KEGG   Alligator mississippiensis (American alligator): 102567999
Entry
102567999         CDS       T03087                                 
Symbol
RFC3
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
amj  Alligator mississippiensis (American alligator)
Pathway
amj03030  DNA replication
amj03410  Base excision repair
amj03420  Nucleotide excision repair
amj03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:amj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    102567999 (RFC3)
   03410 Base excision repair
    102567999 (RFC3)
   03420 Nucleotide excision repair
    102567999 (RFC3)
   03430 Mismatch repair
    102567999 (RFC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:amj03032]
    102567999 (RFC3)
   03036 Chromosome and associated proteins [BR:amj03036]
    102567999 (RFC3)
   03400 DNA repair and recombination proteins [BR:amj03400]
    102567999 (RFC3)
DNA replication proteins [BR:amj03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    102567999 (RFC3)
  DNA Replication Termination Factors
   ELG1-RFC complex
    102567999 (RFC3)
Chromosome and associated proteins [BR:amj03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    102567999 (RFC3)
DNA repair and recombination proteins [BR:amj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     102567999 (RFC3)
  Check point factors
   HRAD17(Rad24)-RFC complex
    102567999 (RFC3)
SSDB
Motif
Pfam: DNA_pol3_delta2 Rad17 AAA DNA_pol3_delta AAA_22 AAA_16 ABC_tran AAA_2 AAA_11 Sigma54_activ_2 DUF2247
Other DBs
NCBI-GeneID: 102567999
NCBI-ProteinID: XP_006265213
UniProt: A0A151MPG1
Position
Un
AA seq 356 aa
MSLWADKYRPVALARLDFHRDQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GAGVEKLRIEHQTITAPSKKKIEISTIASNYHLEVNPSDAGNSDRVVIQELLKTVAQSQQ
LETSTQRDFKVVLLTEVDKLTKDAQHALRRTMEKYMATCRLILCCNSMSKIIAPIQSRCL
AVRVPAPSIEDICHVLSSVCKKEGLTLPQDLARQLAEKSGRNLRKALLMCEACRVQQYPF
TSDQDIPETDWEVYLRETANAIVSQQTPQRLLEVRGRLYELLTHCIPPEIIMKGLLTELL
NNCDGQLKGEVAQMAAFYEHRLQLGSKAIYHLEAFVAKFMALYKKFMEDGLEDMTF
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgagcctctgggcggacaaataccggcccgtggcgctcgcgcgcctcgacttccaccgc
gaccaggcggcgcagctccgcaatctggttcagtgtggtgactttccccatctgttggtg
tatggaccgtctggagctgggaaaaaaactaggataatgtgtctcttaagagaactgtat
ggtgcaggagtggaaaagctaaggattgaacatcagactataacagcaccctctaaaaag
aaaattgaaattagcaccattgcaagtaattatcatctcgaagttaatccaagtgatgca
ggaaacagtgaccgtgtggtaattcaagaactgttgaagacagtagcacaatcccaacaa
cttgagacaagtactcaaagagattttaaagtggtgctgttgacagaagttgacaaactt
actaaagatgctcagcatgcactgcgaagaaccatggagaaatatatggccacctgcaga
ctcatcctgtgttgcaattccatgtcaaaaattattgcacctatacaaagtagatgtcta
gcagtacgagttcctgctcctagcattgaagacatctgtcatgtgttatccagcgtgtgt
aagaaagaaggcctgactcttcctcaggatctagctcgtcaacttgccgagaaatctggc
aggaatcttcgaaaggcgctgcttatgtgtgaggcctgcagagtgcaacagtatcctttc
acatctgatcaagacatccctgagacagactgggaagtatatctgagggagactgcaaat
gctattgtcagtcagcagactccccagaggctacttgaagttcgcggacggctttatgag
ctcttaacccactgcattcctcctgagattataatgaagggccttttgacagaacttcta
aataactgtgatggacaactaaaaggagaggttgcacaaatggctgctttctatgagcat
cgactgcaattgggcagcaaagctatttaccatctggaagcatttgtggcaaaatttatg
gcactttataagaagtttatggaggatggactagaagacatgactttttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (11)   
   Pfam (11)   
All databases (30)   

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