KEGG   Alligator mississippiensis (American alligator): 102568202
Entry
102568202         CDS       T03087                                 
Name
(RefSeq) tumor necrosis factor receptor superfamily member 16-like
  KO
K02583  tumor necrosis factor receptor superfamily member 16
Organism
amj  Alligator mississippiensis (American alligator)
Pathway
amj03265  Virion - Ebolavirus and Lyssavirus
amj04010  MAPK signaling pathway
amj04060  Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:amj00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03265 Virion - Ebolavirus and Lyssavirus
    102568202
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    102568202
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    102568202
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04050 Cytokine receptors [BR:amj04050]
    102568202
   04090 CD molecules [BR:amj04090]
    102568202
Cytokine receptors [BR:amj04050]
 Tumor necrosis factor receptors
  TNF receptor superfamily
   102568202
CD molecules [BR:amj04090]
 Proteins
  102568202
SSDB
Motif
Pfam: TNFR_c6 TNFR_16_TM Death bDLD3 TPR_21
Other DBs
NCBI-GeneID: 102568202
NCBI-ProteinID: XP_019352176
Position
Un
AA seq 427 aa
MLLFIHPSVPLAFYCILLFFISIFLFYSFIFTTVVGQTLQSLLPSPPAVPREVSLVSGSQ
GCESKHHTSLGECCQVCGPGFGVSVPCGSADTQCEPCRANVTFSSVSSATEPCQPCSTCA
EQAAELCTPTSDMVCASPCARGHYLQAGNGTGGQCLPCQVCPEGFGAVTPCGPAHDTVCS
ACPDGFYSEEKSSVMPCLPCQPQCNESKVMIRPCSPLSNTLCMDKDLQILKRGEGDPRKE
LPRMPPLPEDNSKNIIPVYCSILAAVVVGLLAYVAFKCWNTCKQKQQLAKARAGELGGSP
EGEKLHSDSGVFLDTHSLQEHHQLNKAPKAEPRLYINLPPHKQEEVEQLLESPSHSKDWR
YLASQLGYEDEDIDTFGRGEAPAHTLLSDWSAKEGATLEALCTALAGIERPDVVDNLTSP
AEASSVV
NT seq 1284 nt   +upstreamnt  +downstreamnt
atgcttctgttcatacatcccagtgtgccattagctttttattgtattttattatttttt
atttcgatttttttattttattcatttatttttacaacagtggtaggacagacgctgcaa
tcgctgctcccatctccaccggcggtgccaagagaggtctcgctggtgtcgggaagccaa
ggctgcgagagcaagcaccacacctccctgggcgaatgctgccaggtctgtggccctggc
ttcggggtgtccgtcccctgcggcagtgccgacacccagtgtgagccctgcagagcgaac
gtgacgttttcctcggtcagcagtgccacggagccgtgccagccatgctccacgtgcgcg
gagcaggcagctgagctgtgtacccccaccagcgacatggtgtgcgccagcccatgcgcc
cgcgggcactacctgcaggccggcaacgggaccggcggccagtgcctcccatgccaagtc
tgccccgagggctttggtgctgtgacgccgtgcgggccagctcacgacaccgtctgcagc
gcgtgcccggatggtttctactcggaggagaagagctcggtgatgccctgcctgccctgc
cagccgcagtgcaacgagagcaaggtgatgatccgcccctgcagcccgctctcgaacaca
ctgtgcatggacaaagacctgcagatcctgaagcgcggcgagggcgatccccgcaaggag
ctccccaggatgccgccgctgcccgaggacaacagcaagaacatcatccccgtgtactgc
tccatcctggccgccgtggtggtggggctgctggcctacgtggctttcaagtgctggaac
acctgcaagcagaagcagcagctggccaaagcccgggccggggagctggggggctccccc
gagggcgagaaactgcacagtgacagcggcgtcttcctggacacgcacagcttgcaggag
caccatcagctcaacaaggcgcccaaggccgagccccggctgtacatcaacctcccgccc
cacaagcaggaggaggtggagcagctgctggaaagccccagccacagcaaggactggcgc
tatctggccagccagctgggctacgaggacgaagacatcgacaccttcggcaggggcgaa
gccccggctcacaccctcctctcggactggtctgccaaggagggggccacgctggaggcc
ctgtgcaccgcgctggctggcatcgagcggccggacgtggtggacaacttgaccagtccg
gcagaggcgagctcggtggtgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (20)   

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