KEGG   Alligator mississippiensis (American alligator): 102560222
Entry
102560222         CDS       T03087                                 
Symbol
U2AF1
Name
(RefSeq) U2 small nuclear RNA auxiliary factor 1
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
amj  Alligator mississippiensis (American alligator)
Pathway
amj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:amj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102560222 (U2AF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:amj03041]
    102560222 (U2AF1)
Spliceosome [BR:amj03041]
 Complex A
  U2 snRNP components
   U2 related factors
    102560222 (U2AF1)
 Complex B
    102560222 (U2AF1)
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_2
Other DBs
NCBI-GeneID: 102560222
NCBI-ProteinID: XP_006260531
Position
Un
AA seq 263 aa
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQ
TADGSHCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE
EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKKWQRKVNVTEWQEASDKLVNVKHRSRSRSRERRSRSRDRGRGGGGGGGG
GGGGGGRERDRRRSRDRERSGRF
NT seq 792 nt   +upstreamnt  +downstreamnt
atggcggagtatctggcctccatcttcggcactgagaaggacaaagtcaactgttcattt
tatttcaaaattggagcttgtcgtcatggagacagatgttctcgattacacaataagcca
acatttagccagaccatcttgattcaaaacatctatcgtaacccccaaaacagtgcacag
acggctgacggctcacactgtgctgtgagcgatgttgagatgcaggaacattatgatgaa
ttctttgaggaggtcttcacagaaatggaagagaagtatggtgaagttgaggagatgaat
gtttgtgataaccttggagatcatctagttggaaacgtgtatgtcaagtttcgtcgtgaa
gaagatgcagaaaaagctgtgattgacctgaacaaccgttggtttaatgggcagccaatt
catgctgagctctctcctgtgactgacttcagagaagcttgctgccgtcaatatgaaatg
ggagagtgcacacgaggaggcttctgtaactttatgcatttgaaacccatttctcgagaa
ttgcgacgtgagttatatgggcgtcgtcgtaagaagtggcaaaggaaagtgaacgtcaca
gaatggcaagaagcttctgataaactggtgaatgtgaagcatagatccaggtcaaggtcc
cgtgaacgtcgttctagatccagagatcgtggtcgtggtggcggtggtggtggcggcgga
ggaggaggaggtggaggacgggaacgtgataggaggcggtcaagagaccgtgaaagatct
ggtcgattctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (5)   
   Pfam (5)   
All databases (21)   

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