KEGG   Alligator mississippiensis (American alligator): 102561800
Entry
102561800         CDS       T03087                                 
Name
(RefSeq) actin, cytoplasmic type 5
  KO
K05692  actin beta/gamma 1
Organism
amj  Alligator mississippiensis (American alligator)
Pathway
amj03082  ATP-dependent chromatin remodeling
amj04145  Phagosome
amj04210  Apoptosis
amj04510  Focal adhesion
amj04520  Adherens junction
amj04530  Tight junction
amj04810  Regulation of actin cytoskeleton
amj04814  Motor proteins
amj04820  Cytoskeleton in muscle cells
amj05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:amj00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    102561800
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    102561800
  09143 Cell growth and death
   04210 Apoptosis
    102561800
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    102561800
   04520 Adherens junction
    102561800
   04530 Tight junction
    102561800
  09142 Cell motility
   04814 Motor proteins
    102561800
   04820 Cytoskeleton in muscle cells
    102561800
   04810 Regulation of actin cytoskeleton
    102561800
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    102561800
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:amj03021]
    102561800
   03019 Messenger RNA biogenesis [BR:amj03019]
    102561800
   03036 Chromosome and associated proteins [BR:amj03036]
    102561800
   03029 Mitochondrial biogenesis [BR:amj03029]
    102561800
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:amj04812]
    102561800
   04147 Exosome [BR:amj04147]
    102561800
Transcription machinery [BR:amj03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     102561800
Messenger RNA biogenesis [BR:amj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     102561800
Chromosome and associated proteins [BR:amj03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     102561800
    NuA4 complex
     102561800
  Chromatin remodeling factors
   BAF complex
    102561800
   PBAF complex
    102561800
   GBAF(ncBAF) complex
    102561800
   SWR1 complex
    102561800
Mitochondrial biogenesis [BR:amj03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    102561800
Cytoskeleton proteins [BR:amj04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     102561800
Exosome [BR:amj04147]
 Exosomal proteins
  Proteins found in most exosomes
   102561800
SSDB
Motif
Pfam: Actin
Other DBs
NCBI-GeneID: 102561800
NCBI-ProteinID: XP_006275176
UniProt: A0A151M952
Position
Un
AA seq 376 aa
MAEEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGHKDSYVGDEAQ
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKM
TQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAMDFDVEMTTAASSCSLERS
YELPDGQVITIGNERFRCPEAMFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVL
SGGTTMYPGIADRMRKEICTLAPATMKIKIVAPPERKYSVWIGGSILASLSTFQQMWISK
EEYDEAGPAIVHRKCF
NT seq 1131 nt   +upstreamnt  +downstreamnt
atggctgaagaagagattgcagcgctggtggttgacaatggctctggtatgtgtaaagct
ggctttgcaggggatgatgctccccgggctgtgttcccttccatcgtggggcgccccagg
caccagggggtcatggtggggatgggccacaaggacagctatgtgggagatgaagcccag
agcaagcgaggcattctgaccctgaagtaccctattgagcatgggattgtcaccaactgg
gatgacatggagaagatctggcatcataccttctacaatgagcttcgagtggcccctgag
gagcacccaatcctgctcacagaggctcccctgaacccaaaggctaatagggagaagatg
actcagattatgtttgaaaccttcaatgctccagctatgtatgtggctatccaggctgtg
ttgtccctgtatgcctctggccgtaccactggcattgtcatggactctggggatggcgtc
acccacaccgtgcccatctacgagggctatgccttgccacatgctatcctgcgtctggac
ttggcaggccgcgacctgactgactacctcatgaagatcctgacggagagaggctatagc
ttcaccaccacagccgagagggagattgtgagggacatcaaggaaaagctgtgctatgtg
gctatggactttgatgtggagatgaccacagctgcatcctcttgctccctggagaggagc
tatgagctgcctgatggccaagtcatcactattgggaatgagcggttcaggtgtccagag
gccatgttccagccctccttcctgggcatggagtcctgtggcatccacgagaccactttc
aactccatcatgaagtgtgacgtggacatccgaaaagacctgtatgccaacacagtgctg
tctgggggcaccaccatgtacccgggcattgctgaccgtatgaggaaggagatctgcacc
ttggcacctgccaccatgaaaatcaagatagttgctccaccagagcgtaaatattcagtc
tggattggaggatcgatcctggcctctctgtccaccttccagcagatgtggatcagcaag
gaggagtatgatgaagctggccctgctattgtccaccgtaaatgcttctaa

  All links  
Ontology (7)   
   KEGG BRITE (7)   
Pathway (10)   
   KEGG PATHWAY (10)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (26)   

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