KEGG   Alligator mississippiensis (American alligator): 102565850
Entry
102565850         CDS       T03087                                 
Symbol
COL21A1
Name
(RefSeq) collagen alpha-1(XXI) chain
  KO
K16629  collagen type XXI alpha
Organism
amj  Alligator mississippiensis (American alligator)
SSDB
Motif
Pfam: Collagen VWA VWA_2 VWA_3 Laminin_G_3 Laminin_G_2
Other DBs
NCBI-GeneID: 102565850
NCBI-ProteinID: XP_019352489
Position
Un
AA seq 957 aa
MAQIIKFVQAVLILLLQDYITAEDGETRASCRTAPVDLVFILDGSYSVGPENFEIIKKWL
VNITSNFDIGPKFIEVGVVQYSDYPILEIPLGSHVSSENLIREMESIHYLGGNTRTGRAI
QFAIDHLFAKSSRFLTKIAVVLTDGKSQDEVKDAAAEARKNKITLFAIGVGSEIEEEELR
AIANKPSSTYVFYVEDYIAISRIREVIKQKLCEESVCPTRIPVASRDEKGFDILTGLGVK
KKVKKRIQIPSSNAKAYEITSRIDLTEFTRNVFPEGLPPSYVFVSTQRFKVGKTWDLWRI
LSLDGKPQIAVTVNGEDKTLSFTTTSLINGTQVITFTAPRVKTLFDEGWHQIRLLVTEEY
VTLYMDDQEIEMKPLHPVLGIYISGLTQIGKYTGKEETVQFDIQKLRIYCDPEQNNRETA
CEIPGFNGECKNGPSDVGSTPAPCVCPPGKQGPPGAKGDPGQPGNHGYPGQPGPDGKPGY
QGTAGTPGIPGNPGIQGQRGIPGSKGEPGKDGAKGERGLPGFPGLHGMPAPKGERGPKGD
QGPPGVYGKKGAKGEKGDSGFPGIHGRPGEPGRNGKDGLPGSPGFKGEAGQPGSPGPEGH
QGEPGIPGIPGSQGTKGQKGEIGPSGQPGTKGSPGEAGTIGREGAPGLPGAPGPKGDKGE
PGIQGKPGLSGAKGEQGGVGIPGEPGYSGMPGTPGTKGTKGSQGERGIQGQKGEKGRSGT
PGHQGTKGLNGERGEKGEKGDPGIRGFSGQKGEAGIHGLVGPPGPRGQPGDRGLPGPPGS
DGKPGREFSEEFIRQVCTDVLRTQLPAILQSERLHNCNHCQTQSAPPGLPGPPGPTGPEG
PRGFPGLPGNDGVPGLSGIPGRPGTRGTRGLPGKNGAKGGPGIGLPGEQGPPGPPGPEGP
PGISKEGRPGETGQPGKDGDRGNPGMRGPAGPPGICDPSLCFSVIVGRDPFRKGPNY
NT seq 2874 nt   +upstreamnt  +downstreamnt
atggcacagatcataaagtttgttcaggcagttttaattctgctacttcaggattacatc
actgctgaagatggtgaaacaagagcaagttgcagaactgctccagtggatttagtcttc
atcttggatggctcctacagtgttggcccagaaaactttgaaataatcaaaaaatggctt
gtaaatattacaagtaattttgatatagggccaaaattcatagaagttggagtagtccag
tacagtgattaccctatacttgaaatccctctaggaagtcatgtatccagtgaaaaccta
atccgcgaaatggaatccatacactatttaggtggaaatacaagaacaggaagagctatc
cagtttgcgattgaccatctttttgccaaatcctcaagatttctaactaaaatagctgtt
gttctcactgatggcaaatcccaagatgaagtcaaagatgcagcagcagaggcaagaaaa
aacaaaatcactttgtttgctattggtgttggctcagaaattgaggaggaagaacttaga
gctattgccaataaaccctcatcaacttatgtattctacgttgaagattatattgcaatt
tctagaataagagaagtaataaaacagaagctctgtgaagaatctgtttgtccaacaaga
attccagtggcatctcgagatgaaaaaggatttgatattctcacaggattgggtgtgaag
aagaaggttaaaaagagaattcagattccatcttctaatgcaaaagcttatgaaataaca
tcacgtattgacttaacggaatttacaaggaatgtgtttccagaaggccttcctccatca
tatgtgtttgtctccactcagaggtttaaggtcgggaaaacatgggatttatggaggatt
ctaagcctggatgggaagccacaaatagcagttactgtaaatggggaagataaaacatta
tcatttactactacaagcttaataaatggcactcaggttattacttttactgcacctcgt
gttaagacattgtttgatgaaggctggcatcagattcgtctcctggtaacagaagagtat
gtaactttgtacatggatgatcaagaaattgaaatgaagccattacatcctgttttgggt
atatatatcagcggattaacccaaataggaaagtacactgggaaagaggaaactgtgcaa
tttgatatacagaagctaagaatctattgtgacccagaacaaaataatcgagaaactgct
tgtgaaatcccaggatttaatggagagtgcaagaatggccctagtgatgtgggttccact
ccagctccatgtgtatgtcctccaggaaaacaggggcctcctggtgccaaaggggatcct
ggacaacctgggaaccatggttatcctggacaacctggtccagatggtaagcctgggtat
caaggaacagcaggaactccaggaatcccaggaaacccagggattcaaggacaacgtggc
ataccaggaagcaagggtgagccagggaaagatggtgcaaagggtgaacgtggacttcct
ggttttcctggattacatgggatgccagcaccaaagggtgagaggggccctaaaggagat
caaggaccaccaggagtttatgggaaaaagggtgcaaaaggagaaaaaggtgattcaggt
tttccagggatacatggacgacctggagaacctgggagaaatgggaaggatggattacct
ggaagtcctggtttcaagggcgaagctggacagcctggttctcctggcccagaaggacat
cagggtgaacctggaattcctggaatccctggaagtcaaggaacgaaaggacaaaagggt
gaaattggaccttcagggcaaccgggaacaaaaggatccccaggagaggcaggtacaata
ggtcgtgaaggcgcacctggtctacctggagcacctgggccaaagggagataaaggtgaa
cctggaatacaagggaagccaggattatcaggagctaagggagaacaaggaggagtaggt
attccaggtgaaccagggtactcgggcatgcctgggacaccgggtacaaaggggaccaag
ggaagccagggcgaaagaggtatccagggacaaaaaggagaaaaaggaagatcaggaact
ccaggtcatcagggaacaaaaggactgaatggagaaagaggagagaaaggtgagaaagga
gaccctggcattagaggcttcagtggacaaaaaggcgaggctggcattcatggtttggtt
ggacctcctggaccaagaggacagccaggggacagaggacttccagggccacctggatca
gatggaaaacctggaagggaattttcagaagagtttattcgccaagtttgtacagatgta
ttgagaacccagttgcctgctatccttcagagtgaaaggctacacaactgcaaccattgt
cagactcaaagtgctccccccggactccctggtccaccaggaccaacaggtccagaaggc
cctagaggttttcctggtttgcctggaaatgatggggttccaggtctctcaggaattcct
gggcgtcctggtacacgtggaacaagagggttaccaggaaaaaatggggcaaaaggtggc
ccaggaattggacttcctggtgaacaaggtcccccaggtcctccaggtcctgaaggtcca
cctggtattagtaaagagggacgtcctggagagactgggcagcctggtaaagatggagat
cgtgggaatcctggaatgcgaggaccagctggaccccctggaatttgtgatccatcatta
tgttttagtgtaattgtaggaagagatccatttagaaaggggccaaactattaa

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (13)   

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