KEGG   Acropora millepora: 114956663
Entry
114956663         CDS       T06134                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA ligase 1-like
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
amil  Acropora millepora
Pathway
amil03030  DNA replication
amil03410  Base excision repair
amil03420  Nucleotide excision repair
amil03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:amil00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    114956663
   03410 Base excision repair
    114956663
   03420 Nucleotide excision repair
    114956663
   03430 Mismatch repair
    114956663
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:amil03032]
    114956663
   03400 DNA repair and recombination proteins [BR:amil03400]
    114956663
Enzymes [BR:amil01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     114956663
    6.5.1.6  DNA ligase (ATP or NAD+)
     114956663
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     114956663
DNA replication proteins [BR:amil03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    114956663
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     114956663
DNA repair and recombination proteins [BR:amil03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     114956663
   NER (nucleotide excision repair)
    Other NER factors
     114956663
   MMR (mismatch excision repair)
    Other MMR factors
     114956663
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Other DBs
NCBI-GeneID: 114956663
NCBI-ProteinID: XP_029189676
Position
Unknown
AA seq 1041 aa
MIVKFLARRCCLVNRSIFHDIWRSFYQTNTSMAQRGITAFFSPTANVKTKSKKYGRNNKD
ISSTSNLKTKVETPVKTGLQSVEHDSPPVKKSRQQKARRILDDSSDEENCSGVEDKLSGK
HNGHVLEKKDTAVQKPTSSLKNGEMEDSKEKLKLIEVTSPANETTLVPKRKTARKPTKRK
ASSDHLSSDEGKSVKRVKSETASLQNGQVGDSNTEEKEAQEETAENSIFEARALKSEPEK
NSQMEIENSAFDEAVDKNEKMKIEDIDEGCEDNEKTIPENSSQEDSKQAEKPEERVTSKC
VNGDNSLVKKKEDGKQNRGENVKSEKKPKEAFSDFFSPKRSKKANEKEEKPVEKSKTKQL
LQPSKKTSITPDKAMDEKSTVVVNPTEYSPDQNNYDPIKHACWKHGEKVPYLAVARTFQI
IEDTSARLKITSTLSNFFRSVIVLSPDDLLPCVYLCLNKLAPAYEGMELGVGDNVLMKAV
AESTGRSLQQIKVDVGEKGDLGIVAESCRGKQRTMFAPPKLMAAGVFTKLQDIAKMTGHS
SMLRKTEKIKGMFVACRDSEARYLIRSLGGKLRIGLAEQSVLTALGHAAFLTPPCKEFPP
AVIDNAKNFSGEELKKKQDEAAMIVKTCYCEMPNYNKLIPSLLEHGLEALPRYCHLTPGI
PLKPMLAHPSKGVEEVFKRFEKAEFTCEFKYDGERAQIHVLDNGEINIYSRNQENNTSKY
PDIIARMPKVLGEGVKSCIIDTEAVAWDRDKKQILPFQVLSTRKRKDADASEIKVQVCVY
AFDLLYLNGKSFVKEAFRVRREALRSSFTEVEGEFMFAQSSDSVNTDDIAEFLDDSIKGN
CEGLMVKTLEVDATYEIAKRSHNWLKLKKDYLAGVGDTLDVVVIGGYLGKGKRTGSYGGY
LLACYDPENEEFQCICKIGTGFTDELLDQHHQFFKDHVISQPKAYYRYDDGLAPDHWFDP
VQVWEIRAADLSISPVHKAAVGLVDPVKGISLRFPRFLRIRDDKQXEQATDSSQVAEMYR
SQESVKNNTNPPSVPDADDFY
NT seq 3126 nt   +upstreamnt  +downstreamnt
atgattgtaaagtttttagcgcgaagatgttgtttagtaaatcgaagtatattccatgat
atttggagatctttctaccaaacaaacacgtcaatggcccaacgaggaatcaccgctttc
ttttccccaactgcgaatgtcaaaacaaaaagcaaaaagtatggaaggaataataaagat
atatcaagcaccagtaatttgaaaacaaaagtggaaaccccagtaaagacaggtttacaa
tctgttgaacatgactctcctccagtcaagaagtccaggcagcagaaagcacgacggata
cttgatgatagcagtgatgaagagaattgttccggagtagaagataagctttcaggaaaa
cacaatggccatgtgttggagaaaaaagatactgcagtgcaaaaaccaacaagttcatta
aagaatggtgaaatggaggatagtaaagagaaactaaaactcatagaggttacatctcca
gctaatgaaactactcttgtaccaaaacgaaaaacagctagaaaaccaacaaagaggaag
gcttccagtgaccatttatccagtgatgaaggaaagagtgtcaaacgggtaaagtcagaa
acagcttccctacaaaatggtcaggttggagattcgaataccgaagagaaggaagctcag
gaagaaacagctgaaaactcaatctttgaagctagagctctgaaatccgaacctgaaaaa
aatagtcagatggaaatagaaaacagcgcatttgatgaggctgtcgacaagaatgagaaa
atgaagatagaagacatcgatgaaggttgtgaagacaatgaaaaaactatcccagagaat
agcagtcaggaagactcaaaacaagctgaaaagccagaggagcgtgttactagcaagtgt
gttaatggggataattcgcttgtaaagaaaaaggaggatgggaaacagaatcgaggtgaa
aatgtcaaaagtgaaaagaaacctaaagaggcattcagtgactttttctctccaaagagg
tccaaaaaggctaatgagaaagaggaaaaacctgttgaaaagagtaaaaccaagcaactt
ttgcaaccatcaaagaagacaagcattactccagataaagctatggacgagaagagcaca
gttgtggtgaatcccacagaatattcaccagatcagaataactatgaccctatcaaacat
gcttgttggaaacatggggagaaggttccataccttgctgtagccagaacatttcagatc
atagaagatacttctgcgcggctgaagattacatccacactcagcaacttcttccgttca
gtgatagttctgtcacctgatgatctactcccctgtgtttatctttgtctcaacaagctg
gctcctgcatacgaaggaatggaacttggtgttggagacaatgttctgatgaaagcagtt
gcagagtcaacagggaggagtttacaacagatcaaggttgatgttggtgaaaagggagac
ttggggattgttgcagagtcttgtcgcggtaaacaacgcaccatgtttgcaccaccaaag
cttatggcagcaggtgttttcaccaagttgcaggacattgcaaagatgaccggacatagt
tcaatgttgagaaagacagagaaaataaaagggatgtttgtggcctgccgagattccgaa
gcaagatacttgatcagatccttaggggggaagttgaggattggtcttgcggaacagtca
gttttaacagccttgggacatgcagcttttctcacaccaccatgcaaagagtttcctccc
gcggtcattgataatgctaagaatttctccggagaagaattaaagaagaaacaagatgaa
gctgctatgatagtcaagacctgctactgtgaaatgccaaactacaataaactgattccg
tcacttttggagcacggcttggaagcgctaccccgttactgccatttgacacccggtatc
cctctgaaaccaatgttggcacacccttccaaaggagtggaagaagtgttcaaacgattt
gaaaaagcggaattcacttgcgagtttaagtacgatggagaacgagcgcagattcatgtg
ctggacaacggagaaattaacatttacagcagaaaccaagagaataatacctccaagtat
cctgacattattgcacgaatgccaaaggttttgggagagggcgtcaagtcgtgcatcatt
gataccgaggctgtcgcatgggatcgagacaagaagcagattttgccctttcaagttctc
agcacaagaaaaagaaaggatgctgatgcctcggaaataaaagttcaagtttgcgtgtat
gcatttgatctcttgtacctcaacggaaaatcgtttgtgaaggaagctttccgtgttcgc
agagaggcgctaagatcttctttcactgaggtcgaaggggaattcatgtttgctcagagt
tctgactccgtgaacacggacgacatagcagaatttttagatgattctatcaaaggaaac
tgcgaaggactgatggtaaaaacgctcgaagtagacgccacttacgaaattgctaaacgg
tcgcataactggttgaaattgaagaaggactatttggctggtgtaggagatacgctggat
gtggtagtgattggcgggtatcttggtaaaggtaaaaggactgggtcatacggaggctat
ctcttagcgtgttacgatccagaaaacgaagaattccagtgcatctgtaagattggaact
ggttttacggacgaacttctggaccagcatcaccagttcttcaaggatcacgtgatttca
caaccgaaggcgtactatcgctatgacgacggcttggcgcctgatcattggttcgatccc
gtgcaggtgtgggagataagagccgcggatctttcaatttctcctgttcataaggcagcg
gtcggactggttgatcccgtcaagggaatttcgctacgatttccacgcttccttcgaatc
cgtgacgacaaacagcangagcaagccacagacagctcgcaagtagcggaaatgtacaga
agccaagaaagtgtgaaaaataacaccaaccctccttcagtccctgatgcagacgatttt
tactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (7)   
   KEGG ENZYME (3)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (37)   

Download RDF
DBGET integrated database retrieval system