KEGG   Advenella mimigardefordensis: MIM_c29200
Entry
MIM_c29200        CDS       T03016                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
amim  Advenella mimigardefordensis
Pathway
amim00740  Riboflavin metabolism
amim01100  Metabolic pathways
amim01110  Biosynthesis of secondary metabolites
amim01240  Biosynthesis of cofactors
amim02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:amim00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    MIM_c29200 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    MIM_c29200 (ribD)
Enzymes [BR:amim01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     MIM_c29200 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     MIM_c29200 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: AHG64984
UniProt: W0PDN5
Position
complement(3333167..3334285)
AA seq 372 aa
MDRALALARSVMFSTSPNPRVGCVIVNQGKVLGEGATQPPGGPHAEVCAIRDAQAKGHAL
AGSTFYVTLEPCSHYGRTPPCVDALLEAKPARVVIAARDPNPLVSGAGISKLQNAGITVE
IGLGLEQALEINPGFVSRMSIQRPWVRMKIASTLDGKVALNNGRSQWITGPQARADGHHW
RARACVILTGSGTVRDDDPQLTVRDVATPRQPIRAVIDSQFAIDEDARLFDGNPVWVFVT
EYNVAKAERLAARNVRVITVDEKNKHVDLKAVMAWLGQQDINEVHVEAGPGLNGALLQAG
CVDELLVYLAPTILGDARSSVAHTPFNVLADAYRFAFFDNAACGKDLRLRARLPTRWNQL
QLQSGSSKPDTE
NT seq 1119 nt   +upstreamnt  +downstreamnt
atggatagggcactggcgctggcacgcagcgtcatgttcagtaccagccccaacccgcgg
gtaggctgcgtgatcgttaatcagggcaaggtcctgggcgagggcgccacgcaaccccca
ggcggtcctcatgcggaagtgtgtgccattcgcgacgcgcaggccaaaggtcatgcattg
gccggctccaccttttacgtcacactggaaccctgcagccattatggccgtacgccaccc
tgcgtggacgcgctgctcgaagctaaacccgcgcgggtcgtgattgccgccagggacccc
aatccgctggtgagtggcgcaggcatcagcaaactgcaaaacgccggaatcacagttgaa
attggtctggggctggaacaggcactggaaatcaatcctggttttgtatcgcgcatgagc
atacagcgtccctgggtgcgcatgaaaatagccagcaccctggacggcaaggttgccctg
aacaatggtcgctcgcaatggattaccggcccccaggcgcgtgccgatggacatcactgg
cgtgcccgtgcctgcgtgatcctgaccggttcgggcaccgtgcgcgatgacgatccgcag
cttaccgtgcgcgacgtcgccacaccccgtcaacccattcgcgccgtcattgacagtcaa
tttgccattgatgaagacgcccggttatttgacggcaacccggtgtgggtttttgtgacc
gagtacaacgtagccaaggccgaacgcctggcggcacgcaacgtgcgcgtgattaccgtc
gacgaaaaaaacaagcacgtggatctgaaagccgtgatggcctggctggggcagcaggac
atcaatgaggtacatgtggaagcggggccgggtctgaatggcgcgctgctgcaggccggt
tgcgtggatgaactgctggtctacctggctccgaccatcctgggggatgctcgctcgtct
gtcgcgcatacgccttttaatgtgctggccgatgcctatcgctttgcgtttttcgacaac
gccgcttgcggcaaagacctgcggctacgggccagattgcccacgcgctggaatcaatta
caattgcaatcaggcagcagcaagcctgatacggagtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (29)   

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