KEGG   Alligator mississippiensis (American alligator): 102568859
Entry
102568859         CDS       T03087                                 
Symbol
TPR
Name
(RefSeq) translocated promoter region, nuclear basket protein
  KO
K09291  nucleoprotein TPR
Organism
amj  Alligator mississippiensis (American alligator)
Pathway
amj03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:amj00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102568859 (TPR)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:amj03019]
    102568859 (TPR)
Messenger RNA biogenesis [BR:amj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     102568859 (TPR)
SSDB
Motif
Pfam: TPR_MLP1_2 ERM_helical
Other DBs
NCBI-GeneID: 102568859
NCBI-ProteinID: XP_014451512
Position
Un
AA seq 2369 aa
MAAVLQQVLERAELAKLPKLVQGKLERFLADQQSEIDGLRASHERFRVDSEQQYFEVEKR
LAQSQERLVNQTQECQTLRQELNKLNEQLKSLSEKSKELEAAQDRSAAIQSKLTREKEEL
EAEKRDLVRTSERRSQEVEHLNEDVKRLNDKLMEANAEKVKLQLKLDELETSDVSVKYRE
KRFEQEKELLQNQNNWLNAELKAKTDELLHIAREKGNEILELKCSLENKKEEVSRMEEQV
SGLKQTNENLQKHVEDLLNKLKEAKDQQSGMEGRFHNELNAHIKLSNLYKSAADDSEAKS
DELTRAVEELHKLLKEAGEANKATQDHLAEVEESKAAMEKELREKISKLEKELVNANELL
SATKRKGAILSEEELAAMSPTAAAVAKVVKPGMKLTELYNAYVETQDQLLLEKLENKRIN
KYLDEIVQEVEAKAPILKRQREEYERSQKAVASLSAKLEQAMKEIQRLQGDTDKANKHAS
VLERENQRLEIQVKDLSQQIRVLLMELEEARGNHVIRDEEVSSADISSSSEVITQHLVSY
RNIEELQQQNQRLLVALRELGEAREKEEQETTSSKISELQGQLEEALNELEKLREARHLQ
VQLVDSIVRQRDMYRILLAQTTGVVIPVQASGMLPEEISFASTPKRSIMPQAMSTPAPVS
MTESIEAVEAKAALKQLQEIFENYKKEKAENDKLLNEQNEKLQEQVSDLRSQNAKMSTQL
EFASKRYEMLQDNVESYRREITSLHERTQKLTATTQKHEQIINTMTQDLRGANEKLAVAE
VRAENLKKEKDILKMSEVRLTQQRESYLAEQRGQNLLLTNLRAIQAILERSETETKQRLS
NQIEKLEREISQLKKKLESEVEQRHSLTKNQDVHLLDLKRQLETETSRHLNTKELLKNAQ
KEISTLKQQLNNTEALLASQSSQRAPGKGQTSTNEDVDDLVSQLRQAEEQVNDLKERLKT
TSSNVEQYRAMVLSLEESLNKEKQVTEEVRATVEVRLKDSSEYQAQLEKKLMEAEKEKQE
LQDEKRKAVESMEQQLSELKKSLTAVQSEVQEALQRASTALNNEQQARRDCQEQAKIASQ
AQNKYERELMLHAADVEALQAAKEQVSKNAAVRQQLEEAAQKAESALLECKASWEERERM
LKDEVSKLVSRSEDLEKQNRLLHEQLETLSDKMVTSVKEANPSALNVSLNEEGKSQEQIM
EILRFIRREKEIAETRFEVAQVESLRYRQRVEHLEKELQELQDSLNAEREKVQVTARTIA
QHEELMKKTETMNVLIETNKMLREEKERLEQELQQMQAKVRKLEADILPLQESNAELSEK
SGMLQAEKKLLEEDVKRWKARTQHLLSQQKDTDVEEYRKLLSEKEANTKRIQQMSEETGR
LKAEIARANASLTTSQNLVQTLRDELTKIRGEKDNLQKELDVKVADIQEKVKTITQVKKI
GRRYKTQYEELKAKHDKVVAETSAQSSAEQQQEQQASVQEVQELKESLSQADVKTKSLES
QIECLQKTIAEKESEARSLQEQISQVQLELTRLHQDLQERTTQEEQLKQQITEKEEKTKK
TLLAAKQKIAQLAGTKEQLTKENDEWKQKSIALEEQKTELEVRMSALKSQYEGRICRLER
ELREQQERHHEQRDEPPESTNKVSEQQRQITLKSTPASGERGIASTSDPPTANIKPTPVV
STPSKVTAAAIPGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVETQEAMQSEGPV
EHVPVFGSTSGSVRSTSPNVQTSLSQPILTVQQQTQATAFVQPTQQSHPQIEPANQEPSP
TIVEVVQSSQIERPSTSTAVFGTVSATPSSSLPKRPREEEEDSTVENSEQISEETVDVPL
PKKLRGIQRVEPEEEVTAEESTDGEVETQTYNQDSQDSIGEGVTQGEYTPMEDSEETSQS
IPIDIGPLQPDQQNTSSSQECQSKRDDVIVIDSDDEEDDDEENEGEQEDYEDEEEDDEDD
DEDAGMGDEGDDSNEGTGSADGNDGYEADEAEGADGTDPGTETEESMGGGESNQRAADSQ
NSGEGSTSAAESTFSHESSREQQPTSASERQAPRPPQSPRRPSHTLPPRLTIHAPPQELG
PPVQRIQMTRRQSVGRGLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPHRTDGFAEAIHS
PQVAGVPRFRFGPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEEESGGRSVPTTP
LQVAAPVTVFTESTAADASEHASQSVPMVTTSTGNLSTTTESGAGDDGDEVFAEAESEGI
TSEAGLEIDSQQEEESVQASDESDLPSTSQDPPSSSSADTSSHQPKPFRRVRLQPPTLRT
GVRGRHFNRQRGVTHAMGGRGGLNRGNIS
NT seq 7110 nt   +upstreamnt  +downstreamnt
atggcggcggtgctgcagcaggtcttggagcgggccgagctggccaagctccccaagctg
gtgcaggggaagctggagcgcttcctggccgaccagcagagcgagatcgacgggctgcgg
gccagccacgagcgcttccgcgtggacagcgaacaacaatactttgaagttgaaaaacgt
ctggctcagagtcaggaaagacttgtaaatcagacacaagaatgtcaaaccctccgtcag
gagttaaataaactaaatgaacagttgaagtccctgagtgagaaaagcaaagaactagag
gctgctcaggatcgcagtgctgccatccagagtaagcttaccagagaaaaagaagaattg
gaagctgaaaaaagagatttagttcgaacgagtgaaaggcgatctcaagaagttgaacat
ttaaatgaggatgttaaacgtttaaatgacaaactcatggaagcaaatgcagaaaaagtt
aaacttcagttaaagctagatgaacttgaaacctcagatgtctctgtgaagtaccgtgag
aaaaggttcgagcaagaaaaagaattgttgcagaatcagaacaattggctgaatgcagag
ttgaaggctaaaacagatgaactcttgcatattgccagggaaaagggaaatgaaatcttg
gagctgaaatgtagcctggagaacaaaaaagaggaggtttctagaatggaggaacaagta
agtggtttaaaacaaacaaatgaaaatctacagaaacatgtggaagatcttttgaataaa
ctaaaggaggcaaaagaccagcaatctggtatggagggaagattccataatgagctaaat
gcccacataaaattatctaacttgtataagagtgccgcagatgattcagaagcaaagagt
gatgaattgacacgagcagtggaggaactgcataaacttttgaaagaagcaggtgaagct
aacaaggccacacaggatcatttggctgaggtggaggagtcaaaagctgcaatggaaaaa
gaactgagggagaagattagtaagctagagaaagagctagtgaatgcaaatgaattactt
tctgctacaaaacgtaaaggagccattctctctgaggaggagctagcagccatgtctcct
actgctgcagcagttgctaaagtagtaaaaccaggaatgaaattgactgagttgtacaat
gcatatgtagaaacacaggatcagttgcttctggagaagctggagaataagagaattaat
aaatacttggatgaaatagtgcaggaagttgaagctaaagcaccaattttaaaacgtcag
cgtgaagagtatgaacgctcgcaaaaagctgtagccagtctgtctgcaaagcttgaacaa
gctatgaaggaaattcagcgattgcagggggacactgataaagccaacaagcatgcctct
gtccttgaaagagagaatcaaaggctagaaatacaagtgaaagacctttcacagcagatt
agagtgcttttgatggaacttgaggaagccagaggcaatcatgtgattcgtgatgaagaa
gtgagctctgctgatatcagtagctcctcagaagtgataacccagcatctagtctcttac
agaaatattgaagaacttcagcagcagaatcaacgtctcctggtggctcttcgggaattg
ggggaagccagagaaaaagaagaacaggaaacaacttcttctaaaatttctgagctgcag
ggtcaacttgaggaagctctcaatgagctagagaagttgcgtgaagcacgtcatcttcaa
gtgcagctagttgattctattgttcgtcagcgtgatatgtatcgtatactgttggcacag
accacaggagttgtcattccagtgcaagcttcaggtatgttaccagaagagatatccttt
gcatccaccccaaaacgttcaataatgcctcaggccatgtcaactcctgctccagtatca
atgactgagtccatagaggcagtggaagctaaagctgcacttaaacagttgcaggaaatt
tttgagaactacaaaaaagaaaaggcagaaaatgacaaattgctaaatgaacagaatgaa
aaacttcaggaacaagtctcagacttgcgatcacagaatgctaagatgtctacacaactt
gaatttgcttccaaacgttatgagatgctgcaggataatgttgaaagttatcgtcgagaa
ataacatctctacatgaaagaacccaaaagcttacggcaacaactcagaaacatgagcaa
ataattaataccatgacgcaggacttgagaggagctaatgaaaaacttgcagtggcagag
gtaagagcagaaaacttgaaaaaagagaaggatattttgaagatgtctgaagttcgcctg
actcagcaacgagaatcttatttagccgaacaaaggggacagaatttgctgctaactaat
ctacgagctattcaggcaatattggagagatccgagacggagactaaacaaaggctcagt
aatcaaatagagaaactagaacgtgagatatcccagctaaagaaaaaactggaaagtgag
gtggaacaaaggcattcacttaccaaaaatcaagatgttcatctgttggatcttaaaaga
cagcttgagactgaaacaagccgtcacctgaacacgaaggagcttttgaaaaatgcccag
aaagagatatccacactgaagcagcagctcaataatactgaagccctgctagcttcgcag
tcatcacagagagctcctgggaaagggcagactagtaccaatgaggatgtggatgatctt
gtaagtcagctaaggcaagctgaggaacaagttaatgatctgaaagaaagattgaagact
acttctagtaatgtggaacagtacagagctatggtccttagtcttgaagaatcccttaat
aaggagaaacaggtgacagaagaagttcgtgcaactgttgaagtccgtctaaaggactcc
tctgagtatcaggcccagctggaaaagaagctgatggaggcagagaaggaaaaacaagaa
cttcaagatgagaaacgtaaagctgtagagagcatggagcaacagctgtctgaactgaag
aagagcctcactgctgtgcaatctgaagtccaggaagctcttcagagggccagcacagcc
ttaaataatgaacagcaagccagacgagactgtcaggaacaagcaaagatagcttcacaa
gctcaaaataaatacgagcgggaattgatgcttcatgcagctgatgttgaagcgctacag
gctgctaaagagcaagtctctaagaatgcagctgtaaggcagcaattggaggaagctgct
cagaaagctgaatctgcattactggagtgcaaagcttcatgggaagagcgggaaagaatg
ttaaaggatgaagtgtcaaaacttgtctctcgcagtgaagacttagaaaaacaaaataga
ttattacatgaacagctggaaactctgagtgataagatggtgacatcggtgaaggaagca
aacccaagtgcattgaatgtttctctcaatgaagaaggcaaatcacaggaacaaatcatg
gaaattcttagatttatacgccgggagaaggagattgctgaaactaggtttgaggtggcc
caggtggaaagcttgcgttaccgtcagagggtggaacacctggaaaaggagctccaagaa
ctgcaagacagtctgaatgctgagagagagaaggtgcaggtaactgcaaggacaatagct
cagcatgaggaactaatgaaaaagactgaaaccatgaatgttttaatagaaacaaacaaa
atgctgcgggaagagaaggagaggcttgaacaagagttgcaacaaatgcaagcaaaggtg
cgtaaactagaagcggatatcttgcctttacaagaatctaatgctgagctgagtgagaaa
agtggaatgctgcaggcagagaagaaactactggaagaagatgttaaacgttggaaagcc
aggacccagcatttactgagccaacaaaaagacactgatgttgaagaatatcggaagctc
ctttcagagaaggaggcaaacaccaaacgcatacagcagatgagtgaagaaacagggagg
cttaaagcagaaatagcaagagctaatgcatccctgaccacaagccagaatcttgttcag
actctcagggatgagctaactaaaataagaggtgaaaaggataatcttcagaaagagcta
gacgtgaaagtggctgacatacaagaaaaagtcaagactataacacaggttaagaaaatt
gggcgcagatacaagactcagtatgaagagctgaaagcaaagcatgacaaggtggtggct
gagacatcagctcagtcatctgcagaacaacaacaagaacagcaggcctctgttcaggaa
gtacaagagttgaaagaatctcttagtcaggctgacgtgaagacaaaatccttggaaagt
cagatagaatgtttacaaaagactatagcagagaaggagagtgaagctaggagtctacag
gaacagatttcacaagtacagctggaacttactcgtcttcatcaagatctgcaagagaga
actactcaggaagaacagctcaagcaacagataactgagaaggaagagaagactaagaag
actctgctggctgccaagcagaaaatagcgcagttggctggtacaaaagaacagctaaca
aaagaaaatgatgagtggaaacaaaagagcattgcattagaagagcagaagactgaattg
gaggtgcggatgagtgctctcaaatcgcagtatgaaggtcgtatatgtcgactggagaga
gagctaagagagcaacaagagaggcaccatgaacagagagatgaaccaccagagtccact
aataaggtttcagaacagcagaggcagatcacactcaaatctacaccagcttcaggtgaa
agaggaattgctagcacttcagatcctccaacagcaaacattaagccaactcctgttgtg
tcaactccaagtaaagtaactgctgctgcaatacctgggaataagtctactccacgagct
agtatccgtccgatggttactcctgctactgtaactaatccaactactactccaacagct
acagttatgcctacaacacaggtggaaacccaagaagctatgcagtcagaaggacctgtg
gaacatgttccagtctttggaagtactagtgggtctgtacgttctactagtcctaacgtc
cagacatctctctcccaacccatcttaactgtacagcaacagactcaagctacagctttt
gtgcagccgactcagcagagtcatcctcagattgagccagccaatcaagaaccatcccct
accattgtggaagttgtacagagctcacagattgaaaggccctccacttctacagcagtg
ttcggtacagtttcagctaccccaagttcttcattacccaagcgtccacgagaggaagaa
gaggacagcacagtagaaaactctgaacaaatttcagaagagacagtggatgttcctctt
ccaaagaaactgaggggtatacaaagagtggaacccgaggaggaagtgacagcagaggag
agcactgacggtgaggtagaaactcaaacatataaccaagattcccaagattccattgga
gaaggggtgacacagggggaatacactcccatggaagacagtgaagaaacttctcagtct
atcccaatagatattggacctcttcaaccagatcagcagaatacctcgtcatcccaggag
tgtcagtccaagcgagatgatgttatagtgattgacagtgatgatgaagaggatgatgat
gaagaaaatgaaggcgagcaagaagattatgaggatgaagaagaggatgacgaagatgat
gatgaagatgcaggcatgggagatgaaggtgacgatagtaatgaaggaacaggcagtgct
gatggtaatgatggatatgaagctgatgaggctgagggtgctgatggtacagatcctgga
actgaaactgaagagagcatgggaggaggtgaaagcaaccagagagcagcagactcacaa
aacagtggagaagggagtacaagtgctgcagagtctactttctcccatgaaagttcaaga
gaacagcaaccaacatctgcctctgagaggcaggcccctcgaccaccacagtcaccacgc
agaccttcacacacattacctccacgcttaactattcatgctccaccccaagagctagga
cctccagtacagagaatccagatgactaggagacagtccgtgggacgtggactacaactg
actcctggcatagggggtatgcagcaacacttctttgatgatgaagacaggacagtccca
agtactccaacgcttgtggtaccacatcgtacagatggatttgcagaagctattcattcc
ccccaggttgctggagttcctagatttaggtttgggcccccagaagatatgccacagacc
agctctagccactcagatcttggtcagcttgcatcacaaggaggtttaggaatgtatgaa
acaccactcttccttgcccatgaagaagaatctggtggccgcagcgtcccaacaactcct
ctgcaggtagcagcaccagtaactgtttttacagaaagcacagcagctgatgcttcagag
catgcttctcagtctgttccaatggttacaacgtccactggcaatttatccactactaca
gagtctggagcaggtgatgatggagatgaagtttttgcagaggcagaatctgaaggaatt
acttcagaagctggtctagaaatagatagccagcaagaggaggaatctgttcaagcatct
gatgagtcagatcttccttccactagtcaggatcctccttccagctcttcagcagacaca
agcagtcatcagcccaagccattccggcgtgtcaggcttcagccaccaacattgagaact
ggtgttcgtggtcgtcattttaacagacaaaggggtgtgactcatgcaatgggaggccga
ggaggccttaacagaggcaatatcagttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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