KEGG   Alligator mississippiensis (American alligator): 102565050
Entry
102565050         CDS       T03087                                 
Symbol
TOPORS
Name
(RefSeq) TOP1 binding arginine/serine rich protein
  KO
K10631  E3 ubiquitin-protein ligase Topors [EC:2.3.2.27]
Organism
amj  Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:amj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:amj04121]
    102565050 (TOPORS)
   03036 Chromosome and associated proteins [BR:amj03036]
    102565050 (TOPORS)
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:amj03037]
    102565050 (TOPORS)
Enzymes [BR:amj01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     102565050 (TOPORS)
Ubiquitin system [BR:amj04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    102565050 (TOPORS)
  UBL E3 ligases
   102565050 (TOPORS)
Chromosome and associated proteins [BR:amj03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    102565050 (TOPORS)
Cilium and associated proteins [BR:amj03037]
 Primary cilia and associated proteins
  Other primary cilia associated proteins
   102565050 (TOPORS)
SSDB
Motif
Pfam: zf-C3HC4 zf-C3HC4_3 zf-C3HC4_2 zf-RING_2 zf-RING_UBOX zf-rbx1 zf-C3HC4_4 zf-RING_5 zf-ANAPC11 Rad50_zn_hook
Other DBs
NCBI-GeneID: 102565050
NCBI-ProteinID: XP_006265523
Position
Un
AA seq 1034 aa
MASEALACPAEDMTPATEERAVDSSFSPRAGTSRLHQTVPTDASPDSKCPICLDRFDNVA
YLDRCLHRFCFRCVQEWSKNKAECPLCKQPFHSIIHTVRAEDDFKEYILKPSENGSFASP
NGRRFRYRTTVTREHRTTSSQRSSSSRRTLSPPDNGILFEAFSSQPVQQRDVGIQQMIRR
LASRRQASAEGRSLRQIQEQEIINFRRALYRSGVRIRSVQDGGRYREISAEFFRRNPACL
HRLVPWLKRELTVLFGAHGSLVNIVQHIIMSNVTRYDLGSKAFADDLKPFLLRRTDHFLH
EFISFARCPFNIEAYDQHANYDCPAPSYDEGSHSESSIITISPDEADSQEPDHNASTTGT
DQAPWDDETPGPSYSSSEQVHAAVASPSDTSESSDEEPARNGSDAQGQSQANTEPNDISD
ASSENCVIVGYVKPLAERTPELVELSSDSEESVAEEKSENVKKPQPIQFHSFSDSEASGC
SLLHSPVSKDNKSICKGSMSPLIKTAEAEKSEEDKIRDASTWDSLQGSSTRKNSVCSPCN
HRLSRKRRSRSSESSSQHSHSRDRHSHRSKRKHRSKESLKNRLPRSRDSSGHRSKRNRRR
SRTRDTSLSRKSLTLSLSSESTISRGVSRSRSRSNGHSKRRSRSRESDHYYIRENYQNRY
QWGYTFYSRRMDRDGYESSYRRRAQARAHYSRQSASPEYRIQSFSERTNTRNQRGHNESQ
YYCYERRRSRSRSSNRSRTTSGGADRMRCEKPGGKRKYKTRHLESVHKEKAPSPSKGEGN
GHQKPMSKYSGCYQNENSPQENQASNETKHRKRKKKIRSPSVEIVYEGKATDTTRHHKKK
KKKHKKHRRHHTGNSAPPSPVVITVDSDSDKEIGICETVECDSSVSWTTITQLNERENES
PSSLLDTSNHKDVYAVTGETAISNKDRITNSRKDLADDIGNVDLRLQKISDEQTPAVAVS
SSSSCSSSSSSSSSTLGIETLPINVETAQMEASSHLPSPRTSFVDNSGRPPLILRLPKKL
IDRSYWLDTAEKKM
NT seq 3105 nt   +upstreamnt  +downstreamnt
atggcatcagaagccttagcgtgcccagcagaggatatgacccctgcaactgaggaacgt
gctgtggatagcagcttctcaccgagagctggaacaagcagactgcatcagacagtgccc
acagatgcatctccagactcaaagtgtccaatctgtttggacagatttgacaatgtagcc
tatttagatcgttgtctgcataggttttgcttccgctgtgttcaagagtggtcaaaaaac
aaagctgaatgcccactctgtaaacagccgttccattctatcatccacactgtgagagct
gaagatgattttaaagagtatatactaaagccttcagagaatggctcttttgctagccct
aatggacggagatttcgttaccgcactaccgttacaagggaacatcgtacaacttcttct
caaaggagttcctcttctcgaaggacgctgtcacccccagacaatggaatattgtttgaa
gcgttctcaagtcagcccgtgcaacagagagacgttgggattcaacagatgataagaagg
cttgcctcaaggaggcaggctagtgcagagggcaggtctctgcgacaaattcaagaacaa
gaaataattaacttccgaagagctctctatcgctctggtgtgcgcattagaagtgttcaa
gatggtggtcgctatagagaaatttcagcagagtttttccgcaggaaccctgcttgtctt
cacaggttagttccgtggttgaagcgggaactaactgtcctttttggtgcccatggttct
ttagtcaacattgttcagcacatcatcatgagtaatgtgactagatatgatctgggaagt
aaggcctttgctgatgacttaaagccttttttactccgtcgcactgaccactttttacat
gaatttatcagttttgcccgatgcccttttaacatagaagcatatgaccagcatgccaat
tatgattgtcctgctccttcatatgatgaaggaagccactcggaatcatcaattattaca
atatctccagatgaggcagattcccaagaaccagatcataacgcatccacaactggtact
gatcaggccccttgggatgatgaaaccccaggaccatcatattcaagttcagaacaagtt
catgctgctgtggcttctccttctgatacttcagaaagttctgatgaggaacctgctcga
aatggatcagatgcacaagggcagtcacaagctaatacagagccaaatgatatcagtgat
gcttcttcagaaaattgtgtcattgttggttatgttaagccattagctgagagaacacca
gaacttgttgagctgtcctctgattctgaggagtcagttgctgaggagaaaagtgagaat
gtgaagaaaccacagcctatccagtttcacagtttcagtgacagtgaagctagtgggtgc
tcattactgcactccccagtatctaaagataataaaagtatctgtaaaggcagcatgtca
cccttgattaagacagcagaagcggaaaagagtgaggaagataaaataagagatgcatct
acttgggactctttgcagggttcctctaccaggaaaaacagtgtgtgctctccatgtaac
catagattatccagaaagaggaggtcaaggagttccgagtcgtcttcccagcactctcat
agcagagaccgtcacagccatagatccaaaaggaaacatcgtagcaaggaaagcttaaaa
aaccgattaccaagaagcagggatagtagcgggcatagaagtaaaagaaacagaaggaga
tcaagaactcgagacacaagtttatccagaaaaagcctgactctctctctaagtagcgag
agcactatatctagaggtgttagcaggtcacgatcccgcagtaatggccatagtaaaaga
agatccaggagtagagagagtgatcactattatataagagaaaattaccaaaataggtat
cagtggggatacactttctacagtagacgcatggacagagatggctatgagtcctcatat
agaagaagggctcaggccagagctcattattcaaggcagtcagcaagtccagaatataga
atacagtctttttcggaaaggacaaatacacgaaatcaaagaggacacaatgaaagccag
tattactgctatgaaagacgcaggtcaaggagtcgatctagtaatagatctaggaccaca
tctggaggggctgatagaatgcggtgtgaaaagcctggtggaaaaaggaaatacaagacg
cgccacttggagagtgtgcacaaggagaaggcaccaagcccttctaaaggagaaggaaat
ggccaccagaaacctatgtcaaagtacagtggttgctaccaaaatgagaacagccctcaa
gaaaaccaagcaagcaatgaaacgaagcatagaaagagaaagaaaaaaatcagaagcccg
agtgtggagattgtatatgaaggaaaggctactgacacaactaggcatcataaaaagaaa
aagaaaaagcacaaaaaacacagaagacaccatacaggtaattcagcacctccttctcca
gtcgtgattacagttgacagtgatagtgataaagagattggaatatgtgaaactgtggaa
tgtgacagtagtgtttcttggacaaccataactcagttaaacgagcgagaaaacgaatct
ccatcatctctcctggacacaagcaatcataaggatgtatatgcagtaactggtgaaact
gcaatatcgaacaaggatcgtattactaacagtaggaaagacctggctgatgacattgga
aatgtagatctccggctccaaaaaatatcagatgagcagactcctgctgtggctgttagc
agcagcagtagttgtagtagtagcagtagtagtagtagtagtacattgggaattgaaact
ctgcctatcaatgttgaaactgcacagatggaagcatccagccatttgccttctcccagg
acatcatttgtagataactcggggaggccaccattaatattaagactgccaaagaaactt
attgacagatcatactggcttgacactgcagaaaaaaagatgtag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (10)   
   Pfam (10)   
All databases (27)   

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