KEGG   Alligator mississippiensis (American alligator): 102568696
Entry
102568696         CDS       T03087                                 
Symbol
FXR1
Name
(RefSeq) FMR1 autosomal homolog 1
  KO
K15516  fragile X mental retardation protein
Organism
amj  Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:amj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:amj03019]
    102568696 (FXR1)
Messenger RNA biogenesis [BR:amj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     102568696 (FXR1)
   Factors involved in mRNA localization
    Other mRNA localization factors
     102568696 (FXR1)
   mRNA cycle factors
    Stress granule specific factors
     102568696 (FXR1)
SSDB
Motif
Pfam: FXMRP1_C_core FXR_C1 KH_9 Tudor_FRX1 FXR_C3 KH_1 Agenet KH_2 DUF4629
Other DBs
NCBI-GeneID: 102568696
NCBI-ProteinID: XP_014461702
Position
Un
AA seq 677 aa
MEELTVEVRGSNGAFYKGFIKDVHEDSLTVAFENNWQPERQVPFNEVRLPPPPDIKKEIG
EGDEVEVFSRANEQEPCGWWLAKVRMMKGEFYVIEYAACDATYNEIVTYERLRPVNQNKT
VKKNTFFKCTVEVPEDLRDACANENAHKDFKKAVGACRIFYHAETAQLIILSASEATVKR
VTILSDMHLRSIRTKLMLMSRNEEATKHLECTKQLAAAFHEEFVVREDLMGLAIGTHGSN
IQQARKVPGVTAIELEEDSGTFRIYGESAEAVKKARSYLEFVEDFIQVPRNLVGKVIGKN
GKVIQEIVDKSGVVRVRIEGDNENKLPREDGMVPFVFVGTKESIGNVQVLLEYHIAYLKE
VEQLRFERLQIDEQLRQIGMGFRPSSTRVPEKEKGYTTDESTLSSVQGSRSYSGRGRGRR
GPNYTSGYGTNSELSNPSETESERKDELSDWSLAGEDDRESRHQRDSRRRPGGRGRSVSG
GRGRGGPRAGKSSISSVLKDPDSNPYSLLDNTESDQTVDTDASESHHSANRRRRSRRRRT
DEDAVLMDGMTESDTASVNENGLDDSDKKPQRRNRSRRRRFRGQAEDRQPVTVADYISRA
ESQSRQRNSPKEMLPKNKKEMAKDVIEEHGPSEKAINGPADASGDEPSKPQPNPEETKST
VQEDGNNQEEAVLNGVS
NT seq 2034 nt   +upstreamnt  +downstreamnt
atggaggagctgacggtggaagtgcgcggctccaacggggccttctacaagggatttatc
aaagatgttcatgaggattccctcacagttgcatttgaaaacaattggcaaccagagcgc
caggttccttttaatgaagtcagattaccacctccccctgatatcaagaaagaaataggt
gaaggagatgaagtggaggttttctcacgagcaaatgagcaagaaccatgtggctggtgg
ctagcaaaagttcgaatgatgaaaggcgagttttatgtcattgaatatgctgcctgtgac
gctacttacaatgaaattgtcacgtatgaacgacttcgacctgtgaatcagaataaaact
gtcaaaaagaacaccttttttaagtgtacagtggaagttcctgaagatctcagagatgcg
tgtgctaatgaaaatgcacataaagattttaagaaagctgtaggagcttgtcggattttt
tatcatgctgaaactgctcaattaataatactgtctgctagcgaagcaacagtgaaaaga
gtgactatattaagtgacatgcatttgcgcagcattcgtaccaagctaatgctcatgtca
agaaatgaggaagccacaaaacacttagaatgtacaaaacaacttgcagcagcatttcat
gaggagtttgtcgtcagagaagatttaatggggcttgcaatagggacgcatggtagtaac
atacagcaagccaggaaggtcccaggagttacagcaatcgagctagaggaagatagtggt
actttcaggatctatggagagagtgctgaggcagtaaaaaaggctagaagttacttggaa
tttgtggaggattttattcaagttcccagaaatcttgttggaaaagttattggaaaaaat
ggaaaagtgattcaggagatagtagacaagtctggagtcgtcagggtgagaattgaaggt
gacaatgaaaacaaactgcccagggaagatggaatggtcccgtttgtatttgttggcact
aaagaaagcattggaaatgtccaggttcttttagaataccacattgcctacctgaaggaa
gtagaacagttaaggtttgagaggcttcagattgatgaacagctgcgtcagattggcatg
ggtttcagaccttcttccaccagagttcctgaaaaggaaaagggctacaccacggatgaa
agtaccctctcctctgtacaaggctctaggtcatatagtggaagagggagaggtcgcaga
ggcccaaattatacttcaggttatggtacgaactctgagctttctaatccctctgaaaca
gagtctgagaggaaagatgaactgagtgactggtcattggcgggagaggatgacagggag
agcagacatcagcgtgacagcagaagacgtcctggaggaagaggacgcagtgtttctgga
ggtcgtggacgtggtggaccgcgggctggcaagtcctccatcagctctgtgctgaaagat
cctgacagcaacccatacagcttacttgataacacagaatcagaccagactgtagacacc
gatgccagtgaatctcatcacagtgctaaccgccgcaggcgatcacgcaggcgaagaact
gatgaagatgctgttctaatggatggaatgacagagtctgacactgcttctgttaatgag
aatggtttagatgatagtgacaaaaaaccccagcgacgcaatcgtagtcgcaggcgtcgc
ttcaggggtcaggcagaagatagacagccagtcacagtagctgattatatatcacgagct
gaatctcagagtagacagaggaactccccaaaagagatgctgcccaaaaacaagaaagaa
atggcaaaagatgtgattgaagaacatggcccttctgaaaaggcaataaacggaccagct
gatgcttctggggatgaaccttctaaaccacagcctaatcctgaagaaacgaaaagtact
gtacaagaagatggaaataatcaggaagaagcagtgctgaatggtgtttcataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (9)   
   Pfam (9)   
All databases (28)   

Download RDF
DBGET integrated database retrieval system