KEGG   Alligator mississippiensis (American alligator): 102566175
Entry
102566175         CDS       T03087                                 
Symbol
PDGFRB
Name
(RefSeq) platelet derived growth factor receptor beta
  KO
K05089  platelet-derived growth factor receptor beta [EC:2.7.10.1]
Organism
amj  Alligator mississippiensis (American alligator)
Pathway
amj04010  MAPK signaling pathway
amj04020  Calcium signaling pathway
amj04510  Focal adhesion
amj04540  Gap junction
amj04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:amj00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    102566175 (PDGFRB)
   04020 Calcium signaling pathway
    102566175 (PDGFRB)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    102566175 (PDGFRB)
   04540 Gap junction
    102566175 (PDGFRB)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    102566175 (PDGFRB)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:amj01001]
    102566175 (PDGFRB)
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:amj04090]
    102566175 (PDGFRB)
Enzymes [BR:amj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.10  Protein-tyrosine kinases
    2.7.10.1  receptor protein-tyrosine kinase
     102566175 (PDGFRB)
Protein kinases [BR:amj01001]
 Receptor tyrosine kinases (RTK)
  PDGFR family [OT]
   102566175 (PDGFRB)
CD molecules [BR:amj04090]
 Proteins
  102566175 (PDGFRB)
SSDB
Motif
Pfam: PK_Tyr_Ser-Thr Pkinase Ig_3 I-set ig Ig_2 C2-set_2 V-set VEGFR-1-like_Ig-like TM_ErbB1
Other DBs
NCBI-GeneID: 102566175
NCBI-ProteinID: XP_014453078
UniProt: A0A151M7E4
Position
Un
AA seq 1097 aa
MPPPAPRGPFLLLLLLAGLPAVTPGSSQLHISPSDPEIILSLFGSSSLTCSGEAEVVWER
DRQPLATSLEQRDGVFHSTVTLHNLTGLDTGEYVCTYNHSLGWKQAERKAIYVYVPDPSL
VFLPSDSAESFIFTTGYTEATIPCRVTDPAFHVTLYEKKDDTPIPATYNRQQGFKGFFED
KTYICKATLDDREVDSDNYYIYSIQSSSSVNISISAVQTLVRRGENITVMCTVSGNEILN
FNWVYPGLETGKVVKLVTDFLPGSSHEIRSILIVQNAELEDAGSYICNVSEGFQQNMDMK
DITVSVVERGFVKFLSEWHTMVFAEVHKSPTIRVQLEAYPPPTIQWLKNNQPLTVSSSSD
FSITTRKLSETRYETNLNLVRVEPKEGGNYTIRASNDDDTQHLSFFLQVNVSAKVLALHE
NSTIKGEQKVLCAAEGMPQPEISWYTCSDHKGQCSLQPIQQLGNASEEMQLQTNATYHEA
LRVYHVHSTLQLRRVDEPLLLRCAVQNLLGTSHRDIKLVPHALSFKVIIISGVILGLLAL
IVTSLIILIILWRKKPRYEIRWKVIESVSSDGHEYIYVDPLQLPYDSSWEVPRDKLVLGR
TLGSGAFGRVVEATAHGLSHSQSSMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNI
VNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYSEKSRREAELYGNTFSEDRL
QRQTSVSVESDGGYMDMSKDDSLDYVPMSDMKGEIKYADIEASNYGTPYELDSYSPSAPE
RTDQATLINESPILSYTDLIGFSFQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICD
FGLARDIVRDSNYISKGNTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPY
PELPMNEQFYNAIKRGYRMSKPTHASDEIYDIMQKCWEEKFEIRPSFSQLVVLMGNLLMD
GYKKRYQQVDEEFLRSDHPAVVRTQPRIAGVNGAQHSSSASSILYTAVQQNGGDNDYIIP
LPDPKPDGADEIPQEASVSRASSTLNEANTSSTISCDSPLIPAQDEEPEPELEPEPELKP
GCQELSPGHHDTEESFL
NT seq 3294 nt   +upstreamnt  +downstreamnt
atgcctcctccagctccgaggggacccttcctcctactccttctcctcgcaggtctgccg
gcagtgactcccgggagcagccagctgcacatttcacccagcgaccccgaaatcatcctc
agcctcttcggcagctcctccctgacgtgctcgggggaggccgaggtggtctgggagcgg
gaccggcagcccctggccacgtcgctggagcagagagacggcgtcttccacagcacagtc
acgctccacaacctgacaggccttgacacgggggagtacgtgtgcacctacaaccactcc
ctgggctggaagcaggcggagaggaaagccatctatgtctacgtgccagacccctccctg
gtcttcctgcccagtgactccgcggagtcgttcatcttcaccacgggctacacggaggcc
accatcccgtgccgcgtgaccgaccctgccttccacgtcaccctgtacgagaagaaggac
gacaccccgatccctgccacctacaacaggcagcagggcttcaagggcttcttcgaagac
aagacctacatctgcaaggcgacgctggacgaccgggaggtggactcggacaactactac
atctacagcatccagtcttcttcgagcgttaacatctccatcagcgcggtgcagaccctg
gtgcggcgaggagagaacatcaccgtcatgtgcaccgtcagcggcaacgagatactcaac
tttaactgggtgtaccccggcctggagacgggcaaggtggtgaagctggtgacggacttc
ctgcccgggtccagccatgagatccgctccatcctcatcgtccagaacgcggagctggag
gatgcgggctcctacatctgcaacgtctcggagggcttccagcagaacatggacatgaag
gacatcactgtcagtgtggtcgagcgcgggttcgtgaagttcctctccgaatggcacacc
atggtgtttgccgaggtgcacaagagccccaccatccgggtgcagcttgaggcctacccc
ccacccaccatccagtggctcaagaacaaccagcccctgacggtgagcagcagcagcgac
ttctccatcaccacccggaagctgtcggaaaccaggtacgagacaaatctgaacctggtg
cgggtggaaccgaaagaggggggcaactacaccatccgggcatccaacgacgacgacacg
cagcacctgagcttcttcctgcaggtcaatgtctcagccaaagtgctggcgctgcacgag
aacagcaccatcaagggggagcagaaggtgctgtgcgccgccgagggcatgccgcagccg
gagatcagctggtacacctgcagtgaccacaaaggacaatgcagcctccagcccattcag
cagctgggcaatgcctctgaggagatgcagctgcagaccaatgccacgtaccacgaggcg
ctgcgggtgtaccacgtccacagcacactgcagctgcgccgggtggacgagcccctgctg
ctccggtgcgccgtgcagaacctgctgggcaccagccaccgcgacatcaagctggtgcca
cacgccttgtccttcaaggtgatcatcatctccggggtcatcctgggtctgctggcactc
atcgtcacctccctgatcatcctcatcatcctgtggaggaagaaacctcgctacgaaatc
cggtggaaggtgatcgagtcagtgagctccgacggacacgagtacatctacgtggacccc
ttgcaactcccctatgactccagctgggaggtccccagggacaagctggtgctggggcgc
acgctcgggtccggggcctttggccgtgtggtggaggcaacagcccacggcctgagccac
tcgcagtcctccatgaaggtggccgtgaagatgctcaagtctactgccaggagcagcgag
aagcaggccctgatgtcggagctgaagatcatgagccacctggggcctcacctgaacatc
gtcaacctgcttggagcctgcaccaaaggaggccccatctacatcatcacagagtactgc
cgctacggagacctggtggactacctgcaccgcaacaagcacaccttcctgcagtactac
agcgagaagagcaggcgggaggctgagctctacggaaacaccttcagtgaggaccggctc
cagaggcagacatccgtgtccgtcgagagcgatggaggctacatggacatgagcaaggat
gactccctggattacgtgcccatgtcagatatgaagggagagatcaagtacgctgacatc
gaggcctccaactatggcacgccgtacgagctggacagctactccccgtcagctcctgag
aggacagaccaggctaccttgatcaacgagtcccccattctcagctacacggacctcatc
gggttcagcttccaagtagccaatggcatggagttcctggcttccaaaaattgcgtgcac
cgtgacctggcagcaaggaacgtgctgatctgcgaggggaagctggtgaagatctgcgac
tttgggctggcccgggacattgtgcgagactctaactacatttccaagggcaacactttc
ttgcctttgaagtggatggcgcctgagagcatcttcaacaacctgtacacgaccctgagt
gacgtgtggtctttcgggatcctcctctgggagatattcacgctgggtgggacgccctac
cctgagctgcccatgaacgagcagttttacaacgccatcaagcggggctatcgcatgtcc
aagcccacgcatgcctctgacgagatctacgatatcatgcagaaatgctgggaagagaag
tttgagatcagaccttccttctcgcagctggtggtgctgatggggaacctgctgatggac
ggctacaagaagaggtaccagcaggtcgatgaggagttcctgaggagtgaccaccctgcc
gtcgtccgcactcagcccaggattgccggggtaaacggggcccagcacagctccagcgcc
agcagcatcctctatacggccgtgcaacagaacggaggggacaacgactacatcatcccc
ctgcccgaccccaagcccgacggagcagacgaaatcccccaggaagcttccgtcagccgg
gccagctctacactgaacgaggcaaacacctcatctacgatatcctgcgacagccccctg
atcccagcgcaggatgaggaaccagaaccagaactggaaccagaaccagaactgaagcca
ggctgccaggagctgagccctgggcatcacgacacggaggagagctttctgtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (5)   
   KEGG PATHWAY (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (10)   
   Pfam (10)   
All databases (34)   

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