttgctggcgctgccccgcaggcgcttcgacgaggccaccagc
cggcttggcagggcgctgacggtcaccaccgaacgcaagcgcgcgcggctttcagctgtg
cgactgtcgccggcgaccctgtcgcggcgcatcgccgagacgcgccgccacctcgaccgc
gacatgctgcgggccaacgcggccctgcgctccctggtgcgcgagcggcatatccgcttc
gaccgtaccagggcacggctgtctcccgaaccgctggccaggcggcaggaggcctgccgc
ctgcaggtcaccagcctggaacggcgtggcgcattggccgttggccgcaggctcgaacgc
gcgcggacgcagctctcgcaggcagaccggttgctggcgacgctttcgcacaaggcggtg
ctggcgcgcggttttgcgctcgtgcgcgatgccgacggtgcggtgctgaagcgtgcaatc
gagatttcggcaggggccgcgctgtcgatcgagtttgccgacggcacggccaatgccgtc
gccaccagcggcgatgccaagccacgaccgccggccaagccggtgagcaaggtcaaggaa
cccggcaaccagggcagcctgttttag

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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