KEGG   Acropora millepora: 114972697
Entry
114972697         CDS       T06134                                 
Name
(RefSeq) U5 small nuclear ribonucleoprotein 200 kDa helicase-like
  KO
K12854  pre-mRNA-splicing helicase BRR2 [EC:5.6.2.6]
Organism
amil  Acropora millepora
Pathway
amil03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:amil00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    114972697
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:amil03041]
    114972697
Enzymes [BR:amil01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     114972697
Spliceosome [BR:amil03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    114972697
 Complex C
   U5 SnRNP specific factors
    114972697
SSDB
Motif
Pfam: Sec63 DEAD Helicase_PWI ResIII Helicase_C BRR2_plug AAA_22 AAA_30 SWI2_SNF2 nSTAND3 T2SSE SLFN-g3_helicase
Other DBs
NCBI-GeneID: 114972697
NCBI-ProteinID: XP_029208986
Position
Unknown
AA seq 2137 aa
MADATARSLQYEYKANSNLVLQADRSLIERRGRDEATGEVVSLVGHLGGIKMGDKYQRTK
PPASEEKKAKRQKLAEREEFTKSKTSSSLLSEDSSDLAGVRYRPKTRETKSTYEVLLSFI
QAAIGDQPRDILCGAADEVLVALKDDKMKDKERQKEIVSLLGAMPDERYALLVNLGKKIT
DYSVDRSLLNDDDVIDETYGVAVQFDEEEEEEDKDFDEVMDESGDEAEGVEADTKMTLQG
GLEDERSQRSGDNLHPRDIDAFWLQRELNKYYADAEASRAKTEEVLEILKSAKDERELEN
KMMLLLGHDKFSFIRLLRKNKNMVLYCTLLATAQSAKDKKEIEEKMSADPDLAPILHALT
ETEQGDLIQEERARKAANRKARIAADLDAVESDQTRGSRTILDLEDLSFKDGSHLMANKR
CQLPDGSFRKQRKGYEEVHVPALKPKPYETGEERVPITSLPKFAQPAFEGYDALNRIQSR
LCNSALSSDENLLLCAPTGAGKTNVALLTILREIGKHINLDGTINLEEFKAIYVAPMKSL
VQEMVANFSKRLGTYGITVSELTGDHNLNKEQITSTQVIVCTPEKWDIITRKGGERTFTQ
LVRLIIIDEIHLLHDDRGPVLESLVSRTIRQIETTQEMVRLVGLSATLPNYEDVATFMRV
NPAKGLFFFDNSFRPVPLEQQYIGITEKKPMKRLQVMNDIVYEKVIEHAGKNQVLIFVHS
RKETSKTARAIRDLCLERDTLGHFLREDSASTEVLRTEAEQAVNLELKDLLPYGFAIHHA
GMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGAL
DVMQMLGRAGRPQYDTKGEGILITSHSELQYYLSLMNQQLPIESQFIGKLADNLNAEIVL
GTVQNAKEAVHWLGYTYLYIRMLRNPTLYGITHDEIEKDSLLEQRRADLIHSAATLLDKN
NLVKYDKKSGNFQVTELGRIASHYYCTQETIATYNNLLKPTLSEIELFRVFSLSSEFKYI
TVREEEKLELNKLLERVPIPVKESIEEPSAKVNVLLQAYISHLKLEGFALMSDMVYVTQS
SGRLMRAIFEIVLNRGWAQLADKSVNLCKMIDKRMWLSMSPLRQFKKIPMEVVKRIEKKE
FPWERYYDLGATEIGELVHMPKMGKTLYKFVHQLPKMELATHIQPITRSTLSVELVITPD
FQWDEKIHGNSEAMWIFVEDVDSEIILHHEYFLLKSKFASDEHTLKFFVPVFEPLPPQYF
IRIVSDKWLGSETQLPVSFRHLILPEKNPPPTELLDLQPLPVSALRNPAFESLYKDKFPY
FNPIQTQVFNTLCNSDENVLIGAPTGSGKTICAEFAVLRLLQQISDCRCVYVTPLQSLAD
QVYADWQSKFAVQLGKNVVMLTGETSADLKLLAKGNVIVSTPEQWDVLSRRWKQRKNVQN
VHLFILDEAHLIGGESGPVMEVIGSRMRYISSQIERNIRIVALSSSLSNAKDVSQWLGVS
ATGLFNFHPNVRPIPLELHIQGFNITHTASRLIAMTKPTYQAIVKHSPKKPVIVFVPSRR
QTKLAALDLLTFSGAENDAQRFLHCTEEDLQPFIKRLNDKTLKETVGYGVAYLHEGLSDT
ETKIVEQLFNSGAIQVVIVSRNLSWAINMSAHLVIIMDTQFYEGKIHAYVDYPVTDVLQM
IGRANRPLLDDSGKAVILCQASKKEYFKKFLYEPLPIESHLDHCLHDHFNAEVVTKTVEN
KQDAVDYLTWTFLYRRMTQNPNYYNLQGVTHRHLSDHMSDMVENTLNDLQQSKCVSIEDE
MDVSPLNLGMIAAYYYINYTTIELFSVSLNAKTKLRGLIEIISSANEYDRLPIRHHEDTT
LKQLMNRVPHKVTNPKYNDPHVKTNLLIQAHMSRMQLSAEMQSDTETILGKAMRLVQACV
DVLSSNGWLSPALAAMELAQMITQAMWSKDSYLKQIPHFTAEVVKRCVDKDVESVFDIMD
LEDEERNKLLRLDDNQMQDVARFCNRYPNIELSFEVNDEDNISAGSPVNVIVDLDREDEQ
PGPVIAPFFPQKREEGWWLVVGDTKNNGLISIKRLTLQQKAKVKLDFVAPSSPGTYSYTL
FFMCDSYMGCDQEYPFKINVGEAASGDEESGDSDADD
NT seq 6414 nt   +upstreamnt  +downstreamnt
atggcggatgccacggccaggtcactgcagtatgagtataaagcgaactccaatcttgtt
ttgcaagctgaccgctccctgatcgagcgccgtggccgtgatgaggctacaggtgaggtt
gtatcccttgtcggtcatttgggaggaattaagatgggtgacaagtaccagagaacaaag
ccgccagcttctgaagagaagaaagctaaacgacagaagttagcagagcgagaagaattc
accaagagtaaaactagcagtagccttttatctgaagattcatccgacttggctggagtg
aggtacagacccaagaccagggaaacaaaatctacctatgaagttcttctcagttttatt
caagcggccattggagatcagcctcgagatatattgtgtggagctgcagatgaagtcctt
gttgctttaaaggatgataagatgaaggataaggagcgccagaaagagattgtatctttg
cttggagcaatgccagatgagagatatgcattgctggtgaatttagggaagaagatcaca
gattactctgttgacagaagcttgttaaatgatgatgatgtgattgatgagacttatgga
gtggctgtgcagtttgacgaagaagaagaagaggaggacaaagactttgacgaggtcatg
gatgaatctggtgatgaagctgagggggtagaggcagacacaaaaatgacccttcagggt
gggctggaagatgaacgatctcaaagatcaggtgataatctccatccacgagacattgat
gctttctggttgcaaagagagctgaacaaatattacgcagatgcggaggcttcaagagct
aagacagaagaagtacttgagattctaaagagtgccaaggatgagagagaacttgagaat
aaaatgatgttgctcctggggcatgacaaattctcctttattcgactcttacgtaaaaac
aagaacatggtgctgtactgcacattgcttgcaacagcacaaagtgccaaggataagaaa
gagattgaagagaaaatgagtgcagaccctgacttagcacctatcttgcatgctctgaca
gagactgaacaaggggatttgattcaggaagaaagagcacggaaagcagccaataggaaa
gctagaattgcagctgatttggatgctgttgagtctgaccagactcgaggtagtaggact
attctggacctagaagatctctccttcaaagatggcagccatcttatggcaaacaagaga
tgtcagcttcctgatggctcattcagaaagcagaggaagggttatgaagaagttcatgta
ccagctttaaagccgaaaccatatgagacaggagaggaacgtgtgccaatcaccagcttg
cccaagtttgctcagccagcctttgaaggttacgatgctcttaacaggatccagagcaga
ctttgtaattctgctcttagcagtgatgaaaaccttttgctttgtgctccaactggtgcc
ggtaaaacaaatgtggctttactaacaatattgagagagattggaaagcatataaacctt
gacgggaccatcaatttggaagagtttaaagccatttatgtagctcccatgaaatctctc
gtgcaggagatggttgccaatttctctaagagacttggtacatatgggataactgtttca
gaattgacaggagaccacaacttgaacaaagaacagattaccagtactcaagtgattgtc
tgtactcccgaaaagtgggacataattacacgcaaaggaggcgagagaactttcacccag
cttgttcgactcatcatcattgatgaaattcatctccttcacgatgaccgtgggcctgtg
ctcgagtcgctggtctcacgcacgatccggcagattgaaacaacgcaagaaatggttcga
ctggttggtttgagtgcaaccttaccaaattatgaagatgttgcaaccttcatgcgtgtt
aaccctgccaagggcctctttttctttgacaacagttttagaccagtgccactggaacag
cagtatattggcattacagaaaagaaaccaatgaaaagactacaggtgatgaatgatatt
gtgtatgagaaagtcattgaacatgctggcaagaatcaagtgctgatttttgtacattca
agaaaagaaacaagcaaaactgcccgagccatcagggatttgtgtcttgaaagagacacc
ttgggccatttcttgagggaggattcagcaagcactgaggtgttaagaactgaggctgag
caagctgttaatctggaattgaaagatctccttccctatggctttgctatccatcatgct
ggcatgacaagggttgacagaacattagtggaagatctctttgctgacagacacatacag
gttctcgtttccaccgcaacattggcatggggtgtgaacttgcctgcccacactgtcatc
attaaaggaacacagatttacaaccctgagaaaggtcgctgggtggagcttggtgcattg
gatgttatgcagatgcttggacgtgctggtcgtcctcagtatgacacaaagggagaaggc
attttgataacaagccacagcgagctgcagtattacctctcacttatgaatcaacagctc
cccattgaaagtcagtttattggcaagctggctgacaatctcaatgctgaaattgtgttg
ggaactgtacagaatgcaaaggaagcagttcattggcttggttatacttacctttacatc
cgaatgctgagaaaccctactttgtatggtataacccatgatgaaattgagaaagattct
cttcttgagcagcgtagagcagatcttattcactccgctgccacactactggacaagaat
aatcttgtaaaatatgacaagaaatcaggaaacttccaggtgacagagttgggtcgcatt
gccagccactattactgcactcaagagaccattgccacatacaacaaccttttaaaacca
acgctgagcgagattgaactgtttagagttttctcattgtcatctgaattcaaatacatc
actgtcagagaggaagagaaacttgagttgaacaagttgctggagcgagttcccattcca
gtcaaggagagcattgaggaaccaagtgctaaggtcaatgttcttcttcaggcttacatt
tctcatttgaagctggagggatttgccttgatgtctgacatggtttatgtcacacagtcc
tcaggtcggctgatgagggcaatctttgaaattgtgctaaaccggggctgggctcagtta
gctgataagagtgttaacttgtgcaagatgattgacaagagaatgtggctttcaatgagt
ccattacgtcagttcaagaagatccccatggaagtcgtgaagagaatcgagaaaaaagaa
tttccatgggagaggtactatgacttgggtgctacagagattggggaacttgtgcacatg
cccaaaatgggaaagacgctgtacaagtttgtacatcaactgccaaagatggagctagcc
acacacattcagcctatcacaagatccactctaagtgtcgagttggtgattacacccgat
tttcagtgggatgaaaaaattcacggcaactcggaagcaatgtggatatttgtagaagat
gtagacagtgaaatcatcctgcatcatgagtattttctgctgaagagcaagtttgcatct
gatgagcatactttgaagttctttgttcctgtgtttgagcctcttccgcctcagtatttc
attaggattgtttccgacaagtggctaggatctgaaactcagctgcctgtttcgtttcgt
catttgattttgccggaaaaaaaccctccccccactgagctcctggatttgcagccactc
cctgtatcagcgctgaggaacccggcctttgagagcctttataaagacaagtttccttat
tttaacccgatacagacgcaagttttcaacacgctgtgcaactcggatgagaacgttcta
attggtgcacccaccggtagtggcaagactatctgtgctgagtttgctgttctgcgcctc
cttcaacagatctccgattgtagatgcgtgtatgtcactcctcttcaatctctggctgac
caggtgtatgcagactggcagagcaagtttgctgttcagttgggaaagaatgtggtgatg
ttgacgggagagacgagcgcagatctcaaacttctcgctaagggtaacgtgattgttagc
accccagaacaatgggatgtgttgtcccgcagatggaaacagagaaagaatgtgcagaat
gtccatttgtttatccttgatgaagcccatctgatcggtggagaatcggggcctgtgatg
gaggtgatcggttcacgcatgaggtatatctcgtcacagatcgagcgaaatattaggatt
gtggctttaagttcctctctgtccaatgctaaggatgtgtctcagtggctgggagtcagt
gctacaggcctgttcaattttcaccccaatgttaggccaatccctcttgaactgcacatt
cagggtttcaacatcacgcatacagcatctcgcttgatcgccatgacaaagcctacctat
caggcgatagttaaacattcacctaagaaaccagtcatcgtgtttgtaccctcgagaagg
cagactaaacttgctgctctagatctacttaccttctccggggctgagaacgacgcgcaa
agatttttgcattgcaccgaggaggatcttcaaccttttatcaaacgtttaaacgacaag
acactgaaagagaccgtaggatacggcgtggcgtatttacacgaaggcctctccgacacc
gaaacaaaaatcgtggagcagctgttcaattccggagccatacaagtggtgatcgtgtca
cgcaatctttcctgggcgatcaacatgagcgctcatttggtgattatcatggatacacag
ttctacgaaggaaagatccacgcttacgttgactaccctgtgaccgatgtgttacagatg
attggtcgcgccaacagaccacttttggatgactctgggaaggctgtgattctctgccaa
gcatcaaagaaagagtatttcaagaagttcttgtatgaaccgcttcccattgagtcacac
ttggatcattgtttacacgatcatttcaatgctgaagtggtgacaaagacagttgagaac
aagcaggatgcagtggattatttgacatggacttttctgtatcgcagaatgacccagaac
ccaaactattacaatcttcaaggtgttacccatcgtcatttgtcagatcatatgtcagat
atggtagagaacacactcaatgacttgcagcaatcaaagtgcgtctcaatcgaggatgag
atggacgtctcaccgctaaatcttggaatgattgcagcctactattacatcaattacaca
acgattgaactttttagcgtgtctttgaacgcgaaaaccaaactgcgtggtttgattgag
atcatttcgtcagcaaacgaatacgacagactgcccatccggcatcatgaggacactact
ttaaagcagctgatgaaccgtgtgccgcacaaagtgacaaatccaaagtacaatgatcct
catgtcaagacaaacctactgatacaggcgcacatgtcgcggatgcaattgtcagctgag
atgcagtcagacactgaaacaatactcggcaaggccatgcgtcttgttcaagcttgtgtg
gatgtgctcagtagcaatggatggctttcaccagccctcgctgccatggagcttgctcag
atgataacacaagccatgtggagtaaggattcttacctcaagcagattccgcacttcaca
gctgaagtcgtcaaacgatgtgtcgacaaggacgtggagtctgtgtttgacataatggat
ttggaagatgaagagagaaacaagctgctgcgtttggacgataatcagatgcaggacgtg
gctcgcttttgcaatcgctaccctaacattgaattgtcgtttgaagtgaatgacgaggac
aacatctctgctggctctcctgtgaacgtgatcgttgacctcgaccgagaagacgagcag
ccaggccctgtgattgcaccgttctttccgcagaaacgcgaggagggttggtggctagta
gttggcgacacaaagaataacgggttaatttccatcaaacgtttgacgctccaacaaaaa
gctaaagtcaaactggacttcgttgcgccgagttctccagggacgtattcatacacactg
tttttcatgtgtgattcctacatgggctgtgaccaggaatatccattcaagatcaatgtt
ggcgaggcagcgagtggggacgaagagagcggggacagtgacgcagacgactag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (22)   

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