KEGG T03087: 102566907

Alligator mississippiensis (American alligator): 102566907

Entry

102566907         CDS       T03087

Symbol

SCFD1

Name

(RefSeq) sec1 family domain containing 1

K19998

sec1 family domain-containing protein 1

Organism

amj Alligator mississippiensis (American alligator)

Brite

KEGG Orthology (KO) [BR:amj00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:amj04131]
    102566907 (SCFD1)
Membrane trafficking [BR:amj04131]
SNARE
  SNARE associated proteins
   Syntaxin-binding proteins
    102566907 (SCFD1)
Endoplasmic reticulum (ER) - Golgi transport
  Others
   Others
    102566907 (SCFD1)

SSDB

Motif

Pfam:

Sec1 cwf21

Other DBs

NCBI-GeneID:

102566907

NCBI-ProteinID:

XP_019344334

Position

AA seq 640 aa
MGAGRAAKMAAGIREKQAVALKRMLNFNVAPVKNSTGEPVWKVLIYDRFGQDIISPLLSV
KELRDMGITLHLLLHSDRDPIPDVPAVYFVMPTEENIDRMCQDLRNQLYESYYLNFISAI
SRSKLEDIANAALGANAVTQVAKVFDQYLNFITLEDDMFLLCNQNKELISYRAISRPDIT
DTEMETIMDTIVDSLFCFFVTLGAIPIIRCSRGTAAEMVAVKLDKKLRENLRDARNSLFT
GDTLGAGQFSFQRPLLVLVDRNIDLATPLHHTWTYQALVHDVLDFHLNRVNLEEPSGMEN
SPAGARPKKKNKKSYDLTALDKFWQKHKGSPFPEVAESVQQELESYRAQEDEVKRLKSIM
GIEGEDDGAISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKARKLDVYF
EYEEKIMSKSTLDKSLLDMISDPDAGTPEDKMRLFLIYYISSTQAPSEIDLEQYKKALTD
AGCNLAPLNYIKQWKAYTKMASAPTSYGNTTAKPLGLFSRVMNTGSQFVMEGVKNLVLKQ
QNLPVTRILDNLMEMKSNPETDDYRYFDPKMLRGSDSSVPRNKSPFQEAIVFVVGGGNYI
EYQNLVDYTKGRQGRHVLYGCSELFNATQFIKQLSQLGQK

NT seq 1923 nt +upstreamnt +downstreamnt
atgggggcggggcgagcggcgaagatggcggccgggatccgggagaagcaggcggtggct
ttgaagcgtatgttaaattttaatgttgctcctgttaaaaacagcacaggagaaccagta
tggaaggttctaatatacgacagatttggccaagatataatctctcctttgttgtcagtg
aaagagctgagagacatgggcatcactttacatctgcttctgcattctgatcgagatcct
attccagatgttcctgctgtatactttgtaatgccaactgaagaaaatattgacagaatg
tgccaggatcttcgaaatcagctttatgaatcttattatttaaatttcatttctgccatt
tcaagaagtaaactggaagatattgcaaatgctgccttaggtgctaatgcagtaacacaa
gttgctaaggtctttgatcaatatctcaattttataacattggaagatgatatgttccta
ttgtgcaatcaaaacaaagagctcatttcatatcgtgccattagcagaccagatataaca
gatactgaaatggagacaattatggacaccattgttgacagtcttttctgcttttttgtt
acacttggagctattcctataatcagatgttcaagaggaactgcagcagaaatggtggca
gtgaagttggataagaagctcagagagaacttaagagatgccagaaacagtcttttcaca
ggggatacacttggggctggacagttcagtttccaaaggcctttattagtccttgttgac
agaaatatagatttagcaactccacttcaccatacttggacataccaagccttagtgcat
gatgtactggatttccatttgaatagagtgaacctggaagaaccttcaggaatggaaaat
tctccagcaggagctagaccaaagaaaaaaaataaaaagtcatatgacttaactgcattg
gataaattttggcaaaagcacaaaggcagtccttttccagaagtagcagagtctgttcag
caagaactggaatcctacagagctcaagaagatgaagtcaaaaggcttaaaagtatcatg
ggaatagaaggggaggatgatggagcaataagtatgctttctgataatacagctaagcta
acttcagctgttagctctcttccagaacttcttgaaaagaagaggctcattgatcttcat
acaaatgttgcaactgctgttttggaacatataaaggcacgtaagctagatgtgtatttt
gaatacgaggaaaaaataatgagcaagtccactctggataaatctcttttggacatgata
tctgacccagatgcgggaactccagaagacaagatgcggttgtttcttatttattacata
agttcaactcaggcaccctcagagattgatttggagcagtacaaaaaggcattgacagat
gcagggtgtaatctggctcccttgaactacataaaacaatggaaggcttataccaagatg
gcttcagctccaacaagctatggaaacactacagctaaaccactgggtctgttttcacgt
gttatgaatactggatcacagtttgtaatggaaggagtaaagaacttggtattgaagcag
caaaacctaccagtcacacgtatcctggataaccttatggagatgaagtcaaatcctgaa
acagatgactacagatattttgatcccaagatgctgcgaggaagtgacagctcagttcca
agaaacaaaagtccattccaggaggcaattgtgtttgtagtgggaggaggcaactatatt
gaatatcaaaatcttgttgattacacaaagggcagacaaggcagacatgttttatatggc
tgtagtgaactttttaatgcgacacagtttataaaacagctgtcccaacttggtcaaaaa
taa

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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