KEGG   Alligator mississippiensis (American alligator): 102564541
Entry
102564541         CDS       T03087                                 
Symbol
KCNU1
Name
(RefSeq) potassium calcium-activated channel subfamily U member 1
  KO
K05274  potassium large conductance calcium-activated channel subfamily M alpha member 3
Organism
amj  Alligator mississippiensis (American alligator)
Pathway
amj04270  Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:amj00001]
 09150 Organismal Systems
  09153 Circulatory system
   04270 Vascular smooth muscle contraction
    102564541 (KCNU1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:amj04040]
    102564541 (KCNU1)
Ion channels [BR:amj04040]
 Voltage-gated cation channels
  Potassium channel, calcium- and sodium-activated (KCa/KNa)
   102564541 (KCNU1)
SSDB
Motif
Pfam: Slowpoke_C BK_channel_a Ion_trans Ion_trans_2 TrkA_N
Other DBs
NCBI-GeneID: 102564541
NCBI-ProteinID: XP_019347112
Position
Un
AA seq 972 aa
MMLSAQTFVGRVLVILVFLMSIGSLIIYIINCASPIEYFSSFPDETLPVDMGFNTFFLFY
FGLRFLAADDKLKFWLELNSIVDFFTIPPVCASYYLKRNWLGFRFLRALRLLELPKILQF
LKITKTSNSIKLVKLLAVFLSTWLTSAGFIHLVENSGDPWINYDNSQFLSYFECLYLIMA
TMSTVGYGDVVAKTCLGRVSMIFFIIGGLVLFANFIPEIADIVESNKKYEGSYTVVKGRK
YIVVCGNITLESVTAFLRDFLPQDTGDICTEILFLGESLPSLELEAVFNCYSPYTTFFHG
SALNDEDLKRVQMGSANACLILADICSSEPYTEDTSNIMRVLSIKNHYPNTRVIIQIIQS
HNKVYLPNIPNWDWRIGDSIICFAELKLGFIAQSCLVPGLSTLLTSLFVRKESAEVKRKS
MRHRNVLKGSAYQVMTYKLSNDFVGMSFPEVCRLCFVKLNLVLFAVEFRFGIHGNSILIN
PSAKIMLHRNVMGFFIAKSMAEVKRAHFYCKACHSDIDNPKLIEKCHCRSKLRRRTITEK
LKARRETLCVPDQDPVKSRSLGVLPPSSYAASASDVMGDKNSDAMLDSTGMFHWCHAVSL
EKAILNPKKEATSDLHDHIVVCVFGDANTTLIGLRDFVMPLRASNFIYEELRDIVFVGSL
EYLKREWGFIQNFPKLWLYQGSALSCADLKAVNIRHCAMCAILSYSSKSSSSPILVDTES
ILATLNIRAMQFKCSTVSEEAVGRVRTLENQSALYYKRIPIITELKSMSNAHFIDQSAGS
SGSQIPEQELHLSTPFSSGAIFSDNFLDSLLSTTYCNHHVLALLQTLVTGGTSPELEEQL
AEKNELSASDNSISYVAPRVRCKLALLPLWKELAAVSPEDCFGDVFCKALDLFGILCFGL
YRLIEEPNPYKNRCVIARPPNNFKMLPTDLLFCVVPFNISTTSSLSDWAEALPPSRQPSP
TDYSKADMEVNA
NT seq 2919 nt   +upstreamnt  +downstreamnt
atgatgctatccgctcaaacatttgtggggagagttctggtgatactggtgttcctaatg
agcattggatccctcattatctacattatcaactgtgcctcacctatagaatacttcagc
tcgttcccagatgaaacccttcctgtagatatgggcttcaacaccttcttcctcttctat
tttggattacggttcttggcagctgatgacaagctgaaattctggctggagctgaactcc
attgtggatttcttcactattcctccagtctgtgcctcctattatttgaagaggaactgg
cttggttttcgatttttgcgagcgctcaggttgctggaacttcccaaaatattgcagttt
ctgaagatcaccaagaccagtaattcaatcaagctggtcaaactgttagctgtatttctc
agcacctggctcacatctgcagggtttattcacctggtggagaattctggagatccttgg
atcaattatgacaattctcaattcctgagctattttgaatgtttgtacttgataatggcg
actatgtcaaccgttggctatggagatgttgtagctaaaacttgccttggtcgtgtttcc
atgattttcttcatcattggcgggttggtcctgtttgcaaatttcatccctgaaattgcg
gatattgttgaaagcaacaaaaaatatgaagggtcctacacggtggtaaaaggaagaaaa
tatattgttgtctgcggtaatatcactctggagagcgtgactgctttcctgcgagacttc
ctgccccaggacacaggagatatttgcactgagatactctttctgggagaatctcttcct
agcctggagctggaagctgtattcaattgctattcaccctacaccactttcttccatggt
tctgcactgaacgatgaagatctgaagcgagttcagatgggatctgcaaatgcatgtctg
atccttgcagacatttgttcttcagaaccttacactgaagacacttccaatattatgagg
gtgctctctatcaagaatcactatccaaacaccagagtcatcatacagataatccagtca
cataacaaggtatacctgccaaacatccccaactgggactggagaataggggacagcatc
atctgttttgccgaactaaaacttggatttatagcacaaagttgcttggttccaggcctg
tccaccctcctaaccagtttgtttgtgaggaaggagagtgctgaggtaaagagaaaaagc
atgaggcacaggaatgttttgaaaggcagtgcctatcaagtgatgacttacaagctctcc
aatgattttgtaggcatgtcttttccagaggtttgccggttgtgctttgtgaagctgaac
cttgtgctgtttgctgtcgagttcaggtttggcattcatgggaacagtatcctaatcaac
ccgtctgcaaagataatgctccatcgaaatgtaatgggcttttttattgccaaatccatg
gcagaagtcaaaagggcgcatttttactgtaaagcctgccatagtgatattgataatcca
aaactgattgaaaaatgtcattgtagaagcaaacttcggaggagaaccattacagaaaag
ctgaaagcccgccgagaaactctgtgcgttccagaccaggacccggtaaagtcaaggtct
cttggggttcttcctccttcaagttatgctgccagcgcatcagatgtcatgggggacaag
aatagtgatgccatgcttgattcaacaggaatgtttcattggtgccatgctgtgtctttg
gaaaaagccatcctgaatccaaagaaggaagccacctcagacctgcatgatcacattgtg
gtatgtgtctttggggatgccaacacaacactcattggtttgcgggactttgtgatgcct
ttacgagctagcaacttcatttatgaggagctgagagacatcgtctttgtcgggtctctg
gagtacctgaaaagagaatggggatttatccagaatttcccaaagctgtggttgtaccag
ggtagtgctctttcctgtgctgacctgaaggctgttaacataaggcactgcgccatgtgt
gccatcctgtcctatagctccaagtcatctagtagtccaatcctggtggacacagaaagc
atcctggccacacttaacattcgagccatgcagtttaagtgcagcacagtctctgaagag
gcagttggcagagtgagaacattggagaatcaatcagcgctctattataaaaggatcccc
atcatcacagagctgaaatccatgtcaaatgcccactttattgatcagagtgctggaagc
agcgggtcgcagatcccagagcaggagctgcatctctccactcctttttccagtggagct
atcttctcagataactttttggattctcttctgtccactacctactgtaaccaccatgtc
ttagctttgctccagactctggtgacgggtgggacaagcccagagctggaggagcagctt
gcagagaagaatgaactgagtgccagtgacaacagcatatcatatgttgcacctagggtg
aggtgcaagctggctcttttgccactgtggaaggaacttgcagcagtttccccagaggac
tgtttcggagatgttttctgcaaagcattagacttgtttggaatcctttgctttggcctc
taccgtctcatagaagagcctaatccatacaagaacaggtgtgtgattgctcggcctccg
aacaatttcaagatgttgcctacagatctgctcttttgtgttgtcccattcaacatctca
acaaccagtagcctgtctgactgggcagaggctctgcccccaagcaggcagccaagccca
acggactactccaaggctgacatggaagtgaatgcatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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